RNA–Protein interactions for RNA: ENST00000513666.5

CAST-239, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 1,539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-239ENST00000513666 ISCA1Q9BUE6 129 aa11.78□□□□□ -0.52
CAST-239ENST00000513666 R3HDMLQ9H3Y0 253 aa11.78□□□□□ -0.52
CAST-239ENST00000513666 FXR1P51114 621 aaKnown RBP eCLIP11.77□□□□□ -0.52
CAST-239ENST00000513666 TTLL12Q14166 644 aaPredicted RBP11.77□□□□□ -0.52
CAST-239ENST00000513666 PRAMEF18Q5VWM3 479 aa11.77□□□□□ -0.52
CAST-239ENST00000513666 INTS3Q68E01 1043 aaKnown RBP11.77□□□□□ -0.52
CAST-239ENST00000513666 LHX8Q68G74 356 aa11.77□□□□□ -0.52
CAST-239ENST00000513666 PLBD2Q8NHP8 589 aa11.77□□□□□ -0.52
CAST-239ENST00000513666 MS4A3Q96HJ5 214 aa11.77□□□□□ -0.52
CAST-239ENST00000513666 GGA1Q9UJY5 639 aa11.77□□□□□ -0.52
CAST-239ENST00000513666 SCAF8Q9UPN6 1271 aaKnown RBP11.77□□□□□ -0.52
CAST-239ENST00000513666 MAPK8IP3Q9UPT6 1336 aa11.77□□□□□ -0.53
CAST-239ENST00000513666 POTEFA5A3E0 1075 aa11.76□□□□□ -0.53
CAST-239ENST00000513666 MKRN3Q13064 507 aaKnown RBP11.76□□□□□ -0.53
CAST-239ENST00000513666 KIF12Q96FN5 646 aa11.76□□□□□ -0.53
CAST-239ENST00000513666 ANKIB1Q9P2G1 1089 aa11.76□□□□□ -0.53
CAST-239ENST00000513666 HTTP42858 3142 aa11.76□□□□□ -0.53
CAST-239ENST00000513666 IRS4O14654 1257 aaPredicted RBP11.76□□□□□ -0.53
CAST-239ENST00000513666 ALDH1A1P00352 501 aa11.76□□□□□ -0.53
CAST-239ENST00000513666 NF2P35240 595 aa11.76□□□□□ -0.53
CAST-239ENST00000513666 ANKRD13DQ6ZTN6 518 aa11.76□□□□□ -0.53
CAST-239ENST00000513666 CCER1Q8TC90 406 aaPredicted RBP11.76□□□□□ -0.53
CAST-239ENST00000513666 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
CAST-239ENST00000513666 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
CAST-239ENST00000513666 MKI67P46013 3256 aaKnown RBP11.75□□□□□ -0.53
CAST-239ENST00000513666 USP17L3A6NCW0 530 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 USP17L4A6NCW7 530 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 ATP5J2-PTCD1G3V325 749 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 NBPF9Q3BBW0 867 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 RTL5Q5HYW3 569 aaPredicted RBP11.75□□□□□ -0.53
CAST-239ENST00000513666 OTOP1Q7RTM1 612 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 USP17L1Q7RTZ2 530 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 SEC31BQ9NQW1 1179 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 CHPF2Q9P2E5 772 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 TRIM17Q9Y577 477 aa11.75□□□□□ -0.53
CAST-239ENST00000513666 PTPN12Q05209 780 aaKnown RBP11.74□□□□□ -0.53
CAST-239ENST00000513666 TRIM28Q13263 835 aaKnown RBP11.74□□□□□ -0.53
CAST-239ENST00000513666 SPRYD7Q5W111 196 aa11.74□□□□□ -0.53
CAST-239ENST00000513666 PODNQ7Z5L7 613 aa11.74□□□□□ -0.53
CAST-239ENST00000513666 ZNF646O15015 1829 aaPredicted RBP11.73□□□□□ -0.53
CAST-239ENST00000513666 WNT10BO00744 389 aa11.73□□□□□ -0.53
CAST-239ENST00000513666 RIPK4P57078 832 aa11.73□□□□□ -0.53
CAST-239ENST00000513666 LDLRAD1Q5T700 205 aa11.73□□□□□ -0.53
CAST-239ENST00000513666 ARMC9Q7Z3E5 817 aa11.73□□□□□ -0.53
CAST-239ENST00000513666 XDHP47989 1333 aa11.73□□□□□ -0.53
CAST-239ENST00000513666 LAMB1P07942 1786 aa11.72□□□□□ -0.53
CAST-239ENST00000513666 MANSC4A6NHS7 340 aaPredicted RBP11.72□□□□□ -0.53
CAST-239ENST00000513666 INHBEP58166 350 aa11.72□□□□□ -0.53
CAST-239ENST00000513666 KRT24Q2M2I5 525 aa11.72□□□□□ -0.53
CAST-239ENST00000513666 IFNL1Q8IU54 200 aa11.72□□□□□ -0.53
CAST-239ENST00000513666 HSP90B1P14625 803 aaKnown RBP11.71□□□□□ -0.53
CAST-239ENST00000513666 ATP2B4P23634 1241 aa11.71□□□□□ -0.53
CAST-239ENST00000513666 LMOD3Q0VAK6 560 aa11.71□□□□□ -0.53
CAST-239ENST00000513666 HDGFL1Q5TGJ6 251 aa11.71□□□□□ -0.53
CAST-239ENST00000513666 ASTLQ6HA08 431 aaPredicted RBP11.71□□□□□ -0.53
CAST-239ENST00000513666 OGFOD1Q8N543 542 aa11.71□□□□□ -0.53
CAST-239ENST00000513666 ZBTB38Q8NAP3 1195 aaPredicted RBP11.71□□□□□ -0.53
CAST-239ENST00000513666 ARMC5Q96C12 935 aa11.71□□□□□ -0.53
CAST-239ENST00000513666 PTPN22Q9Y2R2 807 aa11.71□□□□□ -0.53
CAST-239ENST00000513666 MYO3BQ8WXR4 1341 aa11.71□□□□□ -0.54
CAST-239ENST00000513666 EN2P19622 333 aaPredicted RBP11.7□□□□□ -0.54
CAST-239ENST00000513666 MMP14P50281 582 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 PRKG1Q13976 671 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 CCDC152Q4G0S7 254 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 DACT2Q5SW24 774 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 ERO1AQ96HE7 468 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 DBF4Q9UBU7 674 aaPredicted RBP11.7□□□□□ -0.54
CAST-239ENST00000513666 ANGEL1Q9UNK9 670 aaKnown RBP11.7□□□□□ -0.54
CAST-239ENST00000513666 COLQQ9Y215 455 aaPredicted RBP11.7□□□□□ -0.54
CAST-239ENST00000513666 MED23Q9ULK4 1368 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 CHL1O00533 1208 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 HOXB7P09629 217 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 ZBTB48P10074 688 aaPredicted RBP11.7□□□□□ -0.54
CAST-239ENST00000513666 APOBEC3FQ8IUX4 373 aaKnown RBP11.7□□□□□ -0.54
CAST-239ENST00000513666 MXD3Q9BW11 206 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 HYPKQ9NX55 129 aa11.7□□□□□ -0.54
CAST-239ENST00000513666 COL1A1P02452 1464 aaPredicted RBP11.69□□□□□ -0.54
CAST-239ENST00000513666 IGF2BP3O00425 579 aaKnown RBP eCLIP11.69□□□□□ -0.54
CAST-239ENST00000513666 PDE8AO60658 829 aa11.69□□□□□ -0.54
CAST-239ENST00000513666 SASH1O94885 1247 aa11.69□□□□□ -0.54
CAST-239ENST00000513666 TMPOP42166 694 aaKnown RBP11.69□□□□□ -0.54
CAST-239ENST00000513666 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
CAST-239ENST00000513666 STRIP1Q5VSL9 837 aa11.69□□□□□ -0.54
CAST-239ENST00000513666 ANKRD18AQ8IVF6 992 aa11.69□□□□□ -0.54
CAST-239ENST00000513666 CD99L2Q8TCZ2 262 aa11.69□□□□□ -0.54
CAST-239ENST00000513666 SLC10A4Q96EP9 437 aa11.69□□□□□ -0.54
CAST-239ENST00000513666 TRIOBPQ9H2D6 2365 aa11.69□□□□□ -0.54
CAST-239ENST00000513666 CEP290O15078 2479 aa11.68□□□□□ -0.54
CAST-239ENST00000513666 PCCAP05165 728 aaPredicted RBP11.68□□□□□ -0.54
CAST-239ENST00000513666 MAP3K11Q16584 847 aa11.68□□□□□ -0.54
CAST-239ENST00000513666 ZBED3Q96IU2 234 aaPredicted RBP11.68□□□□□ -0.54
CAST-239ENST00000513666 WNK4Q96J92 1243 aa11.68□□□□□ -0.54
CAST-239ENST00000513666 EFCC1Q9HA90 598 aa11.68□□□□□ -0.54
CAST-239ENST00000513666 CENPFP49454 3210 aa11.68□□□□□ -0.54
CAST-239ENST00000513666 WTIPA6NIX2 430 aaPredicted RBP11.67□□□□□ -0.54
CAST-239ENST00000513666 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
CAST-239ENST00000513666 CCDC85AQ96PX6 553 aaPredicted RBP11.67□□□□□ -0.54
CAST-239ENST00000513666 TMEM106CQ9BVX2 250 aa11.67□□□□□ -0.54
CAST-239ENST00000513666 FZD1Q9UP38 647 aa11.67□□□□□ -0.54
CAST-239ENST00000513666 UNCXA6NJT0 531 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms