RNA–Protein interactions for RNA: ENST00000510940.1

LETM1-204, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 2

Gene LETM1, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-204ENST00000510940 EYA3Q99504 573 aa16.44■□□□□ 0.22
LETM1-204ENST00000510940 DBNDD2Q9BQY9 259 aa16.44■□□□□ 0.22
LETM1-204ENST00000510940 DBNLQ9UJU6 430 aaKnown RBP16.44■□□□□ 0.22
LETM1-204ENST00000510940 ARAP2Q8WZ64 1704 aa16.43■□□□□ 0.22
LETM1-204ENST00000510940 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
LETM1-204ENST00000510940 DPP8Q6V1X1 898 aaPredicted RBP16.43■□□□□ 0.22
LETM1-204ENST00000510940 C15orf52Q6ZUT6 534 aaKnown RBP16.43■□□□□ 0.22
LETM1-204ENST00000510940 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
LETM1-204ENST00000510940 UFL1O94874 794 aa16.42■□□□□ 0.22
LETM1-204ENST00000510940 GPSM2P81274 684 aa16.42■□□□□ 0.22
LETM1-204ENST00000510940 CCDC93Q567U6 631 aa16.42■□□□□ 0.22
LETM1-204ENST00000510940 TICAM2Q86XR7 235 aa16.42■□□□□ 0.22
LETM1-204ENST00000510940 C6orf229H3BNL8 230 aa16.41■□□□□ 0.22
LETM1-204ENST00000510940 SEMA3EO15041 775 aa16.41■□□□□ 0.22
LETM1-204ENST00000510940 ZBTB22O15209 634 aa16.41■□□□□ 0.22
LETM1-204ENST00000510940 GRIN3BO60391 1043 aa16.41■□□□□ 0.22
LETM1-204ENST00000510940 KCNA3P22001 575 aa16.41■□□□□ 0.22
LETM1-204ENST00000510940 LRRFIP1Q32MZ4 808 aaKnown RBP16.41■□□□□ 0.22
LETM1-204ENST00000510940 ZNF804AQ7Z570 1209 aa16.41■□□□□ 0.22
LETM1-204ENST00000510940 CNTROBQ8N137 903 aa16.41■□□□□ 0.22
LETM1-204ENST00000510940 OTUD7AQ8TE49 926 aaPredicted RBP16.41■□□□□ 0.22
LETM1-204ENST00000510940 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.41■□□□□ 0.22
LETM1-204ENST00000510940 COL4A1P02462 1669 aa16.4■□□□□ 0.22
LETM1-204ENST00000510940 HIBADHP31937 336 aaKnown RBP16.4■□□□□ 0.22
LETM1-204ENST00000510940 CASC1Q6TDU7 716 aa16.4■□□□□ 0.22
LETM1-204ENST00000510940 VPS33BQ9H267 617 aa16.4■□□□□ 0.22
LETM1-204ENST00000510940 TLR7Q9NYK1 1049 aaKnown RBP16.4■□□□□ 0.22
LETM1-204ENST00000510940 MED23Q9ULK4 1368 aa16.39■□□□□ 0.21
LETM1-204ENST00000510940 TRIM6-TRIM34B2RNG4 842 aa16.39■□□□□ 0.21
LETM1-204ENST00000510940 ARID4AP29374 1257 aaPredicted RBP16.39■□□□□ 0.21
LETM1-204ENST00000510940 TTF1Q15361 905 aaPredicted RBP16.39■□□□□ 0.21
LETM1-204ENST00000510940 CCDC102BQ68D86 513 aa16.39■□□□□ 0.21
LETM1-204ENST00000510940 TBC1D16Q8TBP0 767 aa16.39■□□□□ 0.21
LETM1-204ENST00000510940 PI4K2BQ8TCG2 481 aa16.39■□□□□ 0.21
LETM1-204ENST00000510940 C7orf43Q8WVR3 580 aa16.39■□□□□ 0.21
LETM1-204ENST00000510940 ZC3H12CQ9C0D7 883 aaKnown RBP16.39■□□□□ 0.21
LETM1-204ENST00000510940 BRCA1P38398 1863 aaKnown RBP16.39■□□□□ 0.21
LETM1-204ENST00000510940 KIAA1551Q9HCM1 1747 aa16.39■□□□□ 0.21
LETM1-204ENST00000510940 G3V3G9 751 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 C21orf2O43822 256 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 FRAT2O75474 233 aaPredicted RBP16.38■□□□□ 0.21
LETM1-204ENST00000510940 ADORA1P30542 326 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 GPR162Q16538 588 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 DCAF8Q5TAQ9 597 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 FBXO33Q7Z6M2 555 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 EVI5LQ96CN4 794 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 HAUS7Q99871 368 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
LETM1-204ENST00000510940 DENND2AQ9ULE3 1009 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 AK9Q5TCS8 1911 aa16.38■□□□□ 0.21
LETM1-204ENST00000510940 HIP1O00291 1037 aa16.37■□□□□ 0.21
LETM1-204ENST00000510940 IGSF3O75054 1194 aa16.37■□□□□ 0.21
LETM1-204ENST00000510940 WASHC4Q2M389 1173 aa16.37■□□□□ 0.21
LETM1-204ENST00000510940 SKAP1Q86WV1 359 aa16.37■□□□□ 0.21
LETM1-204ENST00000510940 FAM84BQ96KN1 310 aaPredicted RBP16.37■□□□□ 0.21
LETM1-204ENST00000510940 PSMD1Q99460 953 aa16.37■□□□□ 0.21
LETM1-204ENST00000510940 BOLA2Q9H3K6 86 aa16.37■□□□□ 0.21
LETM1-204ENST00000510940 PHKA1P46020 1223 aa16.36■□□□□ 0.21
LETM1-204ENST00000510940 RILPL2Q969X0 211 aa16.36■□□□□ 0.21
LETM1-204ENST00000510940 COA1Q9GZY4 146 aa16.36■□□□□ 0.21
LETM1-204ENST00000510940 POLLQ9UGP5 575 aa16.36■□□□□ 0.21
LETM1-204ENST00000510940 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
LETM1-204ENST00000510940 PDS5AQ29RF7 1337 aaKnown RBP16.36■□□□□ 0.21
LETM1-204ENST00000510940 LTBP1Q14766 1721 aa16.36■□□□□ 0.21
LETM1-204ENST00000510940 GYG1P46976 350 aa16.35■□□□□ 0.21
LETM1-204ENST00000510940 BCAMP50895 628 aa16.35■□□□□ 0.21
LETM1-204ENST00000510940 TSHZ3Q63HK5 1081 aa16.35■□□□□ 0.21
LETM1-204ENST00000510940 ZGPATQ8N5A5 531 aaKnown RBP16.35■□□□□ 0.21
LETM1-204ENST00000510940 DNAJC2Q99543 621 aaKnown RBP16.35■□□□□ 0.21
LETM1-204ENST00000510940 PAG1Q9NWQ8 432 aa16.35■□□□□ 0.21
LETM1-204ENST00000510940 ZNF219Q9P2Y4 722 aaPredicted RBP16.35■□□□□ 0.21
LETM1-204ENST00000510940 ARFGEF1Q9Y6D6 1849 aa16.35■□□□□ 0.21
LETM1-204ENST00000510940 MYH13Q9UKX3 1938 aa16.35■□□□□ 0.21
LETM1-204ENST00000510940 SNAP23O00161 211 aa16.34■□□□□ 0.21
LETM1-204ENST00000510940 GSPT1P15170 499 aaKnown RBP16.34■□□□□ 0.21
LETM1-204ENST00000510940 SDSP20132 328 aa16.34■□□□□ 0.21
LETM1-204ENST00000510940 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
LETM1-204ENST00000510940 TMED8Q6PL24 325 aaPredicted RBP16.34■□□□□ 0.21
LETM1-204ENST00000510940 SPATA5Q8NB90 893 aa16.34■□□□□ 0.21
LETM1-204ENST00000510940 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.34■□□□□ 0.214e-6■□□□□ 11.1
LETM1-204ENST00000510940 RFX7Q2KHR2 1363 aa16.34■□□□□ 0.21
LETM1-204ENST00000510940 CDC45O75419 566 aa16.33■□□□□ 0.2
LETM1-204ENST00000510940 ZSCAN25Q6NSZ9 544 aa16.33■□□□□ 0.2
LETM1-204ENST00000510940 WDR66Q8TBY9 1149 aa16.33■□□□□ 0.2
LETM1-204ENST00000510940 IL1R1P14778 569 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 MCAMP43121 646 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 KIAA2012Q0VF49 1180 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 SPTY2D1Q68D10 685 aaPredicted RBP16.32■□□□□ 0.2
LETM1-204ENST00000510940 PODNQ7Z5L7 613 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 NLGN2Q8NFZ4 835 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 TDRD7Q8NHU6 1098 aaKnown RBP16.32■□□□□ 0.2
LETM1-204ENST00000510940 TBC1D22AQ8WUA7 517 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 RUFY2Q8WXA3 655 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 FSD1Q9BTV5 496 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 TAOK3Q9H2K8 898 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 CD209Q9NNX6 404 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 AKAP11Q9UKA4 1901 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 IRS2Q9Y4H2 1338 aa16.32■□□□□ 0.2
LETM1-204ENST00000510940 DUOX1Q9NRD9 1551 aa16.31■□□□□ 0.2
LETM1-204ENST00000510940 LTBP3Q9NS15 1303 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms