RNA–Protein interactions for RNA: ENST00000513725.1

SFXN1-210, Transcript of sideroflexin 1, humanhuman

TSL 2

Gene SFXN1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-210ENST00000513725 MAP3K11Q16584 847 aa15.85■□□□□ 0.13
SFXN1-210ENST00000513725 APOBEC3FQ8IUX4 373 aaKnown RBP15.85■□□□□ 0.13
SFXN1-210ENST00000513725 TDHQ8IZJ6 230 aa15.85■□□□□ 0.13
SFXN1-210ENST00000513725 TBC1D16Q8TBP0 767 aa15.85■□□□□ 0.13
SFXN1-210ENST00000513725 CLMNQ96JQ2 1002 aa15.85■□□□□ 0.13
SFXN1-210ENST00000513725 RRP7AQ9Y3A4 280 aaKnown RBP15.85■□□□□ 0.13
SFXN1-210ENST00000513725 PPP1R12BO60237 982 aaPredicted RBP15.84■□□□□ 0.13
SFXN1-210ENST00000513725 CCL5P13501 91 aa15.84■□□□□ 0.13
SFXN1-210ENST00000513725 TAF1CQ15572 869 aaPredicted RBP15.84■□□□□ 0.13
SFXN1-210ENST00000513725 OGFOD1Q8N543 542 aa15.84■□□□□ 0.13
SFXN1-210ENST00000513725 RNF208Q9H0X6 261 aa15.84■□□□□ 0.13
SFXN1-210ENST00000513725 FZD1Q9UP38 647 aa15.84■□□□□ 0.13
SFXN1-210ENST00000513725 WNT10BO00744 389 aa15.83■□□□□ 0.12
SFXN1-210ENST00000513725 MYL6BP14649 208 aa15.83■□□□□ 0.12
SFXN1-210ENST00000513725 GUCD1Q96NT3 240 aa15.83■□□□□ 0.12
SFXN1-210ENST00000513725 IRS2Q9Y4H2 1338 aa15.83■□□□□ 0.12
SFXN1-210ENST00000513725 EYSQ5T1H1 3165 aa15.83■□□□□ 0.12
SFXN1-210ENST00000513725 TNFRSF10AO00220 468 aa15.82■□□□□ 0.12
SFXN1-210ENST00000513725 WDHD1O75717 1129 aaPredicted RBP15.82■□□□□ 0.12
SFXN1-210ENST00000513725 U2AF1L4Q8WU68 220 aaKnown RBP15.82■□□□□ 0.12
SFXN1-210ENST00000513725 PANK3Q9H999 370 aa15.82■□□□□ 0.12
SFXN1-210ENST00000513725 TMEM265A0A087WTH1 108 aa15.81■□□□□ 0.12
SFXN1-210ENST00000513725 USP17L3A6NCW0 530 aa15.81■□□□□ 0.12
SFXN1-210ENST00000513725 USP17L4A6NCW7 530 aa15.81■□□□□ 0.12
SFXN1-210ENST00000513725 LACTBP83111 547 aaPredicted RBP15.81■□□□□ 0.12
SFXN1-210ENST00000513725 FAM109BQ6ICB4 259 aaPredicted RBP15.81■□□□□ 0.12
SFXN1-210ENST00000513725 USP17L1Q7RTZ2 530 aa15.81■□□□□ 0.12
SFXN1-210ENST00000513725 ARHGAP39Q9C0H5 1083 aa15.81■□□□□ 0.12
SFXN1-210ENST00000513725 PSME4Q14997 1843 aa15.8■□□□□ 0.12
SFXN1-210ENST00000513725 CAPN2P17655 700 aa15.8■□□□□ 0.12
SFXN1-210ENST00000513725 GRK4P32298 578 aa15.8■□□□□ 0.12
SFXN1-210ENST00000513725 GJA5P36382 358 aa15.8■□□□□ 0.12
SFXN1-210ENST00000513725 UBXN2AP68543 259 aa15.8■□□□□ 0.12
SFXN1-210ENST00000513725 CELF1Q92879 486 aaKnown RBP15.8■□□□□ 0.12
SFXN1-210ENST00000513725 COL1A1P02452 1464 aaPredicted RBP15.79■□□□□ 0.12
SFXN1-210ENST00000513725 RAET1EQ8TD07 263 aa15.79■□□□□ 0.12
SFXN1-210ENST00000513725 RTF1Q92541 710 aaKnown RBP15.79■□□□□ 0.12
SFXN1-210ENST00000513725 TRIM47Q96LD4 638 aa15.79■□□□□ 0.12
SFXN1-210ENST00000513725 BIN2Q9UBW5 565 aaPredicted RBP15.79■□□□□ 0.12
SFXN1-210ENST00000513725 TRMT112Q9UI30 125 aaKnown RBP15.79■□□□□ 0.12
SFXN1-210ENST00000513725 SH3TC1Q8TE82 1336 aa15.78■□□□□ 0.12
SFXN1-210ENST00000513725 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
SFXN1-210ENST00000513725 UFL1O94874 794 aa15.78■□□□□ 0.12
SFXN1-210ENST00000513725 SASH1O94885 1247 aa15.78■□□□□ 0.12
SFXN1-210ENST00000513725 SGPL1O95470 568 aa15.78■□□□□ 0.12
SFXN1-210ENST00000513725 MAFAQ8NHW3 353 aaPredicted RBP15.78■□□□□ 0.12
SFXN1-210ENST00000513725 RIPOR2Q9Y4F9 1068 aa15.78■□□□□ 0.12
SFXN1-210ENST00000513725 PRUNE2Q8WUY3 3088 aa15.78■□□□□ 0.12
SFXN1-210ENST00000513725 HOXD10P28358 340 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 IREB2P48200 963 aaKnown RBP15.77■□□□□ 0.12
