RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 CCT4P50991 539 aaKnown RBP16.08■□□□□ 0.16
VEGFA-216ENST00000512683 MLLT1Q03111 559 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-216ENST00000512683 JARID2Q92833 1246 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-216ENST00000512683 CCDC85AQ96PX6 553 aaPredicted RBP16.08■□□□□ 0.16
VEGFA-216ENST00000512683 MYH16Q9H6N6 1097 aa16.08■□□□□ 0.16
VEGFA-216ENST00000512683 TRPM7Q96QT4 1865 aa16.08■□□□□ 0.16
VEGFA-216ENST00000512683 DLK2Q6UY11 383 aa16.07■□□□□ 0.16
VEGFA-216ENST00000512683 CSRNP1Q96S65 589 aa16.07■□□□□ 0.16
VEGFA-216ENST00000512683 ZIC5Q96T25 663 aa16.07■□□□□ 0.16
VEGFA-216ENST00000512683 GREM2Q9H772 168 aa16.07■□□□□ 0.16
VEGFA-216ENST00000512683 RNF186Q9NXI6 227 aa16.07■□□□□ 0.16
VEGFA-216ENST00000512683 ANP32CO43423 234 aa16.06■□□□□ 0.16
VEGFA-216ENST00000512683 DGKZQ13574 1117 aa16.06■□□□□ 0.16
VEGFA-216ENST00000512683 GCKRQ14397 625 aa16.06■□□□□ 0.16
VEGFA-216ENST00000512683 DACT2Q5SW24 774 aa16.06■□□□□ 0.16
VEGFA-216ENST00000512683 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
VEGFA-216ENST00000512683 LINS1Q8NG48 757 aa16.06■□□□□ 0.16
VEGFA-216ENST00000512683 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
VEGFA-216ENST00000512683 NF2P35240 595 aa16.05■□□□□ 0.16
VEGFA-216ENST00000512683 FLIIQ13045 1269 aa16.05■□□□□ 0.16
VEGFA-216ENST00000512683 CWF19L2Q2TBE0 894 aaKnown RBP16.05■□□□□ 0.16
VEGFA-216ENST00000512683 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
VEGFA-216ENST00000512683 MPHOSPH8Q99549 860 aa16.05■□□□□ 0.16
VEGFA-216ENST00000512683 ZNF804BA4D1E1 1349 aa16.04■□□□□ 0.16
VEGFA-216ENST00000512683 TRPA1O75762 1119 aa16.04■□□□□ 0.16
VEGFA-216ENST00000512683 FAM161AQ3B820 660 aa16.04■□□□□ 0.16
VEGFA-216ENST00000512683 TTLL5Q6EMB2 1281 aa16.04■□□□□ 0.16
VEGFA-216ENST00000512683 UBE3BQ7Z3V4 1068 aa16.04■□□□□ 0.16
VEGFA-216ENST00000512683 DNAAF4Q8WXU2 420 aa16.04■□□□□ 0.16
VEGFA-216ENST00000512683 HDAC9Q9UKV0 1011 aa16.04■□□□□ 0.16
VEGFA-216ENST00000512683 ASTN2O75129 1339 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-216ENST00000512683 ITGA6P23229 1130 aa16.03■□□□□ 0.16
VEGFA-216ENST00000512683 PKN2Q16513 984 aaKnown RBP16.03■□□□□ 0.16
VEGFA-216ENST00000512683 NOM1Q5C9Z4 860 aaKnown RBP16.03■□□□□ 0.16
VEGFA-216ENST00000512683 C15orf52Q6ZUT6 534 aaKnown RBP16.03■□□□□ 0.16
VEGFA-216ENST00000512683 RASAL3Q86YV0 1011 aa16.03■□□□□ 0.16
VEGFA-216ENST00000512683 CACNA1FO60840 1977 aa16.03■□□□□ 0.16
VEGFA-216ENST00000512683 WNT10BO00744 389 aa16.02■□□□□ 0.16
VEGFA-216ENST00000512683 VAMP4O75379 141 aa16.02■□□□□ 0.16
VEGFA-216ENST00000512683 TM4SF4P48230 202 aa16.02■□□□□ 0.16
VEGFA-216ENST00000512683 CASP7P55210 303 aa16.02■□□□□ 0.16
VEGFA-216ENST00000512683 FKBP5Q13451 457 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-216ENST00000512683 G2E3Q7L622 706 aa16.02■□□□□ 0.16
VEGFA-216ENST00000512683 ANKRD18BA2A2Z9 1011 aa16.01■□□□□ 0.15
VEGFA-216ENST00000512683 UNCXA6NJT0 531 aa16.01■□□□□ 0.15
VEGFA-216ENST00000512683 NBPF9Q3BBW0 867 aa16.01■□□□□ 0.15
VEGFA-216ENST00000512683 ARMC9Q7Z3E5 817 aa16.01■□□□□ 0.15
VEGFA-216ENST00000512683 APOBEC3FQ8IUX4 373 aaKnown RBP16.01■□□□□ 0.15
VEGFA-216ENST00000512683 COL4A1P02462 1669 aa16.01■□□□□ 0.15
VEGFA-216ENST00000512683 KCNJ4P48050 445 aa16■□□□□ 0.15
VEGFA-216ENST00000512683 FKBP1AP62942 108 aaKnown RBP16■□□□□ 0.15
VEGFA-216ENST00000512683 CTU1Q7Z7A3 348 aaKnown RBP16■□□□□ 0.15
VEGFA-216ENST00000512683 MTMR14Q8NCE2 650 aa16■□□□□ 0.15
VEGFA-216ENST00000512683 WTIPA6NIX2 430 aaPredicted RBP15.99■□□□□ 0.15
VEGFA-216ENST00000512683 UBE2Q2LH0YL09 131 aa15.99■□□□□ 0.15
VEGFA-216ENST00000512683 INHBEP58166 350 aa15.99■□□□□ 0.15
VEGFA-216ENST00000512683 CHRNDQ07001 517 aa15.99■□□□□ 0.15
VEGFA-216ENST00000512683 IFIT5Q13325 482 aaKnown RBP15.99■□□□□ 0.15
VEGFA-216ENST00000512683 TXNRD3Q86VQ6 643 aa15.99■□□□□ 0.15
VEGFA-216ENST00000512683 ZBED3Q96IU2 234 aaPredicted RBP15.99■□□□□ 0.15
VEGFA-216ENST00000512683 CFHR5Q9BXR6 569 aa15.99■□□□□ 0.15
VEGFA-216ENST00000512683 CD209Q9NNX6 404 aa15.99■□□□□ 0.15
VEGFA-216ENST00000512683 SREBF2Q12772 1141 aa15.98■□□□□ 0.15
VEGFA-216ENST00000512683 PPP2R3BQ9Y5P8 575 aa15.98■□□□□ 0.15
VEGFA-216ENST00000512683 FANCIQ9NVI1 1328 aa15.97■□□□□ 0.15
VEGFA-216ENST00000512683 ALDH1A1P00352 501 aa15.97■□□□□ 0.15
VEGFA-216ENST00000512683 GTF2IP78347 998 aa15.97■□□□□ 0.15
VEGFA-216ENST00000512683 TTLL12Q14166 644 aaPredicted RBP15.97■□□□□ 0.15
VEGFA-216ENST00000512683 LDLRAD1Q5T700 205 aa15.97■□□□□ 0.15
VEGFA-216ENST00000512683 FBXW7Q969H0 707 aa15.97■□□□□ 0.15
VEGFA-216ENST00000512683 MYH3P11055 1940 aa15.97■□□□□ 0.15
VEGFA-216ENST00000512683 IL1R1P14778 569 aa15.96■□□□□ 0.15
VEGFA-216ENST00000512683 DLGAP5Q15398 846 aa15.96■□□□□ 0.15
VEGFA-216ENST00000512683 MAP3K11Q16584 847 aa15.96■□□□□ 0.15
VEGFA-216ENST00000512683 BEND3Q5T5X7 828 aa15.96■□□□□ 0.15
VEGFA-216ENST00000512683 KIAA0825Q8IV33 1275 aa15.96■□□□□ 0.15
VEGFA-216ENST00000512683 MXD3Q9BW11 206 aa15.96■□□□□ 0.15
VEGFA-216ENST00000512683 SALL2Q9Y467 1007 aaPredicted RBP15.96■□□□□ 0.15
VEGFA-216ENST00000512683 MYO1BO43795 1136 aa15.95■□□□□ 0.14
VEGFA-216ENST00000512683 FOXO4P98177 505 aa15.95■□□□□ 0.14
VEGFA-216ENST00000512683 CCDC57Q2TAC2 916 aa15.95■□□□□ 0.14
VEGFA-216ENST00000512683 SUPT20HL1Q3ZLR7 823 aa15.95■□□□□ 0.14
VEGFA-216ENST00000512683 ZNF804AQ7Z570 1209 aa15.95■□□□□ 0.14
VEGFA-216ENST00000512683 DEFB129Q9H1M3 183 aa15.95■□□□□ 0.14
VEGFA-216ENST00000512683 PPP1R12BO60237 982 aaPredicted RBP15.94■□□□□ 0.14
VEGFA-216ENST00000512683 ALDH1L1O75891 902 aa15.94■□□□□ 0.14
VEGFA-216ENST00000512683 SASH1O94885 1247 aa15.94■□□□□ 0.14
VEGFA-216ENST00000512683 EXOSC9Q06265 439 aaKnown RBP15.94■□□□□ 0.14
VEGFA-216ENST00000512683 PRAMEF18Q5VWM3 479 aa15.94■□□□□ 0.14
VEGFA-216ENST00000512683 LDHAL6AQ6ZMR3 332 aa15.94■□□□□ 0.14
VEGFA-216ENST00000512683 MOB2Q70IA6 237 aa15.94■□□□□ 0.14
VEGFA-216ENST00000512683 IRS2Q9Y4H2 1338 aa15.94■□□□□ 0.14
VEGFA-216ENST00000512683 GPR25O00155 361 aa15.93■□□□□ 0.14
VEGFA-216ENST00000512683 GRM8O00222 908 aa15.93■□□□□ 0.14
VEGFA-216ENST00000512683 SLC34A2O95436 690 aa15.93■□□□□ 0.14
VEGFA-216ENST00000512683 PTPN12Q05209 780 aaKnown RBP15.93■□□□□ 0.14
VEGFA-216ENST00000512683 FAM9BQ8IZU0 186 aa15.93■□□□□ 0.14
VEGFA-216ENST00000512683 SLC10A4Q96EP9 437 aa15.93■□□□□ 0.14
VEGFA-216ENST00000512683 SPINK5Q9NQ38 1064 aaPredicted RBP15.93■□□□□ 0.14
VEGFA-216ENST00000512683 SCN9AQ15858 1988 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms