RNA–Protein interactions for RNA: ENST00000511988.5

SUB1-210, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 3

Gene SUB1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-210ENST00000511988 PUM3Q15397 648 aaKnown RBP12.49□□□□□ -0.41
SUB1-210ENST00000511988 AACSQ86V21 672 aa12.49□□□□□ -0.41
SUB1-210ENST00000511988 CNKSR1Q969H4 720 aa12.49□□□□□ -0.41
SUB1-210ENST00000511988 SLX4Q8IY92 1834 aa12.48□□□□□ -0.41
SUB1-210ENST00000511988 MX1P20591 662 aa12.48□□□□□ -0.41
SUB1-210ENST00000511988 CHRNDQ07001 517 aa12.48□□□□□ -0.41
SUB1-210ENST00000511988 ATP2B3Q16720 1220 aa12.48□□□□□ -0.41
SUB1-210ENST00000511988 MINPP1Q9UNW1 487 aa12.48□□□□□ -0.41
SUB1-210ENST00000511988 XDHP47989 1333 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 TTC41PQ6P2S7 1318 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 A0A1B0GUL7 405 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 HSPA8P11142 646 aaKnown RBP12.47□□□□□ -0.41
SUB1-210ENST00000511988 SLC5A1P13866 664 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 RGS3P49796 1198 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 LPIN2Q92539 896 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 ZNF622Q969S3 477 aaKnown RBP eCLIP12.47□□□□□ -0.41
SUB1-210ENST00000511988 EAF2Q96CJ1 260 aaPredicted RBP12.47□□□□□ -0.41
SUB1-210ENST00000511988 TMX4Q9H1E5 349 aaPredicted RBP12.47□□□□□ -0.41
SUB1-210ENST00000511988 OSBPL3Q9H4L5 887 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 CREBZFQ9NS37 354 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 STAP2Q9UGK3 403 aa12.47□□□□□ -0.41
SUB1-210ENST00000511988 IFIT1P09914 478 aaKnown RBP12.46□□□□□ -0.41
SUB1-210ENST00000511988 FGFR2P21802 821 aa12.46□□□□□ -0.41
SUB1-210ENST00000511988 CHRNA5P30532 468 aa12.46□□□□□ -0.41
SUB1-210ENST00000511988 UBE4AQ14139 1066 aa12.46□□□□□ -0.41
SUB1-210ENST00000511988 PRPF40BQ6NWY9 871 aaKnown RBP12.46□□□□□ -0.41
SUB1-210ENST00000511988 PLEKHM2Q8IWE5 1019 aa12.46□□□□□ -0.41
SUB1-210ENST00000511988 SP8Q8IXZ3 490 aa12.46□□□□□ -0.41
SUB1-210ENST00000511988 DBNLQ9UJU6 430 aaKnown RBP12.46□□□□□ -0.41
SUB1-210ENST00000511988 ATP6V0A2Q9Y487 856 aa12.46□□□□□ -0.41
SUB1-210ENST00000511988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.46□□□□□ -0.41
SUB1-210ENST00000511988 AK9Q5TCS8 1911 aa12.46□□□□□ -0.42
SUB1-210ENST00000511988 DUOX1Q9NRD9 1551 aa12.46□□□□□ -0.42
SUB1-210ENST00000511988 MYH13Q9UKX3 1938 aa12.46□□□□□ -0.42
SUB1-210ENST00000511988 ARFGEF1Q9Y6D6 1849 aa12.46□□□□□ -0.42
SUB1-210ENST00000511988 CNTNAP1P78357 1384 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 ERC2O15083 957 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 VEGFAP15692 232 aaPredicted RBP12.45□□□□□ -0.42
SUB1-210ENST00000511988 KCNJ4P48050 445 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 PDE1AP54750 535 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 GRIPAP1Q4V328 841 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 CC2D2BQ6DHV5 1058 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 OTUD7AQ8TE49 926 aaPredicted RBP12.45□□□□□ -0.42
SUB1-210ENST00000511988 ECHDC1Q9NTX5 307 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 WBP1LQ9NX94 342 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 PODXL2Q9NZ53 605 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 LEMD3Q9Y2U8 911 aa12.45□□□□□ -0.42
SUB1-210ENST00000511988 GLRX3O76003 335 aaKnown RBP12.44□□□□□ -0.42
SUB1-210ENST00000511988 DPEP1P16444 411 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 SKAP1Q86WV1 359 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 TTLL6Q8N841 843 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 HELBQ8NG08 1087 aaPredicted RBP12.44□□□□□ -0.42
SUB1-210ENST00000511988 NEUROD6Q96NK8 337 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 DBNDD2Q9BQY9 259 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 CCDC8Q9H0W5 538 aaPredicted RBP12.44□□□□□ -0.42
SUB1-210ENST00000511988 BCL11AQ9H165 835 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 TLR7Q9NYK1 1049 aaKnown RBP12.44□□□□□ -0.42
SUB1-210ENST00000511988 ANKIB1Q9P2G1 1089 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 SNED1Q8TER0 1413 aa12.44□□□□□ -0.42
SUB1-210ENST00000511988 ZNF804BA4D1E1 1349 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 TAF5LO75529 589 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 ATP2B4P23634 1241 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 VEGFBP49765 207 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 BMP2KLQ5H9B9 411 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 GORABQ5T7V8 394 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 TTC22Q5TAA0 569 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 SOGA3Q5TF21 947 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 XAGE2Q96GT9 111 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 RNF39Q9H2S5 420 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 RNF216Q9NWF9 866 aaPredicted RBP12.43□□□□□ -0.42
SUB1-210ENST00000511988 PIM2Q9P1W9 311 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 GGA1Q9UJY5 639 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 MED23Q9ULK4 1368 aa12.43□□□□□ -0.42
SUB1-210ENST00000511988 UFL1O94874 794 aa12.42□□□□□ -0.42
SUB1-210ENST00000511988 ATP5JP18859 108 aa12.42□□□□□ -0.42
SUB1-210ENST00000511988 KCNA3P22001 575 aa12.42□□□□□ -0.42
SUB1-210ENST00000511988 TIMM10P62072 90 aa12.42□□□□□ -0.42
SUB1-210ENST00000511988 GPSM2P81274 684 aa12.42□□□□□ -0.42
SUB1-210ENST00000511988 CCDC158Q5M9N0 1113 aa12.42□□□□□ -0.42
SUB1-210ENST00000511988 C15orf52Q6ZUT6 534 aaKnown RBP12.42□□□□□ -0.42
SUB1-210ENST00000511988 PI4K2BQ8TCG2 481 aa12.42□□□□□ -0.42
SUB1-210ENST00000511988 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.42□□□□□ -0.42
SUB1-210ENST00000511988 ZNF512BQ96KM6 892 aaPredicted RBP12.42□□□□□ -0.42
SUB1-210ENST00000511988 AKAP11Q9UKA4 1901 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 ZBTB22O15209 634 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 UQCRFS1P1P0C7P4 283 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 ADORA1P30542 326 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 FER1L6Q2WGJ9 1857 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 CCDC93Q567U6 631 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 CAVIN4Q5BKX8 364 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 DALRD3Q5D0E6 543 aaKnown RBP12.41□□□□□ -0.42
SUB1-210ENST00000511988 TTC39AQ5SRH9 613 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 DPP8Q6V1X1 898 aaPredicted RBP12.41□□□□□ -0.42
SUB1-210ENST00000511988 MPNDQ8N594 471 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 C7orf43Q8WVR3 580 aa12.41□□□□□ -0.42
SUB1-210ENST00000511988 NSFL1CQ9UNZ2 370 aaKnown RBP12.41□□□□□ -0.42
SUB1-210ENST00000511988 IRS2Q9Y4H2 1338 aa12.4□□□□□ -0.42
SUB1-210ENST00000511988 DOCK2Q92608 1830 aa12.4□□□□□ -0.42
SUB1-210ENST00000511988 ARID4AP29374 1257 aaPredicted RBP12.4□□□□□ -0.42
SUB1-210ENST00000511988 TSHZ3Q63HK5 1081 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms