RNA–Protein interactions for RNA: ENST00000510566.1

UCHL1-208, Transcript of ubiquitin C-terminal hydrolase L1, human

TSL 2

Gene UCHL1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UCHL1-208	ENST00000510566	GPC2	Q8N158	579 aa		10.88	□□□□□ -0.67
UCHL1-208	ENST00000510566	DDX27	Q96GQ7	796 aa	Known RBP	10.88	□□□□□ -0.67
UCHL1-208	ENST00000510566	C9orf78	Q9NZ63	289 aa	Predicted RBP	10.88	□□□□□ -0.67
UCHL1-208	ENST00000510566	ANKIB1	Q9P2G1	1089 aa		10.88	□□□□□ -0.67
UCHL1-208	ENST00000510566	NSFL1C	Q9UNZ2	370 aa	Known RBP	10.88	□□□□□ -0.67
UCHL1-208	ENST00000510566	PTPRC	P08575	1304 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	LRRC37A	A6NMS7	1700 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	TNIP1	Q15025	636 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	WASHC4	Q2M389	1173 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	SLC4A10	Q6U841	1118 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	UBE3B	Q7Z3V4	1068 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	MPHOSPH8	Q99549	860 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	HACL1	Q9UJ83	578 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	HDAC5	Q9UQL6	1122 aa		10.87	□□□□□ -0.67
UCHL1-208	ENST00000510566	ZNF521	Q96K83	1311 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	FZD9	O00144	591 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	DDN	O94850	711 aa	Predicted RBP	10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	FOXK1	P85037	733 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	GCKR	Q14397	625 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	AOC3	Q16853	763 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	CWF19L2	Q2TBE0	894 aa	Known RBP	10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	ALDH1L2	Q3SY69	923 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	TAF7L	Q5H9L4	462 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	PPP1R15B	Q5SWA1	713 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	RTFDC1	Q9BY42	306 aa	Predicted RBP	10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	ZC3H12C	Q9C0D7	883 aa	Known RBP	10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	SRCIN1	Q9C0H9	1055 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	WDR70	Q9NW82	654 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	GJA3	Q9Y6H8	435 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	SPEF2	Q9C093	1822 aa		10.86	□□□□□ -0.67
UCHL1-208	ENST00000510566	ALDH1L1	O75891	902 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	SLFN5	Q08AF3	891 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	KIAA2012	Q0VF49	1180 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	DSG2	Q14126	1118 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	OLFM4	Q6UX06	510 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	G2E3	Q7L622	706 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	BCL2L13	Q9BXK5	485 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	SMC4	Q9NTJ3	1288 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	GGA1	Q9UJY5	639 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	ZNRF3	Q9ULT6	936 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	CHMP3	Q9Y3E7	222 aa		10.85	□□□□□ -0.67
UCHL1-208	ENST00000510566	XDH	P47989	1333 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	ANKRD18B	A2A2Z9	1011 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	IGKV5-2	P06315	115 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	ATP2B4	P23634	1241 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	KCNJ4	P48050	445 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	PRELP	P51888	382 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	IFIT5	Q13325	482 aa	Known RBP	10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	CCDC57	Q2TAC2	916 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	EAPP	Q56P03	285 aa	Predicted RBP	10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	CIAPIN1	Q6FI81	312 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	LDHD	Q86WU2	507 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	CELF1	Q92879	486 aa	Known RBP	10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	PLA2G12B	Q9BX93	195 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	RTL9	Q8NET4	1388 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566	KIF16B	Q96L93	1317 aa		10.84	□□□□□ -0.67
UCHL1-208	ENST00000510566		H7C1W4	665 aa		10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	GRM8	O00222	908 aa		10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	UFL1	O94874	794 aa		10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	EPHX2	P34913	555 aa		10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	TTLL11	Q8NHH1	800 aa		10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	CCDC85A	Q96PX6	553 aa	Predicted RBP	10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	ANKRD2	Q9GZV1	360 aa		10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	BSDC1	Q9NW68	430 aa	Predicted RBP	10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566	PODXL2	Q9NZ53	605 aa		10.83	□□□□□ -0.68
UCHL1-208	ENST00000510566		F6X3S4	739 aa		10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566		H7C1D1	291 aa		10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	IPO8	O15397	1037 aa	Known RBP	10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	ITGA6	P23229	1130 aa		10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	HNRNPU	Q00839	825 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	PLPP6	Q8IY26	295 aa		10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	SNED1	Q8TER0	1413 aa		10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	ZNF541	Q9H0D2	1346 aa		10.82	□□□□□ -0.68
UCHL1-208	ENST00000510566	RPS12	P25398	132 aa	Known RBP	10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	GPSM2	P81274	684 aa		10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	BEND3	Q5T5X7	828 aa		10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	USP50	Q70EL3	339 aa	Predicted RBP	10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	JARID2	Q92833	1246 aa	Predicted RBP	10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	API5	Q9BZZ5	524 aa	Known RBP	10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	GREM2	Q9H772	168 aa		10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	SEC31B	Q9NQW1	1179 aa		10.81	□□□□□ -0.68
UCHL1-208	ENST00000510566	CCT4	P50991	539 aa	Known RBP	10.8	□□□□□ -0.68
UCHL1-208	ENST00000510566	MRPL50	Q8N5N7	158 aa	Known RBP	10.8	□□□□□ -0.68
UCHL1-208	ENST00000510566	TBC1D16	Q8TBP0	767 aa		10.8	□□□□□ -0.68
UCHL1-208	ENST00000510566	ADARB2	Q9NS39	739 aa	Known RBP	10.8	□□□□□ -0.68
UCHL1-208	ENST00000510566	LEMD3	Q9Y2U8	911 aa		10.8	□□□□□ -0.68
UCHL1-208	ENST00000510566	ECE2	O60344	883 aa		10.79	□□□□□ -0.68
UCHL1-208	ENST00000510566	RAD17	O75943	681 aa		10.79	□□□□□ -0.68
UCHL1-208	ENST00000510566	FAM161A	Q3B820	660 aa		10.79	□□□□□ -0.68
UCHL1-208	ENST00000510566	PODN	Q7Z5L7	613 aa		10.79	□□□□□ -0.68
UCHL1-208	ENST00000510566	SSH1	Q8WYL5	1049 aa		10.79	□□□□□ -0.68
UCHL1-208	ENST00000510566	DBNDD1	Q9H9R9	158 aa		10.79	□□□□□ -0.68
UCHL1-208	ENST00000510566	CNNM1	Q9NRU3	951 aa		10.79	□□□□□ -0.68
UCHL1-208	ENST00000510566	MED23	Q9ULK4	1368 aa		10.78	□□□□□ -0.68
UCHL1-208	ENST00000510566	CSF1R	P07333	972 aa		10.78	□□□□□ -0.68
UCHL1-208	ENST00000510566	CXCL9	Q07325	125 aa		10.78	□□□□□ -0.68
UCHL1-208	ENST00000510566	LDHAL6A	Q6ZMR3	332 aa		10.78	□□□□□ -0.68
UCHL1-208	ENST00000510566	DPF2	Q92785	391 aa		10.78	□□□□□ -0.68
UCHL1-208	ENST00000510566	CDCA7L	Q96GN5	454 aa		10.78	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms