RNA–Protein interactions for RNA: ENST00000509994.2

SCARB2-204, Transcript of scavenger receptor class B member 2, humanhuman

TSL 4

Gene SCARB2, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-204ENST00000509994 AGBL3Q8NEM8 1001 aa12.89□□□□□ -0.35
SCARB2-204ENST00000509994 LINS1Q8NG48 757 aa12.89□□□□□ -0.35
SCARB2-204ENST00000509994 MED23Q9ULK4 1368 aa12.89□□□□□ -0.35
SCARB2-204ENST00000509994 ANKRD18BA2A2Z9 1011 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 VAMP4O75379 141 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 USP17L8P0C7I0 530 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 MAP2K2P36507 400 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
SCARB2-204ENST00000509994 ANGEL2Q5VTE6 544 aaKnown RBP12.88□□□□□ -0.35
SCARB2-204ENST00000509994 SLC4A10Q6U841 1118 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 PODNQ7Z5L7 613 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 OGFOD1Q8N543 542 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 ANKRD2Q9GZV1 360 aa12.88□□□□□ -0.35
SCARB2-204ENST00000509994 GBA2Q9HCG7 927 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-204ENST00000509994 ASTN2O75129 1339 aaPredicted RBP12.88□□□□□ -0.35
SCARB2-204ENST00000509994 IFIT5Q13325 482 aaKnown RBP12.87□□□□□ -0.35
SCARB2-204ENST00000509994 MAPK8IP2Q13387 824 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-204ENST00000509994 SCARF1Q14162 830 aa12.87□□□□□ -0.35
SCARB2-204ENST00000509994 MYOZ2Q9NPC6 264 aa12.87□□□□□ -0.35
SCARB2-204ENST00000509994 C9orf78Q9NZ63 289 aaPredicted RBP12.87□□□□□ -0.35
SCARB2-204ENST00000509994 ZNF804BA4D1E1 1349 aa12.87□□□□□ -0.35
SCARB2-204ENST00000509994 AKAP11Q9UKA4 1901 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 WTIPA6NIX2 430 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-204ENST00000509994 ZNF157P51786 506 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-204ENST00000509994 NOGQ13253 232 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 TTLL12Q14166 644 aaPredicted RBP12.86□□□□□ -0.35
SCARB2-204ENST00000509994 CDCA5Q96FF9 252 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 HHIPL1Q96JK4 782 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 COA1Q9GZY4 146 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 LEMD3Q9Y2U8 911 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 CASP8AP2Q9UKL3 1982 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 A0A1B0GUL6 1792 aa12.86□□□□□ -0.35
SCARB2-204ENST00000509994 PLIN1O60240 522 aa12.85□□□□□ -0.35
SCARB2-204ENST00000509994 BRPF1P55201 1214 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-204ENST00000509994 ZNF280AP59817 542 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-204ENST00000509994 CHRNDQ07001 517 aa12.85□□□□□ -0.35
SCARB2-204ENST00000509994 RGMBQ6NW40 437 aa12.85□□□□□ -0.35
SCARB2-204ENST00000509994 MXD3Q9BW11 206 aa12.85□□□□□ -0.35
SCARB2-204ENST00000509994 PLA2G12BQ9BX93 195 aa12.85□□□□□ -0.35
SCARB2-204ENST00000509994 SPINK5Q9NQ38 1064 aaPredicted RBP12.85□□□□□ -0.35
SCARB2-204ENST00000509994 HDAC9Q9UKV0 1011 aa12.85□□□□□ -0.35
SCARB2-204ENST00000509994 SCAF8Q9UPN6 1271 aaKnown RBP12.85□□□□□ -0.35
SCARB2-204ENST00000509994 MYO3BQ8WXR4 1341 aa12.85□□□□□ -0.35
SCARB2-204ENST00000509994 CA12O43570 354 aa12.84□□□□□ -0.35
SCARB2-204ENST00000509994 KLRK1P26718 216 aa12.84□□□□□ -0.35
SCARB2-204ENST00000509994 CCDC57Q2TAC2 916 aa12.84□□□□□ -0.35
SCARB2-204ENST00000509994 TTLL5Q6EMB2 1281 aa12.84□□□□□ -0.35
SCARB2-204ENST00000509994 HELBQ8NG08 1087 aaPredicted RBP12.84□□□□□ -0.35
SCARB2-204ENST00000509994 CNNM1Q9NRU3 951 aa12.84□□□□□ -0.35
SCARB2-204ENST00000509994 ZNF609O15014 1411 aa12.84□□□□□ -0.35
SCARB2-204ENST00000509994 ZNF646O15015 1829 aaPredicted RBP12.83□□□□□ -0.35
SCARB2-204ENST00000509994 GRM8O00222 908 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 TAF5LO75529 589 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 SASH1O94885 1247 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 NF2P35240 595 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 CASP7P55210 303 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 GTF2IP78347 998 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 DACT2Q5SW24 774 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 BEND3Q5T5X7 828 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 STRIP1Q5VSL9 837 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 LMBR1LQ6UX01 489 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 ZNF804AQ7Z570 1209 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 TXNRD3Q86VQ6 643 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 KIAA0825Q8IV33 1275 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 CCDC102AQ96A19 550 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 SRCIN1Q9C0H9 1055 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 PAPPA2Q9BXP8 1791 aa12.83□□□□□ -0.36
SCARB2-204ENST00000509994 CSF1RP07333 972 aa12.82□□□□□ -0.36
SCARB2-204ENST00000509994 NBPF9Q3BBW0 867 aa12.82□□□□□ -0.36
SCARB2-204ENST00000509994 GMLQ99445 158 aa12.82□□□□□ -0.36
SCARB2-204ENST00000509994 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.82□□□□□ -0.36
SCARB2-204ENST00000509994 PITPNM2Q9BZ72 1349 aa12.82□□□□□ -0.36
SCARB2-204ENST00000509994 F8W031 263 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-204ENST00000509994 FOXO4P98177 505 aa12.81□□□□□ -0.36
SCARB2-204ENST00000509994 PRAMEF18Q5VWM3 479 aa12.81□□□□□ -0.36
SCARB2-204ENST00000509994 LDHAL6AQ6ZMR3 332 aa12.81□□□□□ -0.36
SCARB2-204ENST00000509994 ABHD8Q96I13 439 aa12.81□□□□□ -0.36
SCARB2-204ENST00000509994 ZNF594Q96JF6 807 aaPredicted RBP12.81□□□□□ -0.36
SCARB2-204ENST00000509994 ZIC5Q96T25 663 aa12.81□□□□□ -0.36
SCARB2-204ENST00000509994 ECM29Q5VYK3 1845 aa12.81□□□□□ -0.36
SCARB2-204ENST00000509994 CCDC85CA6NKD9 419 aa12.8□□□□□ -0.36
SCARB2-204ENST00000509994 SNAP23O00161 211 aa12.8□□□□□ -0.36
SCARB2-204ENST00000509994 ALDH1L1O75891 902 aa12.8□□□□□ -0.36
SCARB2-204ENST00000509994 KIF23Q02241 960 aaPredicted RBP12.8□□□□□ -0.36
SCARB2-204ENST00000509994 JAG2Q9Y219 1238 aa12.8□□□□□ -0.36
SCARB2-204ENST00000509994 WNT10BO00744 389 aa12.79□□□□□ -0.36
SCARB2-204ENST00000509994 SLC10A3P09131 477 aa12.79□□□□□ -0.36
SCARB2-204ENST00000509994 RBM5P52756 815 aaKnown RBP eCLIP12.79□□□□□ -0.36
SCARB2-204ENST00000509994 PRKG1Q13976 671 aa12.79□□□□□ -0.36
SCARB2-204ENST00000509994 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
SCARB2-204ENST00000509994 EPHA10Q5JZY3 1008 aa12.79□□□□□ -0.36
SCARB2-204ENST00000509994 APOBEC3FQ8IUX4 373 aaKnown RBP12.79□□□□□ -0.36
SCARB2-204ENST00000509994 CD209Q9NNX6 404 aa12.79□□□□□ -0.36
SCARB2-204ENST00000509994 FAM155AB1AL88 458 aaPredicted RBP12.78□□□□□ -0.36
SCARB2-204ENST00000509994 UBE2Q2LH0YL09 131 aa12.78□□□□□ -0.36
SCARB2-204ENST00000509994 TRPA1O75762 1119 aa12.78□□□□□ -0.36
SCARB2-204ENST00000509994 FKBP1BP68106 108 aa12.78□□□□□ -0.36
SCARB2-204ENST00000509994 MKRN3Q13064 507 aaKnown RBP12.78□□□□□ -0.36
SCARB2-204ENST00000509994 DGKZQ13574 1117 aa12.78□□□□□ -0.36
SCARB2-204ENST00000509994 MOB2Q70IA6 237 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms