RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 NF2P35240 595 aa18.08■□□□□ 0.48
SPCS3-204ENST00000513139 MMP14P50281 582 aa18.08■□□□□ 0.48
SPCS3-204ENST00000513139 CACNB1Q02641 598 aaPredicted RBP18.08■□□□□ 0.48
SPCS3-204ENST00000513139 ATP2B4P23634 1241 aa18.07■□□□□ 0.48
SPCS3-204ENST00000513139 TTLL12Q14166 644 aaPredicted RBP18.07■□□□□ 0.48
SPCS3-204ENST00000513139 POLA2Q14181 598 aa18.07■□□□□ 0.48
SPCS3-204ENST00000513139 NBPF9Q3BBW0 867 aa18.07■□□□□ 0.48
SPCS3-204ENST00000513139 SPEF2Q9C093 1822 aa18.07■□□□□ 0.48
SPCS3-204ENST00000513139 PDE8AO60658 829 aa18.06■□□□□ 0.48
SPCS3-204ENST00000513139 OGFOD1Q8N543 542 aa18.06■□□□□ 0.48
SPCS3-204ENST00000513139 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
SPCS3-204ENST00000513139 MYO3BQ8WXR4 1341 aa18.05■□□□□ 0.48
SPCS3-204ENST00000513139 ALDH1A1P00352 501 aa18.05■□□□□ 0.48
SPCS3-204ENST00000513139 PCCAP05165 728 aaPredicted RBP18.05■□□□□ 0.48
SPCS3-204ENST00000513139 PRAMEF18Q5VWM3 479 aa18.05■□□□□ 0.48
SPCS3-204ENST00000513139 RIC3Q7Z5B4 369 aa18.05■□□□□ 0.48
SPCS3-204ENST00000513139 ANKRD18AQ8IVF6 992 aa18.05■□□□□ 0.48
SPCS3-204ENST00000513139 LAS1LQ9Y4W2 734 aaKnown RBP18.05■□□□□ 0.48
SPCS3-204ENST00000513139 MED23Q9ULK4 1368 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 WNT10BO00744 389 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 GOLGA2Q08379 1002 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 NEUROD2Q15784 382 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 DUSP27Q5VZP5 1158 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
SPCS3-204ENST00000513139 ARMC9Q7Z3E5 817 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 SCAF8Q9UPN6 1271 aaKnown RBP18.04■□□□□ 0.48
SPCS3-204ENST00000513139 TRIM35Q9UPQ4 493 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 ECM29Q5VYK3 1845 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 BRCA2P51587 3418 aa18.04■□□□□ 0.48
SPCS3-204ENST00000513139 INHBEP58166 350 aa18.03■□□□□ 0.48
SPCS3-204ENST00000513139 PTPN12Q05209 780 aaKnown RBP18.03■□□□□ 0.48
SPCS3-204ENST00000513139 DACT2Q5SW24 774 aa18.03■□□□□ 0.48
SPCS3-204ENST00000513139 LDLRAD1Q5T700 205 aa18.03■□□□□ 0.48
SPCS3-204ENST00000513139 STRIP1Q5VSL9 837 aa18.03■□□□□ 0.48
SPCS3-204ENST00000513139 HABP4Q5JVS0 413 aaKnown RBP18.02■□□□□ 0.48
SPCS3-204ENST00000513139 SPRYD7Q5W111 196 aa18.02■□□□□ 0.48
SPCS3-204ENST00000513139 APOBEC3FQ8IUX4 373 aaKnown RBP18.02■□□□□ 0.48
SPCS3-204ENST00000513139 CDC5LQ99459 802 aaKnown RBP18.02■□□□□ 0.48
SPCS3-204ENST00000513139 R3HDMLQ9H3Y0 253 aa18.02■□□□□ 0.48
SPCS3-204ENST00000513139 MKRN3Q13064 507 aaKnown RBP18.01■□□□□ 0.47
SPCS3-204ENST00000513139 MYD88Q99836 296 aa18.01■□□□□ 0.47
SPCS3-204ENST00000513139 CWC25Q9NXE8 425 aaPredicted RBP18.01■□□□□ 0.47
SPCS3-204ENST00000513139 RALBP1Q15311 655 aa18■□□□□ 0.47
SPCS3-204ENST00000513139 RUNDC1Q96C34 613 aa18■□□□□ 0.47
SPCS3-204ENST00000513139 COA1Q9GZY4 146 aa18■□□□□ 0.47
SPCS3-204ENST00000513139 BSDC1Q9NW68 430 aaPredicted RBP18■□□□□ 0.47
SPCS3-204ENST00000513139 COL1A1P02452 1464 aaPredicted RBP18■□□□□ 0.47
SPCS3-204ENST00000513139 MANSC4A6NHS7 340 aaPredicted RBP17.99■□□□□ 0.47
SPCS3-204ENST00000513139 CCDC85AQ96PX6 553 aaPredicted RBP17.99■□□□□ 0.47
SPCS3-204ENST00000513139 PHAXQ9H814 394 aaKnown RBP17.99■□□□□ 0.47
SPCS3-204ENST00000513139 MINPP1Q9UNW1 487 aa17.99■□□□□ 0.47
SPCS3-204ENST00000513139 CEP290O15078 2479 aa17.98■□□□□ 0.47
SPCS3-204ENST00000513139 WTIPA6NIX2 430 aaPredicted RBP17.98■□□□□ 0.47
SPCS3-204ENST00000513139 CCT4P50991 539 aaKnown RBP17.98■□□□□ 0.47
SPCS3-204ENST00000513139 CTSWP56202 376 aa17.98■□□□□ 0.47
SPCS3-204ENST00000513139 OTOP1Q7RTM1 612 aa17.98■□□□□ 0.47
SPCS3-204ENST00000513139 IFNL1Q8IU54 200 aa17.98■□□□□ 0.47
SPCS3-204ENST00000513139 CCDC146Q8IYE0 955 aa17.98■□□□□ 0.47
SPCS3-204ENST00000513139 ZBED3Q96IU2 234 aaPredicted RBP17.98■□□□□ 0.47
SPCS3-204ENST00000513139 METTL22Q9BUU2 404 aaPredicted RBP17.98■□□□□ 0.47
SPCS3-204ENST00000513139 MXD3Q9BW11 206 aa17.98■□□□□ 0.47
SPCS3-204ENST00000513139 TRIM17Q9Y577 477 aa17.98■□□□□ 0.47
SPCS3-204ENST00000513139 UNCXA6NJT0 531 aa17.97■□□□□ 0.47
SPCS3-204ENST00000513139 ZBTB48P10074 688 aaPredicted RBP17.97■□□□□ 0.47
SPCS3-204ENST00000513139 MAP3K11Q16584 847 aa17.97■□□□□ 0.47
SPCS3-204ENST00000513139 MBIPQ9NS73 344 aa17.97■□□□□ 0.47
SPCS3-204ENST00000513139 ANGEL1Q9UNK9 670 aaKnown RBP17.97■□□□□ 0.47
SPCS3-204ENST00000513139 POTEFA5A3E0 1075 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 ABCB7O75027 752 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 SASH1O94885 1247 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 DDX58O95786 925 aaKnown RBP17.96■□□□□ 0.47
SPCS3-204ENST00000513139 TTLL5Q6EMB2 1281 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 TTLL11Q8NHH1 800 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 SLC10A4Q96EP9 437 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 CHMP4AQ9BY43 222 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 LEMD3Q9Y2U8 911 aa17.96■□□□□ 0.47
SPCS3-204ENST00000513139 ZNF853P0CG23 659 aa17.95■□□□□ 0.46
SPCS3-204ENST00000513139 PRKG1Q13976 671 aa17.95■□□□□ 0.46
SPCS3-204ENST00000513139 JARID2Q92833 1246 aaPredicted RBP17.95■□□□□ 0.46
SPCS3-204ENST00000513139 FBXW7Q969H0 707 aa17.95■□□□□ 0.46
SPCS3-204ENST00000513139 ERO1AQ96HE7 468 aa17.95■□□□□ 0.46
SPCS3-204ENST00000513139 DEFB129Q9H1M3 183 aa17.94■□□□□ 0.46
SPCS3-204ENST00000513139 PTPN22Q9Y2R2 807 aa17.94■□□□□ 0.46
SPCS3-204ENST00000513139 PPP2R3BQ9Y5P8 575 aa17.94■□□□□ 0.46
SPCS3-204ENST00000513139 PPP1R12BO60237 982 aaPredicted RBP17.93■□□□□ 0.46
SPCS3-204ENST00000513139 TXNRD3Q86VQ6 643 aa17.93■□□□□ 0.46
SPCS3-204ENST00000513139 KIAA0825Q8IV33 1275 aa17.93■□□□□ 0.46
SPCS3-204ENST00000513139 MTMR14Q8NCE2 650 aa17.93■□□□□ 0.46
SPCS3-204ENST00000513139 ARMC5Q96C12 935 aa17.93■□□□□ 0.46
SPCS3-204ENST00000513139 WNK4Q96J92 1243 aa17.93■□□□□ 0.46
SPCS3-204ENST00000513139 GREM2Q9H772 168 aa17.93■□□□□ 0.46
SPCS3-204ENST00000513139 IGF2BP3O00425 579 aaKnown RBP eCLIP17.92■□□□□ 0.46
SPCS3-204ENST00000513139 OTUD7BQ6GQQ9 843 aa17.92■□□□□ 0.46
SPCS3-204ENST00000513139 IFT57Q9NWB7 429 aa17.92■□□□□ 0.46
SPCS3-204ENST00000513139 FXR1P51114 621 aaKnown RBP eCLIP17.91■□□□□ 0.46
SPCS3-204ENST00000513139 GNAI1P63096 354 aa17.91■□□□□ 0.46
SPCS3-204ENST00000513139 WDR43Q15061 677 aaKnown RBP eCLIP17.91■□□□□ 0.46
SPCS3-204ENST00000513139 DLGAP5Q15398 846 aa17.91■□□□□ 0.46
SPCS3-204ENST00000513139 ANKRD2Q9GZV1 360 aa17.91■□□□□ 0.46
SPCS3-204ENST00000513139 MAP3K2Q9Y2U5 619 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms