RNA–Protein interactions for RNA: ENST00000509490.5

PDGFRA-208, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best)

Gene PDGFRA, Length 2,991 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-208ENST00000509490 OSBPL5Q9H0X9 879 aaPredicted RBP10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 C19orf44Q9H6X5 657 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 ANO10Q9NW15 660 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 PAG1Q9NWQ8 432 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 IMPACTQ9P2X3 320 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 PTPDC1A2A3K4 754 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 CYP27B1O15528 508 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 TUBB4AP04350 444 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 NKX1-1Q15270 411 aaPredicted RBP10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 LRRFIP1Q32MZ4 808 aaKnown RBP10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 NYAP1Q6ZVC0 841 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 TFIP11Q9UBB9 837 aaKnown RBP10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 USP16Q9Y5T5 823 aa10.83□□□□□ -0.68
PDGFRA-208ENST00000509490 H3BQV1 296 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 YEATS4O95619 227 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 ZFYP08048 801 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 CAMK4Q16566 473 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 IFFO2Q5TF58 517 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 ILDR1Q86SU0 546 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 PDCL2Q8N4E4 241 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 CCDC191Q8NCU4 936 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 BICD2Q8TD16 824 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 DDX54Q8TDD1 881 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 EDC3Q96F86 508 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 PLA2G12BQ9BX93 195 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 E7EWF7 191 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 RNF113AO15541 343 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 PDIA3P30101 505 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 TRIM28Q13263 835 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 SLC39A6Q13433 755 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 ADALQ6DHV7 355 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 UBE3BQ7Z3V4 1068 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 LRRC8AQ8IWT6 810 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 DHX40Q8IX18 779 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 CKAP2LQ8IYA6 745 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 FMR1NBQ8N0W7 255 aaPredicted RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 CNKSR2Q8WXI2 1034 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 PKNOX2Q96KN3 472 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 TCEANC2Q96MN5 208 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 GTPBP4Q9BZE4 634 aaKnown RBP10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 DNAJC25Q9H1X3 360 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 POLR3EQ9NVU0 708 aa10.82□□□□□ -0.68
PDGFRA-208ENST00000509490 NEDD4P46934 1319 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 A0A087WZG4 1122 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 FAM237AA0A1B0GTK4 181 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 KIF2AO00139 706 aaPredicted RBP10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 EYA2O00167 538 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 HSPD1P10809 573 aaKnown RBP10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 DMTNQ08495 405 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 TTC5Q8N0Z6 440 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 CACTINQ8WUQ7 758 aaKnown RBP10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 TRIM5Q9C035 493 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 ARAP2Q8WZ64 1704 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 MAST3O60307 1309 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 GSDMDP57764 484 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 CCAR1Q8IX12 1150 aaKnown RBP10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 ZNF512BQ96KM6 892 aaPredicted RBP10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 GOLPH3LQ9H4A5 285 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 CLIP2Q9UDT6 1046 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 CTNNA3Q9UI47 895 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 LRP5O75197 1615 aa10.81□□□□□ -0.68
PDGFRA-208ENST00000509490 ERVV-2B6SEH9 535 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 MYL6BP14649 208 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 CCDC73Q6ZRK6 1079 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 BRAPQ7Z569 592 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 ELOA2Q8IYF1 753 aaPredicted RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 SPC24Q8NBT2 197 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 USP28Q96RU2 1077 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 CWC25Q9NXE8 425 aaPredicted RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 MAP3K15Q6ZN16 1313 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 MYO1BO43795 1136 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 ZSCAN20P17040 1043 aaPredicted RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 CCDC144BQ3MJ40 725 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 SLFNL1Q499Z3 407 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 LMBR1LQ6UX01 489 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 TIGD1Q96MW7 591 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 SEC62Q99442 399 aaKnown RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 NAT10Q9H0A0 1025 aaKnown RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 NBPF26B4DH59 902 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 FDPSP14324 419 aaKnown RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 NCBP1Q09161 790 aaKnown RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 STK3Q13188 491 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 NBPF14Q5TI25 921 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 NBPF10Q6P3W6 841 aaKnown RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 CCDC129Q6ZRS4 1044 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 C11orf57Q6ZUT1 292 aaPredicted RBP10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 NBPF15Q8N660 670 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 KCNG4Q8TDN1 519 aa10.8□□□□□ -0.68
PDGFRA-208ENST00000509490 GOLGA6L19H0YKK7 550 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 CCZ1BP86790 482 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 CCZ1P86791 482 aaPredicted RBP10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 MRPS27Q92552 414 aaKnown RBP10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 ISCA1Q9BUE6 129 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 FAM53CQ9NYF3 392 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 LRP6O75581 1613 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 NID2Q14112 1375 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 TIAM2Q8IVF5 1701 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 FOXP2O15409 715 aa10.79□□□□□ -0.68
PDGFRA-208ENST00000509490 KINO60870 393 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms