RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 SMC4Q9NTJ3 1288 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 SCN9AQ15858 1988 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 ZNF541Q9H0D2 1346 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 RTL9Q8NET4 1388 aa9.2□□□□□ -0.94
TOPBP1-207ENST00000509162 ADAMTSL1Q8N6G6 1762 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 FOXO4P98177 505 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 GRAPQ13588 217 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 CCDC93Q567U6 631 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 ANKRD44Q8N8A2 993 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 GRAPLQ8TC17 118 aaPredicted RBP9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 SUCLG2Q96I99 432 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 PLA2G12BQ9BX93 195 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 GREM2Q9H772 168 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 ZNF277Q9NRM2 450 aaPredicted RBP9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 RNF181Q9P0P0 153 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 PDZRN3Q9UPQ7 1066 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 PCDHGA4Q9Y5G9 962 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 UTYO14607 1347 aa9.19□□□□□ -0.94
TOPBP1-207ENST00000509162 PTPRCP08575 1304 aa9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 NBPF7P0C2Y1 421 aaPredicted RBP9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 GTF2E1P29083 439 aaPredicted RBP9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 FKBP4Q02790 459 aaKnown RBP eCLIP9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 CEP350Q5VT06 3117 aa9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 TTLL11Q8NHH1 800 aa9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 RPGRQ92834 1020 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 KHSRPQ92945 711 aaKnown RBP eCLIP9.18□□□□□ -0.942e-8■□□□□ 11.3
TOPBP1-207ENST00000509162 NLRP3Q96P20 1036 aa9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 LARP6Q9BRS8 491 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 TAOK3Q9H2K8 898 aa9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 NOB1Q9ULX3 412 aaKnown RBP9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 ATP6V0A2Q9Y487 856 aa9.18□□□□□ -0.94
TOPBP1-207ENST00000509162 IRS2Q9Y4H2 1338 aa9.17□□□□□ -0.94
TOPBP1-207ENST00000509162 GRM8O00222 908 aa9.17□□□□□ -0.94
TOPBP1-207ENST00000509162 PDE8AO60658 829 aa9.17□□□□□ -0.94
TOPBP1-207ENST00000509162 CT47B1P0C2W7 299 aaPredicted RBP9.17□□□□□ -0.94
TOPBP1-207ENST00000509162 RLBP1P12271 317 aa9.17□□□□□ -0.94
TOPBP1-207ENST00000509162 TRIM27P14373 513 aa9.17□□□□□ -0.94
TOPBP1-207ENST00000509162 PSME4Q14997 1843 aa9.17□□□□□ -0.94
TOPBP1-207ENST00000509162 POTECB2RU33 542 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 CSF1RP07333 972 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 LMNB1P20700 586 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 KLRK1P26718 216 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 GPSM2P81274 684 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 SMYD5Q6GMV2 418 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 SLC4A10Q6U841 1118 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 ZNF526Q8TF50 670 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 RBM17Q96I25 401 aaKnown RBP9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 PSMD1Q99460 953 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 RTFDC1Q9BY42 306 aaPredicted RBP9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 NMRK2Q9NPI5 230 aa9.16□□□□□ -0.94
TOPBP1-207ENST00000509162 YDJCA8MPS7 323 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 ALDH1L1O75891 902 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 NUDT7P0C024 238 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 NEXNQ0ZGT2 675 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 PLPP6Q8IY26 295 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 PTCD2Q8WV60 388 aaKnown RBP9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 MEIS3Q99687 375 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 SRCIN1Q9C0H9 1055 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 USP44Q9H0E7 712 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 POLLQ9UGP5 575 aa9.15□□□□□ -0.94
TOPBP1-207ENST00000509162 SNAP23O00161 211 aa9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 ALDH1B1P30837 517 aa9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 IARSP41252 1262 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 RFX5P48382 616 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 AOC3Q16853 763 aa9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 RABL6Q3YEC7 729 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 DDX46Q7L014 1031 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 DDX27Q96GQ7 796 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 ZNF594Q96JF6 807 aaPredicted RBP9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 CHMP4AQ9BY43 222 aa9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 BICC1Q9H694 974 aaKnown RBP9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 ARAP2Q8WZ64 1704 aa9.14□□□□□ -0.95
TOPBP1-207ENST00000509162 KIF16BQ96L93 1317 aa9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 ZC3H4Q9UPT8 1303 aaKnown RBP9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 ITGA6P23229 1130 aa9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 DSG2Q14126 1118 aa9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 CCDC152Q4G0S7 254 aa9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 LMBR1LQ6UX01 489 aa9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 SP8Q8IXZ3 490 aa9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 COL1A1P02452 1464 aaPredicted RBP9.13□□□□□ -0.95
TOPBP1-207ENST00000509162 SHTN1A0MZ66 631 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 FZD9O00144 591 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 SOGA3Q5TF21 947 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 INTS3Q68E01 1043 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 ATF7IPQ6VMQ6 1270 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 TXNRD3Q86VQ6 643 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 TMEM57Q8N5G2 664 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 KLHDC4Q8TBB5 520 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 TBC1D16Q8TBP0 767 aa9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 PUS3Q9BZE2 481 aaKnown RBP9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.12□□□□□ -0.95
TOPBP1-207ENST00000509162 BBOX1O75936 387 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 DDNO94850 711 aaPredicted RBP9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 RPS8P62241 208 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 KIAA2012Q0VF49 1180 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 C20orf194Q5TEA3 1177 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 RTKN2Q8IZC4 609 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 CLUAP1Q96AJ1 413 aa9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 API5Q9BZZ5 524 aaKnown RBP9.11□□□□□ -0.95
TOPBP1-207ENST00000509162 KCNQ5Q9NR82 932 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 181.2 ms