SFXN1-210ENST00000513725 MMP14P50281 582 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 MAP3K12Q12852 859 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 PODNQ7Z5L7 613 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 ANKRD13AQ8IZ07 590 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 FAM161BQ96MY7 647 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 UBE2OQ9C0C9 1292 aaKnown RBP15.77■□□□□ 0.12
SFXN1-210ENST00000513725 DEFB129Q9H1M3 183 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 PODXL2Q9NZ53 605 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 ANKIB1Q9P2G1 1089 aa15.77■□□□□ 0.12
SFXN1-210ENST00000513725 ZMYND8Q9ULU4 1186 aaPredicted RBP15.77■□□□□ 0.12
SFXN1-210ENST00000513725 U2SURPO15042 1029 aaKnown RBP15.76■□□□□ 0.11
SFXN1-210ENST00000513725 TLR2O60603 784 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 ECM2O94769 699 aaPredicted RBP15.76■□□□□ 0.11
SFXN1-210ENST00000513725 MAGEA10P43363 369 aaPredicted RBP15.76■□□□□ 0.11
SFXN1-210ENST00000513725 SUPT20HL1Q3ZLR7 823 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 HSP90AB3PQ58FF7 597 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 NLRP10Q86W26 655 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 C7orf61Q8IZ16 206 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 MS4A4AQ96JQ5 239 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 SRRDQ9UH36 339 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 GGA1Q9UJY5 639 aa15.76■□□□□ 0.11
SFXN1-210ENST00000513725 ZSWIM8A7E2V4 1837 aa15.75■□□□□ 0.11
SFXN1-210ENST00000513725 CCL15-CCL14A0A0B4J2E2 113 aa15.75■□□□□ 0.11
SFXN1-210ENST00000513725 TFRCP02786 760 aaKnown RBP15.75■□□□□ 0.11
SFXN1-210ENST00000513725 CCL15Q16663 113 aa15.75■□□□□ 0.11
SFXN1-210ENST00000513725 MCM10Q7L590 875 aa15.75■□□□□ 0.11
SFXN1-210ENST00000513725 BRI3BPQ8WY22 251 aa15.75■□□□□ 0.11
SFXN1-210ENST00000513725 OPTNQ96CV9 577 aa15.75■□□□□ 0.11
SFXN1-210ENST00000513725 MYO3BQ8WXR4 1341 aa15.74■□□□□ 0.11
SFXN1-210ENST00000513725 GTF2A2P52657 109 aa15.74■□□□□ 0.11
SFXN1-210ENST00000513725 HELBQ8NG08 1087 aaPredicted RBP15.74■□□□□ 0.11
SFXN1-210ENST00000513725 PPP2R3BQ9Y5P8 575 aa15.74■□□□□ 0.11
SFXN1-210ENST00000513725 RPS8P62241 208 aaKnown RBP15.73■□□□□ 0.11
SFXN1-210ENST00000513725 SF3B3Q15393 1217 aaKnown RBP15.73■□□□□ 0.11
SFXN1-210ENST00000513725 TAF7Q15545 349 aaPredicted RBP15.73■□□□□ 0.11
SFXN1-210ENST00000513725 TJAP1Q5JTD0 557 aa15.73■□□□□ 0.11
SFXN1-210ENST00000513725 ZNF697Q5TEC3 545 aa15.73■□□□□ 0.11
SFXN1-210ENST00000513725 NECAB2Q7Z6G3 386 aa15.73■□□□□ 0.11
SFXN1-210ENST00000513725 FAM43AQ8N2R8 423 aa15.73■□□□□ 0.11
SFXN1-210ENST00000513725 SNX27Q96L92 541 aa15.73■□□□□ 0.11
SFXN1-210ENST00000513725 KNSTRNQ9Y448 316 aa15.73■□□□□ 0.11
SFXN1-210ENST00000513725 SSC5DA1L4H1 1573 aa15.73■□□□□ 0.11
SFXN1-210ENST00000513725 SYNGAP1Q96PV0 1343 aa15.72■□□□□ 0.11
SFXN1-210ENST00000513725 PSMC4P43686 418 aa15.72■□□□□ 0.11
SFXN1-210ENST00000513725 PAWRQ96IZ0 340 aaKnown RBP15.72■□□□□ 0.11
SFXN1-210ENST00000513725 UNC93B1Q9H1C4 597 aa15.72■□□□□ 0.11
SFXN1-210ENST00000513725 ELP3Q9H9T3 547 aa15.72■□□□□ 0.11
SFXN1-210ENST00000513725 ALPK3Q96L96 1907 aa15.72■□□□□ 0.11
SFXN1-210ENST00000513725 FAM205AQ6ZU69 1335 aa15.71■□□□□ 0.11
SFXN1-210ENST00000513725 MYPNQ86TC9 1320 aa15.71■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms