RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 HLA-CQ95604 372 aa9.51□□□□□ -0.89
USP46-208ENST00000512656 CNKSR1Q969H4 720 aa9.51□□□□□ -0.89
USP46-208ENST00000512656 AFDNP55196 1824 aaKnown RBP9.51□□□□□ -0.89
USP46-208ENST00000512656 GLTPD2A6NH11 291 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 WNT7AO00755 349 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 VEGFAP15692 232 aaPredicted RBP9.5□□□□□ -0.89
USP46-208ENST00000512656 TRIM32Q13049 653 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 TTLL12Q14166 644 aaPredicted RBP9.5□□□□□ -0.89
USP46-208ENST00000512656 STYK1Q6J9G0 422 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 NBPF5PQ86XG9 351 aaPredicted RBP9.5□□□□□ -0.89
USP46-208ENST00000512656 CYP4X1Q8N118 509 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 CRIPAKQ8N1N5 446 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 SMC1BQ8NDV3 1235 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 PNISRQ8TF01 805 aaKnown RBP9.5□□□□□ -0.89
USP46-208ENST00000512656 PNNQ9H307 717 aaKnown RBP9.5□□□□□ -0.89
USP46-208ENST00000512656 USP16Q9Y5T5 823 aa9.5□□□□□ -0.89
USP46-208ENST00000512656 SIPA1L3O60292 1781 aaPredicted RBP9.5□□□□□ -0.89
USP46-208ENST00000512656 NFKBIEO00221 500 aa9.49□□□□□ -0.89
USP46-208ENST00000512656 C21orf2O43822 256 aa9.49□□□□□ -0.89
USP46-208ENST00000512656 AVPP01185 164 aa9.49□□□□□ -0.89
USP46-208ENST00000512656 JUNDP17535 347 aa9.49□□□□□ -0.89
USP46-208ENST00000512656 TPTE2Q6XPS3 522 aa9.49□□□□□ -0.89
USP46-208ENST00000512656 MASTLQ96GX5 879 aa9.49□□□□□ -0.89
USP46-208ENST00000512656 SCN7AQ01118 1682 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 DLEC1Q9Y238 1755 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 FDX1P10109 184 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 SRGNP10124 158 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 DCTN1Q14203 1278 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 ERFEQ4G0M1 354 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 CCDC24Q8N4L8 307 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 DNAJC5GQ8N7S2 189 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 TAOK3Q9H2K8 898 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 LTBP3Q9NS15 1303 aa9.48□□□□□ -0.89
USP46-208ENST00000512656 TNRC6CQ9HCJ0 1690 aaKnown RBP9.48□□□□□ -0.89
USP46-208ENST00000512656 SBF1O95248 1867 aa9.47□□□□□ -0.89
USP46-208ENST00000512656 PRAMEF22A3QJZ6 481 aa9.47□□□□□ -0.89
USP46-208ENST00000512656 NPR1P16066 1061 aa9.47□□□□□ -0.89
USP46-208ENST00000512656 PIP4K2AP48426 406 aaPredicted RBP9.47□□□□□ -0.89
USP46-208ENST00000512656 GUCA2AQ02747 115 aa9.47□□□□□ -0.89
USP46-208ENST00000512656 DIXDC1Q155Q3 683 aa9.47□□□□□ -0.89
USP46-208ENST00000512656 PRPF40BQ6NWY9 871 aaKnown RBP9.47□□□□□ -0.89
USP46-208ENST00000512656 SPIRE2Q8WWL2 714 aa9.47□□□□□ -0.89
USP46-208ENST00000512656 NIP7Q9Y221 180 aaKnown RBP eCLIP9.47□□□□□ -0.89
USP46-208ENST00000512656 MAPK8IP3Q9UPT6 1336 aa9.47□□□□□ -0.89
USP46-208ENST00000512656 GTF2E1P29083 439 aaPredicted RBP9.46□□□□□ -0.9
USP46-208ENST00000512656 GJA5P36382 358 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 PRELPP51888 382 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 WNT7BP56706 349 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 NFE2L2Q16236 605 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 CTC1Q2NKJ3 1217 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 NBPF10Q6P3W6 841 aaKnown RBP9.46□□□□□ -0.9
USP46-208ENST00000512656 GIGYF2Q6Y7W6 1299 aaKnown RBP9.46□□□□□ -0.9
USP46-208ENST00000512656 NBPF15Q8N660 670 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 KLRG1Q96E93 195 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 AAASQ9NRG9 546 aa9.46□□□□□ -0.9
USP46-208ENST00000512656 ERVV-1B6SEH8 477 aa9.45□□□□□ -0.9
USP46-208ENST00000512656 ALDH1B1P30837 517 aa9.45□□□□□ -0.9
USP46-208ENST00000512656 CCDC93Q567U6 631 aa9.45□□□□□ -0.9
USP46-208ENST00000512656 KIF6Q6ZMV9 814 aa9.45□□□□□ -0.9
USP46-208ENST00000512656 SNIP1Q8TAD8 396 aaKnown RBP9.45□□□□□ -0.9
USP46-208ENST00000512656 NYXQ9GZU5 481 aa9.45□□□□□ -0.9
USP46-208ENST00000512656 MIS18AQ9NYP9 233 aa9.45□□□□□ -0.9
USP46-208ENST00000512656 ANKRD31Q8N7Z5 1873 aa9.45□□□□□ -0.9
USP46-208ENST00000512656 KLRG2A4D1S0 409 aaPredicted RBP9.44□□□□□ -0.9
USP46-208ENST00000512656 SPDYE5A6NIY4 337 aa9.44□□□□□ -0.9
USP46-208ENST00000512656 SMCPP49901 116 aaPredicted RBP9.44□□□□□ -0.9
USP46-208ENST00000512656 RTKN2Q8IZC4 609 aa9.44□□□□□ -0.9
USP46-208ENST00000512656 PCDHGC3Q9UN70 934 aa9.44□□□□□ -0.9
USP46-208ENST00000512656 BCORQ6W2J9 1755 aa9.44□□□□□ -0.9
USP46-208ENST00000512656 WDR90Q96KV7 1748 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 ERBB4Q15303 1308 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 TTC24A2A3L6 582 aaPredicted RBP9.43□□□□□ -0.9
USP46-208ENST00000512656 IQCA1LA6NCM1 817 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 FAM177BA6PVY3 158 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 EIF4A1P60842 406 aaKnown RBP9.43□□□□□ -0.9
USP46-208ENST00000512656 FKBP4Q02790 459 aaKnown RBP eCLIP9.43□□□□□ -0.9
USP46-208ENST00000512656 RALBP1Q15311 655 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 NGEFQ8N5V2 710 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 JMYQ8N9B5 988 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 C7orf43Q8WVR3 580 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 SYMPKQ92797 1274 aaKnown RBP9.43□□□□□ -0.9
USP46-208ENST00000512656 PLEKHF1Q96S99 279 aa9.43□□□□□ -0.9
USP46-208ENST00000512656 RRP7AQ9Y3A4 280 aaKnown RBP9.43□□□□□ -0.9
USP46-208ENST00000512656 COL11A2P13942 1736 aaPredicted RBP9.42□□□□□ -0.9
USP46-208ENST00000512656 TIAM2Q8IVF5 1701 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 MAP3K15Q6ZN16 1313 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 C6orf229H3BNL8 230 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 TRIM66O15016 1216 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 HTRA3P83110 453 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 LMOD3Q0VAK6 560 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 HLFQ16534 295 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 CC2D2BQ6DHV5 1058 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 DESI1Q6ICB0 168 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 NUDT12Q9BQG2 462 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 BEGAINQ9BUH8 593 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 BABAM1Q9NWV8 329 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 TSPYL4Q9UJ04 414 aa9.42□□□□□ -0.9
USP46-208ENST00000512656 PCNTO95613 3336 aa9.41□□□□□ -0.9
USP46-208ENST00000512656 IBTKQ9P2D0 1353 aaPredicted RBP9.41□□□□□ -0.9
USP46-208ENST00000512656 FER1L6Q2WGJ9 1857 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms