RNA–Protein interactions for RNA: ENST00000511871.1

SIM1-204, Transcript of SIM bHLH transcription factor 1, humanhuman

TSL 1 (best)

Gene SIM1, Length 1,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-204ENST00000511871 EPHX2P34913 555 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 UBE4AQ14139 1066 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 METTL24Q5JXM2 366 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 VGLL2Q8N8G2 317 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 COPRSQ9NQ92 184 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 GPRC5DQ9NZD1 345 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 FBXO3Q9UK99 471 aa20.05■□□□□ 0.8
SIM1-204ENST00000511871 EPS15P42566 896 aa20.04■□□□□ 0.8
SIM1-204ENST00000511871 ATG9AQ7Z3C6 839 aa20.04■□□□□ 0.8
SIM1-204ENST00000511871 SRGAP3O43295 1099 aa20.03■□□□□ 0.8
SIM1-204ENST00000511871 CIAO1O76071 339 aa20.03■□□□□ 0.8
SIM1-204ENST00000511871 PDE8BO95263 885 aa20.03■□□□□ 0.8
SIM1-204ENST00000511871 VIL1P09327 827 aaKnown RBP20.03■□□□□ 0.8
SIM1-204ENST00000511871 PA2G4Q9UQ80 394 aaKnown RBP20.03■□□□□ 0.8
SIM1-204ENST00000511871 MVPQ14764 893 aaKnown RBP20.02■□□□□ 0.8
SIM1-204ENST00000511871 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.02■□□□□ 0.8
SIM1-204ENST00000511871 SIL1Q9H173 461 aa20.02■□□□□ 0.8
SIM1-204ENST00000511871 ZBTB12Q9Y330 459 aaPredicted RBP20.02■□□□□ 0.8
SIM1-204ENST00000511871 POTEIP0CG38 1075 aa20.02■□□□□ 0.79
SIM1-204ENST00000511871 POTEJP0CG39 1038 aa20.02■□□□□ 0.79
SIM1-204ENST00000511871 DPF2Q92785 391 aa20.02■□□□□ 0.79
SIM1-204ENST00000511871 C1orf115Q9H7X2 142 aa20.02■□□□□ 0.79
SIM1-204ENST00000511871 CD209Q9NNX6 404 aa20.02■□□□□ 0.79
SIM1-204ENST00000511871 ZNF609O15014 1411 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 PNMA6EA0A0J9YXQ4 647 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 USP17L3A6NCW0 530 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 USP17L4A6NCW7 530 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 RPS12P25398 132 aaKnown RBP20.01■□□□□ 0.79
SIM1-204ENST00000511871 FSTL1Q12841 308 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 PDE3AQ14432 1141 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 USP17L1Q7RTZ2 530 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 PNMA8AQ86V59 439 aaPredicted RBP20.01■□□□□ 0.79
SIM1-204ENST00000511871 SMC1BQ8NDV3 1235 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 COG6Q9Y2V7 657 aa20.01■□□□□ 0.79
SIM1-204ENST00000511871 MYH13Q9UKX3 1938 aa20■□□□□ 0.79
SIM1-204ENST00000511871 RSBN1LQ6PCB5 846 aaPredicted RBP20■□□□□ 0.79
SIM1-204ENST00000511871 ZNF804AQ7Z570 1209 aa20■□□□□ 0.79
SIM1-204ENST00000511871 CNOT7Q9UIV1 285 aaKnown RBP20■□□□□ 0.79
SIM1-204ENST00000511871 POLR2AP24928 1970 aaKnown RBP19.99■□□□□ 0.79
SIM1-204ENST00000511871 SHTN1A0MZ66 631 aa19.99■□□□□ 0.79
SIM1-204ENST00000511871 IL15P40933 162 aaPredicted RBP19.99■□□□□ 0.79
SIM1-204ENST00000511871 ATP8B2P98198 1209 aa19.99■□□□□ 0.79
SIM1-204ENST00000511871 EAPPQ56P03 285 aaPredicted RBP19.99■□□□□ 0.79
SIM1-204ENST00000511871 C20orf194Q5TEA3 1177 aa19.99■□□□□ 0.79
SIM1-204ENST00000511871 LDHDQ86WU2 507 aa19.99■□□□□ 0.79
SIM1-204ENST00000511871 ADARB2Q9NS39 739 aaKnown RBP19.99■□□□□ 0.79
SIM1-204ENST00000511871 DDX19BQ9UMR2 479 aa19.99■□□□□ 0.79
SIM1-204ENST00000511871 ARAP2Q8WZ64 1704 aa19.99■□□□□ 0.79
SIM1-204ENST00000511871 IL1R1P14778 569 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 FGFR2P21802 821 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 POLA2Q14181 598 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 DACT2Q5SW24 774 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 STRIP1Q5VSL9 837 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 CHADLQ6NUI6 762 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 USP50Q70EL3 339 aaPredicted RBP19.98■□□□□ 0.79
SIM1-204ENST00000511871 FAM84BQ96KN1 310 aaPredicted RBP19.98■□□□□ 0.79
SIM1-204ENST00000511871 GYG1P46976 350 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 PUM3Q15397 648 aaKnown RBP19.98■□□□□ 0.79
SIM1-204ENST00000511871 MICALL2Q8IY33 904 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 AGBL3Q8NEM8 1001 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 SSH3Q8TE77 659 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 GMLQ99445 158 aa19.98■□□□□ 0.79
SIM1-204ENST00000511871 H7C1D1 291 aa19.97■□□□□ 0.79
SIM1-204ENST00000511871 HIBADHP31937 336 aaKnown RBP19.97■□□□□ 0.79
SIM1-204ENST00000511871 CEP126Q9P2H0 1117 aa19.97■□□□□ 0.79
SIM1-204ENST00000511871 GTF2IP78347 998 aa19.96■□□□□ 0.79
SIM1-204ENST00000511871 TTLL5Q6EMB2 1281 aa19.96■□□□□ 0.79
SIM1-204ENST00000511871 FBXO33Q7Z6M2 555 aa19.96■□□□□ 0.79
SIM1-204ENST00000511871 MXD3Q9BW11 206 aa19.96■□□□□ 0.79
SIM1-204ENST00000511871 CLEC11AQ9Y240 323 aa19.96■□□□□ 0.79
SIM1-204ENST00000511871 IFIT1P09914 478 aaKnown RBP19.95■□□□□ 0.78
SIM1-204ENST00000511871 CEP85Q6P2H3 762 aa19.95■□□□□ 0.78
SIM1-204ENST00000511871 TDRD7Q8NHU6 1098 aaKnown RBP19.95■□□□□ 0.78
SIM1-204ENST00000511871 FBXW7Q969H0 707 aa19.95■□□□□ 0.78
SIM1-204ENST00000511871 ZBTB40Q9NUA8 1239 aa19.95■□□□□ 0.78
SIM1-204ENST00000511871 TRPM4Q8TD43 1214 aa19.94■□□□□ 0.78
SIM1-204ENST00000511871 LPIN2Q92539 896 aa19.94■□□□□ 0.78
SIM1-204ENST00000511871 MYO3BQ8WXR4 1341 aa19.94■□□□□ 0.78
SIM1-204ENST00000511871 SLC5A1P13866 664 aa19.94■□□□□ 0.78
SIM1-204ENST00000511871 HSPA6P17066 643 aa19.94■□□□□ 0.78
SIM1-204ENST00000511871 HIRAP54198 1017 aaPredicted RBP19.94■□□□□ 0.78
SIM1-204ENST00000511871 ATP2B3Q16720 1220 aa19.94■□□□□ 0.78
SIM1-204ENST00000511871 CHMP4BQ9H444 224 aaKnown RBP19.94■□□□□ 0.78
SIM1-204ENST00000511871 SASH1O94885 1247 aa19.93■□□□□ 0.78
SIM1-204ENST00000511871 RRP1P56182 461 aaKnown RBP19.93■□□□□ 0.78
SIM1-204ENST00000511871 ZNF280AP59817 542 aaPredicted RBP19.93■□□□□ 0.78
SIM1-204ENST00000511871 CAVIN4Q5BKX8 364 aa19.93■□□□□ 0.78
SIM1-204ENST00000511871 SAMD7Q7Z3H4 446 aa19.93■□□□□ 0.78
SIM1-204ENST00000511871 FAM205AQ6ZU69 1335 aa19.92■□□□□ 0.78
SIM1-204ENST00000511871 TRPM7Q96QT4 1865 aa19.92■□□□□ 0.78
SIM1-204ENST00000511871 EGFRP00533 1210 aa19.92■□□□□ 0.78
SIM1-204ENST00000511871 USP17L8P0C7I0 530 aa19.92■□□□□ 0.78
SIM1-204ENST00000511871 BCAMP50895 628 aa19.92■□□□□ 0.78
SIM1-204ENST00000511871 TFCP2Q12800 502 aa19.92■□□□□ 0.78
SIM1-204ENST00000511871 G3BP1Q13283 466 aaKnown RBP eCLIP19.92■□□□□ 0.78
SIM1-204ENST00000511871 TBC1D10BQ4KMP7 808 aaPredicted RBP19.92■□□□□ 0.78
SIM1-204ENST00000511871 FKBP1AP62942 108 aaKnown RBP19.91■□□□□ 0.78
SIM1-204ENST00000511871 MAP1SQ66K74 1059 aaPredicted RBP19.91■□□□□ 0.78
SIM1-204ENST00000511871 VPS37DQ86XT2 251 aa19.91■□□□□ 0.78
SIM1-204ENST00000511871 CERS5Q8N5B7 392 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms