RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 SALL4Q9UJQ4 1053 aa4.8□□□□□ -1.64
PDGFC-208ENST00000512711 POLIQ9UNA4 740 aa4.8□□□□□ -1.64
PDGFC-208ENST00000512711 F8W735 103 aaPredicted RBP4.79□□□□□ -1.64
PDGFC-208ENST00000512711 WISP1O95388 367 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 H2AFB1P0C5Y9 115 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 H2AFB2P0C5Z0 115 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 EPHA1P21709 976 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 HGSNATQ68CP4 663 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 KRTAP19-1Q8IUB9 90 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 DZIP1LQ8IYY4 767 aaKnown RBP4.79□□□□□ -1.64
PDGFC-208ENST00000512711 TMEM130Q8N3G9 435 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 SPACA7Q96KW9 195 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 CARD10Q9BWT7 1032 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 RBSNQ9H1K0 784 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 AKTIPQ9H8T0 292 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 CCDC87Q9NVE4 849 aa4.79□□□□□ -1.64
PDGFC-208ENST00000512711 SUPT5HO00267 1087 aaKnown RBP4.78□□□□□ -1.64
PDGFC-208ENST00000512711 FZD6O60353 706 aa4.78□□□□□ -1.64
PDGFC-208ENST00000512711 NPR3P17342 541 aa4.78□□□□□ -1.64
PDGFC-208ENST00000512711 CES1P23141 567 aa4.78□□□□□ -1.64
PDGFC-208ENST00000512711 MZF1P28698 734 aaPredicted RBP4.78□□□□□ -1.64
PDGFC-208ENST00000512711 CDC27P30260 824 aa4.78□□□□□ -1.64
PDGFC-208ENST00000512711 LRP8Q14114 963 aa4.78□□□□□ -1.64
PDGFC-208ENST00000512711 ECM1Q16610 540 aa4.78□□□□□ -1.64
PDGFC-208ENST00000512711 KLHDC7BQ96G42 594 aa4.78□□□□□ -1.64
PDGFC-208ENST00000512711 UBL7Q96S82 380 aaPredicted RBP4.78□□□□□ -1.64
PDGFC-208ENST00000512711 FSCN2O14926 492 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 EREGO14944 169 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 ADAM11O75078 769 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 SMNDC1O75940 238 aaKnown RBP eCLIP4.77□□□□□ -1.65
PDGFC-208ENST00000512711 ABL1P00519 1130 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 FKBP4Q02790 459 aaKnown RBP eCLIP4.77□□□□□ -1.65
PDGFC-208ENST00000512711 ZNF211Q13398 564 aaPredicted RBP4.77□□□□□ -1.65
PDGFC-208ENST00000512711 AAMPQ13685 434 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 ARID3AQ99856 593 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 ADAM19Q9H013 955 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 MRPL18Q9H0U6 180 aaKnown RBP4.77□□□□□ -1.65
PDGFC-208ENST00000512711 DZANK1Q9NVP4 752 aa4.77□□□□□ -1.65
PDGFC-208ENST00000512711 FOXD3Q9UJU5 478 aaPredicted RBP4.77□□□□□ -1.65
PDGFC-208ENST00000512711 BTBD11A6QL63 1104 aa4.76□□□□□ -1.65
PDGFC-208ENST00000512711 TNFRSF21O75509 655 aa4.76□□□□□ -1.65
PDGFC-208ENST00000512711 CD68P34810 354 aaPredicted RBP4.76□□□□□ -1.65
PDGFC-208ENST00000512711 KIAA1211Q6ZU35 1233 aa4.76□□□□□ -1.65
PDGFC-208ENST00000512711 SERPINB4P48594 390 aa4.75□□□□□ -1.65
PDGFC-208ENST00000512711 PRR23CQ6ZRP0 262 aa4.75□□□□□ -1.65
PDGFC-208ENST00000512711 FOXD4L4Q8WXT5 416 aaPredicted RBP4.75□□□□□ -1.65
PDGFC-208ENST00000512711 NXPE3Q969Y0 559 aa4.75□□□□□ -1.65
PDGFC-208ENST00000512711 OSMRQ99650 979 aa4.75□□□□□ -1.65
PDGFC-208ENST00000512711 MUC3BQ9H195 1237 aa4.75□□□□□ -1.65
PDGFC-208ENST00000512711 GOLGA2P5Q9HBQ8 144 aa4.75□□□□□ -1.65
PDGFC-208ENST00000512711 LATS2Q9NRM7 1088 aa4.75□□□□□ -1.65
PDGFC-208ENST00000512711 PDE2AO00408 941 aaPredicted RBP4.74□□□□□ -1.65
PDGFC-208ENST00000512711 FAM13AO94988 1023 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 RPLP1P05386 114 aaKnown RBP4.74□□□□□ -1.65
PDGFC-208ENST00000512711 POLR3DP05423 398 aaPredicted RBP4.74□□□□□ -1.65
PDGFC-208ENST00000512711 GLB1P16278 677 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 PCSK2P16519 638 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 PTPRAP18433 802 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 PEAR1Q5VY43 1037 aaPredicted RBP4.74□□□□□ -1.65
PDGFC-208ENST00000512711 ALKBH2Q6NS38 261 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.74□□□□□ -1.65
PDGFC-208ENST00000512711 MAP4K3Q8IVH8 894 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 CACTIN-AS1Q8N1I8 211 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 ARMC10Q8N2F6 343 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 UBASH3BQ8TF42 649 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 ZKSCAN3Q9BRR0 538 aa4.74□□□□□ -1.65
PDGFC-208ENST00000512711 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 METTL12A8MUP2 240 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 SOX1O00570 391 aaPredicted RBP4.73□□□□□ -1.65
PDGFC-208ENST00000512711 DUOXA2Q1HG44 320 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 Q6ZS46 218 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 ACAD11Q709F0 780 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 VN1R5Q7Z5H4 357 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 TTC16Q8NEE8 873 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 SLC7A3Q8WY07 619 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 SRA1Q9HD15 236 aaKnown RBP4.73□□□□□ -1.65
PDGFC-208ENST00000512711 SEC31BQ9NQW1 1179 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 SOX13Q9UN79 622 aa4.73□□□□□ -1.65
PDGFC-208ENST00000512711 ICMTO60725 284 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 PHACTR2O75167 634 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 DLGAP3O95886 979 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 NLRP12P59046 1061 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 SF3B2Q13435 895 aaKnown RBP4.72□□□□□ -1.65
PDGFC-208ENST00000512711 USPL1Q5W0Q7 1092 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 GJD3Q8N144 294 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 TMEM102Q8N9M5 508 aaPredicted RBP4.72□□□□□ -1.65
PDGFC-208ENST00000512711 KLHL23Q8NBE8 558 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 PMEPA1Q969W9 287 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 ZFYVE28Q9HCC9 887 aa4.72□□□□□ -1.65
PDGFC-208ENST00000512711 H3BRJ5 948 aa4.71□□□□□ -1.66
PDGFC-208ENST00000512711 MED26O95402 600 aa4.71□□□□□ -1.66
PDGFC-208ENST00000512711 ARHGAP4P98171 946 aa4.71□□□□□ -1.66
PDGFC-208ENST00000512711 HMX2A2RU54 273 aa4.7□□□□□ -1.66
PDGFC-208ENST00000512711 FSTP19883 344 aa4.7□□□□□ -1.66
PDGFC-208ENST00000512711 USP5P45974 858 aa4.7□□□□□ -1.66
PDGFC-208ENST00000512711 PIP4K2BP78356 416 aa4.7□□□□□ -1.66
PDGFC-208ENST00000512711 SPRED3Q2MJR0 410 aa4.7□□□□□ -1.66
PDGFC-208ENST00000512711 FAM117BQ6P1L5 589 aa4.7□□□□□ -1.66
PDGFC-208ENST00000512711 ASAP3Q8TDY4 903 aa4.7□□□□□ -1.66
PDGFC-208ENST00000512711 BSNDQ8WZ55 320 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms