RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 FZD6O60353 706 aa5.87□□□□□ -1.47
CHD1-207ENST00000511628 ADAM23O75077 832 aa5.87□□□□□ -1.47
CHD1-207ENST00000511628 TNFRSF21O75509 655 aa5.87□□□□□ -1.47
CHD1-207ENST00000511628 IREB2P48200 963 aaKnown RBP5.87□□□□□ -1.47
CHD1-207ENST00000511628 ADGRE1Q14246 886 aa5.87□□□□□ -1.47
CHD1-207ENST00000511628 TXNDC11Q6PKC3 985 aa5.87□□□□□ -1.47
CHD1-207ENST00000511628 CEP120Q8N960 986 aa5.87□□□□□ -1.47
CHD1-207ENST00000511628 MRPL18Q9H0U6 180 aaKnown RBP5.87□□□□□ -1.47
CHD1-207ENST00000511628 BIN2Q9UBW5 565 aaPredicted RBP5.87□□□□□ -1.47
CHD1-207ENST00000511628 AMOTL2Q9Y2J4 779 aa5.87□□□□□ -1.47
CHD1-207ENST00000511628 EREGO14944 169 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 DEAF1O75398 565 aaPredicted RBP5.86□□□□□ -1.47
CHD1-207ENST00000511628 ARL4DP49703 201 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 PDE3BQ13370 1112 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 WFDC12Q8WWY7 111 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 TP53INP1Q96A56 240 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 OSMRQ99650 979 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 AKTIPQ9H8T0 292 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 SH2B1Q9NRF2 756 aaPredicted RBP5.86□□□□□ -1.47
CHD1-207ENST00000511628 TPSG1Q9NRR2 321 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 SALL4Q9UJQ4 1053 aa5.86□□□□□ -1.47
CHD1-207ENST00000511628 FOXD3Q9UJU5 478 aaPredicted RBP5.86□□□□□ -1.47
CHD1-207ENST00000511628 ASAP3Q8TDY4 903 aa5.85□□□□□ -1.47
CHD1-207ENST00000511628 SLC7A3Q8WY07 619 aa5.85□□□□□ -1.47
CHD1-207ENST00000511628 POP1Q99575 1024 aaKnown RBP5.85□□□□□ -1.47
CHD1-207ENST00000511628 CARD10Q9BWT7 1032 aa5.85□□□□□ -1.47
CHD1-207ENST00000511628 DLL1O00548 723 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 FSCN2O14926 492 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 TRPA1O75762 1119 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 PDIA4P13667 645 aaKnown RBP5.84□□□□□ -1.47
CHD1-207ENST00000511628 ACPPP15309 386 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 GLB1P16278 677 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 CD68P34810 354 aaPredicted RBP5.84□□□□□ -1.47
CHD1-207ENST00000511628 SETDB1Q15047 1291 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 GJD3Q8N144 294 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 SEC31BQ9NQW1 1179 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 DZANK1Q9NVP4 752 aa5.84□□□□□ -1.47
CHD1-207ENST00000511628 H3BRJ5 948 aa5.83□□□□□ -1.48
CHD1-207ENST00000511628 BRD1O95696 1058 aa5.83□□□□□ -1.48
CHD1-207ENST00000511628 POLR3DP05423 398 aaPredicted RBP5.83□□□□□ -1.48
CHD1-207ENST00000511628 EPHA1P21709 976 aa5.83□□□□□ -1.48
CHD1-207ENST00000511628 DUOXA2Q1HG44 320 aa5.83□□□□□ -1.48
CHD1-207ENST00000511628 KLHL23Q8NBE8 558 aa5.83□□□□□ -1.48
CHD1-207ENST00000511628 CHRDQ9H2X0 955 aa5.83□□□□□ -1.48
CHD1-207ENST00000511628 ZFYVE28Q9HCC9 887 aa5.83□□□□□ -1.48
CHD1-207ENST00000511628 ALX3O95076 343 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 NOS3P29474 1203 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 PIP4K2BP78356 416 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 ACAD11Q709F0 780 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 TXNDC2Q86VQ3 553 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 TMEM102Q8N9M5 508 aaPredicted RBP5.82□□□□□ -1.48
CHD1-207ENST00000511628 BSNDQ8WZ55 320 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 ZKSCAN3Q9BRR0 538 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 TRAIPQ9BWF2 469 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 ADAM19Q9H013 955 aa5.82□□□□□ -1.48
CHD1-207ENST00000511628 SART1O43290 800 aaKnown RBP5.81□□□□□ -1.48
CHD1-207ENST00000511628 DYRK3O43781 588 aa5.81□□□□□ -1.48
CHD1-207ENST00000511628 IKBKEQ14164 716 aa5.81□□□□□ -1.48
CHD1-207ENST00000511628 RSPO4Q2I0M5 234 aaPredicted RBP5.81□□□□□ -1.48
CHD1-207ENST00000511628 HHIPQ96QV1 700 aa5.81□□□□□ -1.48
CHD1-207ENST00000511628 CITED4Q96RK1 184 aa5.81□□□□□ -1.48
CHD1-207ENST00000511628 CEP41Q9BYV8 373 aa5.81□□□□□ -1.48
CHD1-207ENST00000511628 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.81□□□□□ -1.48
CHD1-207ENST00000511628 SOWAHDA6NJG2 315 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 F8W735 103 aaPredicted RBP5.8□□□□□ -1.48
CHD1-207ENST00000511628 CPNE3O75131 537 aaKnown RBP5.8□□□□□ -1.48
CHD1-207ENST00000511628 NLRP12P59046 1061 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 ARHGAP4P98171 946 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 C19orf57Q0VDD7 668 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 ILDR2Q71H61 639 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 AGGF1Q8N302 714 aaeCLIP5.8□□□□□ -1.48
CHD1-207ENST00000511628 TMEM130Q8N3G9 435 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 GALNT11Q8NCW6 608 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 WNT8BQ93098 351 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 NXPE3Q969Y0 559 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 KLHDC7BQ96G42 594 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 NIF3L1Q9GZT8 377 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 OSGEPQ9NPF4 335 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 LATS2Q9NRM7 1088 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 PODXL2Q9NZ53 605 aa5.8□□□□□ -1.48
CHD1-207ENST00000511628 SCO2A0A1W2PP80 73 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 GADD45BO75293 160 aaPredicted RBP5.79□□□□□ -1.48
CHD1-207ENST00000511628 H2AFB1P0C5Y9 115 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 H2AFB2P0C5Z0 115 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 MAPK1P28482 360 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 MEGF10Q96KG7 1140 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 USP26Q9BXU7 913 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 EHD4Q9H223 541 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 LIN7BQ9HAP6 207 aa5.79□□□□□ -1.48
CHD1-207ENST00000511628 NFKBIEO00221 500 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 DDX3YO15523 660 aaKnown RBP5.78□□□□□ -1.48
CHD1-207ENST00000511628 EIF4EBP3O60516 100 aaPredicted RBP5.78□□□□□ -1.48
CHD1-207ENST00000511628 FOXD4L6Q3SYB3 417 aaPredicted RBP5.78□□□□□ -1.48
CHD1-207ENST00000511628 NKAPLQ5M9Q1 402 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 ZMYM1Q5SVZ6 1142 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 FDX2Q6P4F2 183 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 FOXD4L3Q6VB84 417 aaPredicted RBP5.78□□□□□ -1.48
CHD1-207ENST00000511628 GALNT12Q8IXK2 581 aa5.78□□□□□ -1.48
CHD1-207ENST00000511628 DDX54Q8TDD1 881 aaKnown RBP5.78□□□□□ -1.48
CHD1-207ENST00000511628 UBASH3BQ8TF42 649 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms