RNA–Protein interactions for RNA: ENST00000513819.1

NIPBL-207, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-207ENST00000513819 FAM35AQ86V20 835 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 TMEM102Q8N9M5 508 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-207ENST00000513819 ASAP3Q8TDY4 903 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 TNFRSF25Q93038 417 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 NXPE3Q969Y0 559 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 PBX4Q9BYU1 374 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 AVENQ9NQS1 362 aaPredicted RBP6.98□□□□□ -1.29
NIPBL-207ENST00000513819 GGT7Q9UJ14 662 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 NAGPAQ9UK23 515 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 SLC6A14Q9UN76 642 aa6.98□□□□□ -1.29
NIPBL-207ENST00000513819 IGSF3O75054 1194 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 FBXO24O75426 580 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 ARAFP10398 606 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 ADH6P28332 368 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 PCSK7Q16549 785 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 RNFT1Q5M7Z0 435 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 CEP135Q66GS9 1140 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 HS2ST1Q7LGA3 356 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 FCHSD1Q86WN1 690 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 COL25A1Q9BXS0 654 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-207ENST00000513819 BHLHE41Q9C0J9 482 aaPredicted RBP6.97□□□□□ -1.29
NIPBL-207ENST00000513819 RBSNQ9H1K0 784 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 PCDHGB7Q9Y5F8 929 aa6.97□□□□□ -1.29
NIPBL-207ENST00000513819 IGF1RP08069 1367 aa6.96□□□□□ -1.29
NIPBL-207ENST00000513819 A0A096LPE4 126 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 A0A1W2PPZ6 126 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 XRCC5P13010 732 aaKnown RBP6.96□□□□□ -1.3
NIPBL-207ENST00000513819 MAP2K3P46734 347 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 PTPN12Q05209 780 aaKnown RBP6.96□□□□□ -1.3
NIPBL-207ENST00000513819 NAALADL2Q58DX5 795 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 PERM1Q5SV97 790 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 NPAS3Q8IXF0 933 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 PLD4Q96BZ4 506 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 C8orf37Q96NL8 207 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 POP1Q99575 1024 aaKnown RBP6.96□□□□□ -1.3
NIPBL-207ENST00000513819 GGA1Q9UJY5 639 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 NSFL1CQ9UNZ2 370 aaKnown RBP6.96□□□□□ -1.3
NIPBL-207ENST00000513819 ERBB4Q15303 1308 aa6.96□□□□□ -1.3
NIPBL-207ENST00000513819 F6X3S4 739 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 TERTO14746 1132 aaKnown RBP6.95□□□□□ -1.3
NIPBL-207ENST00000513819 SMNDC1O75940 238 aaKnown RBP eCLIP6.95□□□□□ -1.3
NIPBL-207ENST00000513819 RACK1P63244 317 aaKnown RBP6.95□□□□□ -1.3
NIPBL-207ENST00000513819 ELMSAN1Q6PJG2 1045 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 ADAMTSL4Q6UY14 1074 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 TPTE2Q6XPS3 522 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 USP48Q86UV5 1035 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 MICALL1Q8N3F8 863 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 MDFIQ99750 246 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 TRIM56Q9BRZ2 755 aaKnown RBP6.95□□□□□ -1.3
NIPBL-207ENST00000513819 TGIF2Q9GZN2 237 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 SMG9Q9H0W8 520 aaKnown RBP6.95□□□□□ -1.3
NIPBL-207ENST00000513819 ACBD3Q9H3P7 528 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 CCSER2Q9H7U1 834 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 COPRSQ9NQ92 184 aa6.95□□□□□ -1.3
NIPBL-207ENST00000513819 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.95□□□□□ -1.3
NIPBL-207ENST00000513819 ADARB2-AS1A8MUL3 147 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 VSIG8P0DPA2 414 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 ITPKAP23677 461 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 TNNI2P48788 182 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 MAP3K10Q02779 954 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 CCDC85BQ15834 202 aaPredicted RBP6.94□□□□□ -1.3
NIPBL-207ENST00000513819 LPIN3Q9BQK8 851 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 MUC3BQ9H195 1237 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 ZNF576Q9H609 170 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 USP35Q9P2H5 1018 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 DDX41Q9UJV9 622 aaKnown RBP6.94□□□□□ -1.3
NIPBL-207ENST00000513819 PPM1HQ9ULR3 514 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 TRIM33Q9UPN9 1127 aa6.94□□□□□ -1.3
NIPBL-207ENST00000513819 ELOA3CA0A087WX78 387 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-207ENST00000513819 ELOA3DA6NLF2 546 aaPredicted RBP6.93□□□□□ -1.3
NIPBL-207ENST00000513819 KRT76Q01546 638 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 FAAP100Q0VG06 881 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 MAP3K11Q16584 847 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 ELOA3BQ3SY89 546 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 PSAPL1Q6NUJ1 521 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 ERMP1Q7Z2K6 904 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 ELOA3Q8NG57 546 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 NOC4LQ9BVI4 516 aaKnown RBP6.93□□□□□ -1.3
NIPBL-207ENST00000513819 LACRTQ9GZZ8 138 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 CAPN10Q9HC96 672 aa6.93□□□□□ -1.3
NIPBL-207ENST00000513819 SRA1Q9HD15 236 aaKnown RBP6.93□□□□□ -1.3
NIPBL-207ENST00000513819 CELA3AP09093 270 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 ZNF157P51786 506 aaPredicted RBP6.92□□□□□ -1.3
NIPBL-207ENST00000513819 NFX1Q12986 1120 aaKnown RBP6.92□□□□□ -1.3
NIPBL-207ENST00000513819 ZNF654Q8IZM8 581 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 SLC16A10Q8TF71 515 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 NUDT8Q8WV74 236 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 BSNDQ8WZ55 320 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 ZFYVE1Q9HBF4 777 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 SEC31BQ9NQW1 1179 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 SH2B1Q9NRF2 756 aaPredicted RBP6.92□□□□□ -1.3
NIPBL-207ENST00000513819 KBTBD4Q9NVX7 518 aa6.92□□□□□ -1.3
NIPBL-207ENST00000513819 GPN3Q9UHW5 284 aaPredicted RBP6.92□□□□□ -1.3
NIPBL-207ENST00000513819 TTBK1Q5TCY1 1321 aaPredicted RBP6.92□□□□□ -1.3
NIPBL-207ENST00000513819 PTPRAP18433 802 aa6.91□□□□□ -1.3
NIPBL-207ENST00000513819 SRSF11Q05519 484 aaKnown RBP6.91□□□□□ -1.3
NIPBL-207ENST00000513819 GDF6Q6KF10 455 aaPredicted RBP6.91□□□□□ -1.3
NIPBL-207ENST00000513819 SLCO4C1Q6ZQN7 724 aa6.91□□□□□ -1.3
NIPBL-207ENST00000513819 C1orf229Q6ZS94 237 aaPredicted RBP6.91□□□□□ -1.3
NIPBL-207ENST00000513819 GOLGA6L1Q8N7Z2 621 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms