RNA–Protein interactions for RNA: ENST00000514493.5

SSBP2-218, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene SSBP2, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-218ENST00000514493 C2CD5Q86YS7 1000 aa23.93■■□□□ 1.42
SSBP2-218ENST00000514493 DNAJC2Q99543 621 aaKnown RBP23.93■■□□□ 1.42
SSBP2-218ENST00000514493 KIAA1551Q9HCM1 1747 aa23.93■■□□□ 1.42
SSBP2-218ENST00000514493 MYO5AQ9Y4I1 1855 aaKnown RBP23.93■■□□□ 1.42
SSBP2-218ENST00000514493 SLX4Q8IY92 1834 aa23.93■■□□□ 1.42
SSBP2-218ENST00000514493 DOCK2Q92608 1830 aa23.93■■□□□ 1.42
SSBP2-218ENST00000514493 XDHP47989 1333 aa23.93■■□□□ 1.42
SSBP2-218ENST00000514493 PPEF1O14829 653 aaPredicted RBP23.93■■□□□ 1.42
SSBP2-218ENST00000514493 CHMLP26374 656 aa23.93■■□□□ 1.42
SSBP2-218ENST00000514493 ALDH1B1P30837 517 aa23.93■■□□□ 1.42
SSBP2-218ENST00000514493 UQCRFS1P1P0C7P4 283 aa23.92■■□□□ 1.42
SSBP2-218ENST00000514493 KCNJ4P48050 445 aa23.92■■□□□ 1.42
SSBP2-218ENST00000514493 STYK1Q6J9G0 422 aa23.92■■□□□ 1.42
SSBP2-218ENST00000514493 SLC51AQ86UW1 340 aa23.92■■□□□ 1.42
SSBP2-218ENST00000514493 H0YIN7 160 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 EDC3Q96F86 508 aaKnown RBP23.91■■□□□ 1.42
SSBP2-218ENST00000514493 C22orf23Q9BZE7 217 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 PAG1Q9NWQ8 432 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 NDUFB9Q9Y6M9 179 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 ZNF804BA4D1E1 1349 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 POLD1P28340 1107 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 MCAMP43121 646 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 SCARF1Q14162 830 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 IPO9Q96P70 1041 aaKnown RBP23.91■■□□□ 1.42
SSBP2-218ENST00000514493 FSD1Q9BTV5 496 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 ANKIB1Q9P2G1 1089 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 LEMD3Q9Y2U8 911 aa23.91■■□□□ 1.42
SSBP2-218ENST00000514493 DDRGK1Q96HY6 314 aa23.89■■□□□ 1.42
SSBP2-218ENST00000514493 IRS2Q9Y4H2 1338 aa23.89■■□□□ 1.41
SSBP2-218ENST00000514493 DUOX1Q9NRD9 1551 aa23.89■■□□□ 1.41
SSBP2-218ENST00000514493 WTIPA6NIX2 430 aaPredicted RBP23.88■■□□□ 1.41
SSBP2-218ENST00000514493 GOLIM4O00461 696 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 GPSM2P81274 684 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 SP8Q8IXZ3 490 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 ZNF622Q969S3 477 aaKnown RBP eCLIP23.88■■□□□ 1.413e-6■■□□□ 13.5
SSBP2-218ENST00000514493 ESYT1Q9BSJ8 1104 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 PODXL2Q9NZ53 605 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 ATP6V0A2Q9Y487 856 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 HIP1O00291 1037 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 CHRNA5P30532 468 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 BCAMP50895 628 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 KBTBD3Q8NAB2 608 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 DIAPH3Q9NSV4 1193 aa23.88■■□□□ 1.41
SSBP2-218ENST00000514493 BRCA1P38398 1863 aaKnown RBP23.88■■□□□ 1.41
SSBP2-218ENST00000514493 KLRK1P26718 216 aa23.87■■□□□ 1.41
SSBP2-218ENST00000514493 FKBP4Q02790 459 aaKnown RBP eCLIP23.87■■□□□ 1.41
SSBP2-218ENST00000514493 ZAP70P43403 619 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 GYG1P46976 350 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 RBM25P49756 843 aaKnown RBP23.86■■□□□ 1.41
SSBP2-218ENST00000514493 RASGRF1Q13972 1273 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 CAVIN4Q5BKX8 364 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 PI16Q6UXB8 463 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 TICAM2Q86XR7 235 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 SNRKQ9NRH2 765 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 ATP2B4P23634 1241 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 CNKSR1Q969H4 720 aa23.86■■□□□ 1.41
SSBP2-218ENST00000514493 NSFL1CQ9UNZ2 370 aaKnown RBP23.86■■□□□ 1.41
SSBP2-218ENST00000514493 COL1A1P02452 1464 aaPredicted RBP23.85■■□□□ 1.41
SSBP2-218ENST00000514493 REC8O95072 547 aa23.85■■□□□ 1.41
SSBP2-218ENST00000514493 PRPF40BQ6NWY9 871 aaKnown RBP23.85■■□□□ 1.41
SSBP2-218ENST00000514493 C15orf52Q6ZUT6 534 aaKnown RBP23.85■■□□□ 1.41
SSBP2-218ENST00000514493 KLHL34Q8N239 644 aa23.85■■□□□ 1.41
SSBP2-218ENST00000514493 FAM84BQ96KN1 310 aaPredicted RBP23.85■■□□□ 1.41
SSBP2-218ENST00000514493 ANTXR1Q9H6X2 564 aa23.85■■□□□ 1.41
SSBP2-218ENST00000514493 HMG20BQ9P0W2 317 aa23.85■■□□□ 1.41
SSBP2-218ENST00000514493 PPP1R1BQ9UD71 204 aaPredicted RBP23.85■■□□□ 1.41
SSBP2-218ENST00000514493 GGA1Q9UJY5 639 aa23.85■■□□□ 1.41
SSBP2-218ENST00000514493 UFL1O94874 794 aa23.84■■□□□ 1.41
SSBP2-218ENST00000514493 FBXO33Q7Z6M2 555 aa23.84■■□□□ 1.41
SSBP2-218ENST00000514493 GNL3LQ9NVN8 582 aaKnown RBP23.84■■□□□ 1.41
SSBP2-218ENST00000514493 VPS37DQ86XT2 251 aa23.83■■□□□ 1.41
SSBP2-218ENST00000514493 SPATA5Q8NB90 893 aa23.83■■□□□ 1.41
SSBP2-218ENST00000514493 FHDC1Q9C0D6 1143 aaPredicted RBP23.83■■□□□ 1.41
SSBP2-218ENST00000514493 ZBTB22O15209 634 aa23.83■■□□□ 1.4
SSBP2-218ENST00000514493 SGSM2O43147 1006 aa23.83■■□□□ 1.4
SSBP2-218ENST00000514493 RUFY2Q8WXA3 655 aa23.83■■□□□ 1.4
SSBP2-218ENST00000514493 RAD50Q92878 1312 aa23.83■■□□□ 1.4
SSBP2-218ENST00000514493 CYP2E1P05181 493 aaPredicted RBP23.82■■□□□ 1.4
SSBP2-218ENST00000514493 TTF1Q15361 905 aaPredicted RBP23.82■■□□□ 1.4
SSBP2-218ENST00000514493 CWC27Q6UX04 472 aaKnown RBP23.82■■□□□ 1.4
SSBP2-218ENST00000514493 IL25Q9H293 177 aa23.82■■□□□ 1.4
SSBP2-218ENST00000514493 MED23Q9ULK4 1368 aa23.82■■□□□ 1.4
SSBP2-218ENST00000514493 SEMA3EO15041 775 aa23.81■■□□□ 1.4
SSBP2-218ENST00000514493 HIBADHP31937 336 aaKnown RBP23.81■■□□□ 1.4
SSBP2-218ENST00000514493 NMIQ13287 307 aaPredicted RBP23.81■■□□□ 1.4
SSBP2-218ENST00000514493 TXNRD3Q86VQ6 643 aa23.81■■□□□ 1.4
SSBP2-218ENST00000514493 TBC1D16Q8TBP0 767 aa23.81■■□□□ 1.4
SSBP2-218ENST00000514493 TMX4Q9H1E5 349 aaPredicted RBP23.81■■□□□ 1.4
SSBP2-218ENST00000514493 MAST2Q6P0Q8 1798 aa23.8■■□□□ 1.4
SSBP2-218ENST00000514493 PDS5AQ29RF7 1337 aaKnown RBP23.8■■□□□ 1.4
SSBP2-218ENST00000514493 GOLGB1Q14789 3259 aaKnown RBP23.8■■□□□ 1.4
SSBP2-218ENST00000514493 LRRFIP1Q32MZ4 808 aaKnown RBP23.8■■□□□ 1.4
SSBP2-218ENST00000514493 FAM227BQ96M60 508 aa23.8■■□□□ 1.4
SSBP2-218ENST00000514493 POLLQ9UGP5 575 aa23.8■■□□□ 1.4
SSBP2-218ENST00000514493 SNED1Q8TER0 1413 aa23.79■■□□□ 1.4
SSBP2-218ENST00000514493 CCDC88AQ3V6T2 1871 aa23.79■■□□□ 1.4
SSBP2-218ENST00000514493 A0A0D9SFI3 127 aa23.79■■□□□ 1.4
SSBP2-218ENST00000514493 OLFM4Q6UX06 510 aa23.79■■□□□ 1.4
SSBP2-218ENST00000514493 MPNDQ8N594 471 aa23.79■■□□□ 1.4
SSBP2-218ENST00000514493 NLGN2Q8NFZ4 835 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms