RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 FAM161AQ3B820 660 aa19.58■□□□□ 0.72
TPM3-219ENST00000509409 ANKRD2Q9GZV1 360 aa19.58■□□□□ 0.72
TPM3-219ENST00000509409 CHMP3Q9Y3E7 222 aa19.58■□□□□ 0.72
TPM3-219ENST00000509409 TRPM7Q96QT4 1865 aa19.58■□□□□ 0.72
TPM3-219ENST00000509409 ANKRD18BA2A2Z9 1011 aa19.57■□□□□ 0.72
TPM3-219ENST00000509409 CSF1RP07333 972 aa19.57■□□□□ 0.72
TPM3-219ENST00000509409 KCNJ4P48050 445 aa19.57■□□□□ 0.72
TPM3-219ENST00000509409 CASP7P55210 303 aa19.57■□□□□ 0.72
TPM3-219ENST00000509409 COA1Q9GZY4 146 aa19.57■□□□□ 0.72
TPM3-219ENST00000509409 MYOZ2Q9NPC6 264 aa19.57■□□□□ 0.72
TPM3-219ENST00000509409 MED23Q9ULK4 1368 aa19.57■□□□□ 0.72
TPM3-219ENST00000509409 ASTN2O75129 1339 aaPredicted RBP19.56■□□□□ 0.72
TPM3-219ENST00000509409 ANGEL2Q5VTE6 544 aaKnown RBP19.56■□□□□ 0.72
TPM3-219ENST00000509409 GMLQ99445 158 aa19.56■□□□□ 0.72
TPM3-219ENST00000509409 TSKSQ9UJT2 592 aa19.56■□□□□ 0.72
TPM3-219ENST00000509409 ZNF804BA4D1E1 1349 aa19.55■□□□□ 0.72
TPM3-219ENST00000509409 NOGQ13253 232 aa19.55■□□□□ 0.72
TPM3-219ENST00000509409 RGMBQ6NW40 437 aa19.55■□□□□ 0.72
TPM3-219ENST00000509409 MXD3Q9BW11 206 aa19.55■□□□□ 0.72
TPM3-219ENST00000509409 ZNF157P51786 506 aaPredicted RBP19.54■□□□□ 0.72
TPM3-219ENST00000509409 IFIT5Q13325 482 aaKnown RBP19.54■□□□□ 0.72
TPM3-219ENST00000509409 BEND3Q5T5X7 828 aa19.54■□□□□ 0.72
TPM3-219ENST00000509409 TXNRD3Q86VQ6 643 aa19.54■□□□□ 0.72
TPM3-219ENST00000509409 OGFOD1Q8N543 542 aa19.54■□□□□ 0.72
TPM3-219ENST00000509409 CA12O43570 354 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 BRPF1P55201 1214 aaPredicted RBP19.53■□□□□ 0.72
TPM3-219ENST00000509409 CHRNDQ07001 517 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 DACT2Q5SW24 774 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 STRIP1Q5VSL9 837 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 TTLL5Q6EMB2 1281 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 SLC4A10Q6U841 1118 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 CCDC102AQ96A19 550 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 CDCA5Q96FF9 252 aa19.53■□□□□ 0.72
TPM3-219ENST00000509409 FOXO4P98177 505 aa19.52■□□□□ 0.72
TPM3-219ENST00000509409 TAF7LQ5H9L4 462 aa19.52■□□□□ 0.72
TPM3-219ENST00000509409 C9orf78Q9NZ63 289 aaPredicted RBP19.52■□□□□ 0.72
TPM3-219ENST00000509409 TAF5LO75529 589 aa19.51■□□□□ 0.71
TPM3-219ENST00000509409 LMBR1LQ6UX01 489 aa19.51■□□□□ 0.71
TPM3-219ENST00000509409 HELBQ8NG08 1087 aaPredicted RBP19.51■□□□□ 0.71
TPM3-219ENST00000509409 ZIC5Q96T25 663 aa19.51■□□□□ 0.71
TPM3-219ENST00000509409 SCAF8Q9UPN6 1271 aaKnown RBP19.51■□□□□ 0.71
TPM3-219ENST00000509409 SCN9AQ15858 1988 aa19.51■□□□□ 0.71
TPM3-219ENST00000509409 MYO3BQ8WXR4 1341 aa19.51■□□□□ 0.71
TPM3-219ENST00000509409 KLRK1P26718 216 aa19.5■□□□□ 0.71
TPM3-219ENST00000509409 GTF2IP78347 998 aa19.5■□□□□ 0.71
TPM3-219ENST00000509409 CCDC57Q2TAC2 916 aa19.5■□□□□ 0.71
TPM3-219ENST00000509409 NBPF9Q3BBW0 867 aa19.5■□□□□ 0.71
TPM3-219ENST00000509409 SNAP23O00161 211 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 GRM8O00222 908 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 PLIN1O60240 522 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 SRCIN1Q9C0H9 1055 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 CD209Q9NNX6 404 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 HDAC9Q9UKV0 1011 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 ZNF609O15014 1411 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 PITPNM2Q9BZ72 1349 aa19.49■□□□□ 0.71
TPM3-219ENST00000509409 KIF23Q02241 960 aaPredicted RBP19.48■□□□□ 0.71
TPM3-219ENST00000509409 LDHAL6AQ6ZMR3 332 aa19.48■□□□□ 0.71
TPM3-219ENST00000509409 KIAA0825Q8IV33 1275 aa19.48■□□□□ 0.71
TPM3-219ENST00000509409 ABHD8Q96I13 439 aa19.48■□□□□ 0.71
TPM3-219ENST00000509409 ZNF594Q96JF6 807 aaPredicted RBP19.48■□□□□ 0.71
TPM3-219ENST00000509409 CNNM1Q9NRU3 951 aa19.48■□□□□ 0.71
TPM3-219ENST00000509409 FAM155AB1AL88 458 aaPredicted RBP19.47■□□□□ 0.71
TPM3-219ENST00000509409 ALDH1L1O75891 902 aa19.47■□□□□ 0.71
TPM3-219ENST00000509409 MMP14P50281 582 aa19.47■□□□□ 0.71
TPM3-219ENST00000509409 TTLL12Q14166 644 aaPredicted RBP19.47■□□□□ 0.71
TPM3-219ENST00000509409 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
TPM3-219ENST00000509409 PRAMEF18Q5VWM3 479 aa19.47■□□□□ 0.71
TPM3-219ENST00000509409 POLR2AP24928 1970 aaKnown RBP19.46■□□□□ 0.71
TPM3-219ENST00000509409 WNT10BO00744 389 aa19.46■□□□□ 0.71
TPM3-219ENST00000509409 MYH3P11055 1940 aa19.45■□□□□ 0.7
TPM3-219ENST00000509409 SASH1O94885 1247 aa19.45■□□□□ 0.7
TPM3-219ENST00000509409 FKBP1BP68106 108 aa19.45■□□□□ 0.7
TPM3-219ENST00000509409 ZNF804AQ7Z570 1209 aa19.45■□□□□ 0.7
TPM3-219ENST00000509409 THSD7BQ9C0I4 1608 aa19.44■□□□□ 0.7
TPM3-219ENST00000509409 UBE2Q2LH0YL09 131 aa19.44■□□□□ 0.7
TPM3-219ENST00000509409 SLC10A3P09131 477 aa19.44■□□□□ 0.7
TPM3-219ENST00000509409 NF2P35240 595 aa19.44■□□□□ 0.7
TPM3-219ENST00000509409 CCDC85CA6NKD9 419 aa19.43■□□□□ 0.7
TPM3-219ENST00000509409 TRPA1O75762 1119 aa19.43■□□□□ 0.7
TPM3-219ENST00000509409 C15orf52Q6ZUT6 534 aaKnown RBP19.43■□□□□ 0.7
TPM3-219ENST00000509409 MOB2Q70IA6 237 aa19.43■□□□□ 0.7
TPM3-219ENST00000509409 SUCLG2Q96I99 432 aa19.43■□□□□ 0.7
TPM3-219ENST00000509409 SPEF2Q9C093 1822 aa19.43■□□□□ 0.7
TPM3-219ENST00000509409 E9PSI1 815 aa19.42■□□□□ 0.7
TPM3-219ENST00000509409 F8W031 263 aaPredicted RBP19.42■□□□□ 0.7
TPM3-219ENST00000509409 DLGAP5Q15398 846 aa19.42■□□□□ 0.7
TPM3-219ENST00000509409 MRPL50Q8N5N7 158 aaKnown RBP19.42■□□□□ 0.7
TPM3-219ENST00000509409 CSRNP1Q96S65 589 aa19.42■□□□□ 0.7
TPM3-219ENST00000509409 RNF186Q9NXI6 227 aa19.42■□□□□ 0.7
TPM3-219ENST00000509409 CACNA1FO60840 1977 aa19.42■□□□□ 0.7
TPM3-219ENST00000509409 ZNF521Q96K83 1311 aa19.42■□□□□ 0.7
TPM3-219ENST00000509409 RASAL3Q86YV0 1011 aa19.41■□□□□ 0.7
TPM3-219ENST00000509409 APOBEC3FQ8IUX4 373 aaKnown RBP19.41■□□□□ 0.7
TPM3-219ENST00000509409 JAG2Q9Y219 1238 aa19.41■□□□□ 0.7
TPM3-219ENST00000509409 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
TPM3-219ENST00000509409 IL1R1P14778 569 aa19.4■□□□□ 0.7
TPM3-219ENST00000509409 DGKZQ13574 1117 aa19.4■□□□□ 0.7
TPM3-219ENST00000509409 PRKG1Q13976 671 aa19.4■□□□□ 0.7
TPM3-219ENST00000509409 REM2Q8IYK8 340 aaPredicted RBP19.4■□□□□ 0.7
TPM3-219ENST00000509409 SAGE1Q9NXZ1 904 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms