RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 TBC1D8O95759 1140 aa20.64■□□□□ 0.89
CXCL1-202ENST00000509101 DDX58O95786 925 aaKnown RBP20.64■□□□□ 0.89
CXCL1-202ENST00000509101 GNAI1P63096 354 aa20.64■□□□□ 0.89
CXCL1-202ENST00000509101 ZNF296Q8WUU4 475 aaPredicted RBP20.64■□□□□ 0.89
CXCL1-202ENST00000509101 ECM29Q5VYK3 1845 aa20.63■□□□□ 0.89
CXCL1-202ENST00000509101 MKRN3Q13064 507 aaKnown RBP20.63■□□□□ 0.89
CXCL1-202ENST00000509101 C8orf58Q8NAV2 365 aa20.63■□□□□ 0.89
CXCL1-202ENST00000509101 MAP3K2Q9Y2U5 619 aa20.63■□□□□ 0.89
CXCL1-202ENST00000509101 SASH1O94885 1247 aa20.62■□□□□ 0.89
CXCL1-202ENST00000509101 DACT2Q5SW24 774 aa20.62■□□□□ 0.89
CXCL1-202ENST00000509101 GREM2Q9H772 168 aa20.62■□□□□ 0.89
CXCL1-202ENST00000509101 MINPP1Q9UNW1 487 aa20.62■□□□□ 0.89
CXCL1-202ENST00000509101 APAF1O14727 1248 aa20.61■□□□□ 0.89
CXCL1-202ENST00000509101 NF2P35240 595 aa20.61■□□□□ 0.89
CXCL1-202ENST00000509101 CALD1Q05682 793 aaKnown RBP20.61■□□□□ 0.89
CXCL1-202ENST00000509101 PRPF38BQ5VTL8 546 aaKnown RBP20.61■□□□□ 0.89
CXCL1-202ENST00000509101 OGFOD1Q8N543 542 aa20.61■□□□□ 0.89
CXCL1-202ENST00000509101 A0A1B0GUL6 1792 aa20.61■□□□□ 0.89
CXCL1-202ENST00000509101 MYO3BQ8WXR4 1341 aa20.6■□□□□ 0.89
CXCL1-202ENST00000509101 WNT10BO00744 389 aa20.6■□□□□ 0.89
CXCL1-202ENST00000509101 IGKV5-2P06315 115 aa20.6■□□□□ 0.89
CXCL1-202ENST00000509101 CCT4P50991 539 aaKnown RBP20.6■□□□□ 0.89
CXCL1-202ENST00000509101 PKN2Q16513 984 aaKnown RBP20.6■□□□□ 0.89
CXCL1-202ENST00000509101 CCDC30Q5VVM6 783 aa20.6■□□□□ 0.89
CXCL1-202ENST00000509101 TTLL11Q8NHH1 800 aa20.6■□□□□ 0.89
CXCL1-202ENST00000509101 BSDC1Q9NW68 430 aaPredicted RBP20.6■□□□□ 0.89
CXCL1-202ENST00000509101 LAMB1P07942 1786 aa20.59■□□□□ 0.89
CXCL1-202ENST00000509101 PI4KAP2A4QPH2 592 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 GPR25O00155 361 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 TM4SF4P48230 202 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 PRKG1Q13976 671 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 STRIP1Q5VSL9 837 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 TXNRD3Q86VQ6 643 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 PI4KAP1Q8N8J0 262 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 COA1Q9GZY4 146 aa20.58■□□□□ 0.89
CXCL1-202ENST00000509101 SREBF2Q12772 1141 aa20.57■□□□□ 0.88
CXCL1-202ENST00000509101 CWF19L2Q2TBE0 894 aaKnown RBP20.57■□□□□ 0.88
CXCL1-202ENST00000509101 KSR2Q6VAB6 950 aa20.57■□□□□ 0.88
CXCL1-202ENST00000509101 TSPYL6Q8N831 410 aa20.57■□□□□ 0.88
CXCL1-202ENST00000509101 KLRK1P26718 216 aa20.56■□□□□ 0.88
CXCL1-202ENST00000509101 PTPN12Q05209 780 aaKnown RBP20.56■□□□□ 0.88
CXCL1-202ENST00000509101 NEXNQ0ZGT2 675 aa20.56■□□□□ 0.88
CXCL1-202ENST00000509101 KIAA0825Q8IV33 1275 aa20.56■□□□□ 0.88
CXCL1-202ENST00000509101 IGHMBP2P38935 993 aaKnown RBP20.55■□□□□ 0.88
CXCL1-202ENST00000509101 FBXO46Q6PJ61 603 aaPredicted RBP20.55■□□□□ 0.88
CXCL1-202ENST00000509101 ARMC9Q7Z3E5 817 aa20.55■□□□□ 0.88
CXCL1-202ENST00000509101 UBE3BQ7Z3V4 1068 aa20.55■□□□□ 0.88
CXCL1-202ENST00000509101 APOBEC3FQ8IUX4 373 aaKnown RBP20.55■□□□□ 0.88
CXCL1-202ENST00000509101 CHMP4AQ9BY43 222 aa20.55■□□□□ 0.88
CXCL1-202ENST00000509101 NEURL1BA8MQ27 555 aa20.54■□□□□ 0.88
CXCL1-202ENST00000509101 NOM1Q5C9Z4 860 aaKnown RBP20.54■□□□□ 0.88
CXCL1-202ENST00000509101 TTLL5Q6EMB2 1281 aa20.54■□□□□ 0.88
CXCL1-202ENST00000509101 R3HDMLQ9H3Y0 253 aa20.54■□□□□ 0.88
CXCL1-202ENST00000509101 LEMD3Q9Y2U8 911 aa20.54■□□□□ 0.88
CXCL1-202ENST00000509101 COL1A1P02452 1464 aaPredicted RBP20.54■□□□□ 0.88
CXCL1-202ENST00000509101 ZNF804BA4D1E1 1349 aa20.53■□□□□ 0.88
CXCL1-202ENST00000509101 FKTNO75072 461 aa20.53■□□□□ 0.88
CXCL1-202ENST00000509101 TSR2Q969E8 191 aaKnown RBP20.53■□□□□ 0.88
CXCL1-202ENST00000509101 STK31Q9BXU1 1019 aa20.53■□□□□ 0.88
CXCL1-202ENST00000509101 ANGEL1Q9UNK9 670 aaKnown RBP20.53■□□□□ 0.88
CXCL1-202ENST00000509101 FZD1Q9UP38 647 aa20.53■□□□□ 0.88
CXCL1-202ENST00000509101 HTTP42858 3142 aa20.53■□□□□ 0.88
CXCL1-202ENST00000509101 SSC5DA1L4H1 1573 aa20.52■□□□□ 0.88
CXCL1-202ENST00000509101 GTF2IP78347 998 aa20.52■□□□□ 0.88
CXCL1-202ENST00000509101 SPRYD7Q5W111 196 aa20.52■□□□□ 0.88
CXCL1-202ENST00000509101 CFHR5Q9BXR6 569 aa20.52■□□□□ 0.88
CXCL1-202ENST00000509101 PRKRIP1Q9H875 184 aaPredicted RBP20.52■□□□□ 0.88
CXCL1-202ENST00000509101 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.52■□□□□ 0.88
CXCL1-202ENST00000509101 OTOFQ9HC10 1997 aa20.52■□□□□ 0.87
CXCL1-202ENST00000509101 ITGA6P23229 1130 aa20.51■□□□□ 0.87
CXCL1-202ENST00000509101 MMP14P50281 582 aa20.51■□□□□ 0.87
CXCL1-202ENST00000509101 G2E3Q7L622 706 aa20.51■□□□□ 0.87
CXCL1-202ENST00000509101 ZBED3Q96IU2 234 aaPredicted RBP20.51■□□□□ 0.87
CXCL1-202ENST00000509101 ANKRD2Q9GZV1 360 aa20.51■□□□□ 0.87
CXCL1-202ENST00000509101 CACNA1FO60840 1977 aa20.51■□□□□ 0.87
CXCL1-202ENST00000509101 RBBP6Q7Z6E9 1792 aaKnown RBP20.5■□□□□ 0.87
CXCL1-202ENST00000509101 H7C1W4 665 aa20.5■□□□□ 0.87
CXCL1-202ENST00000509101 KCNJ4P48050 445 aa20.5■□□□□ 0.87
CXCL1-202ENST00000509101 LDLRAD1Q5T700 205 aa20.5■□□□□ 0.87
CXCL1-202ENST00000509101 MPHOSPH8Q99549 860 aa20.5■□□□□ 0.87
CXCL1-202ENST00000509101 CHRNDQ07001 517 aa20.48■□□□□ 0.87
CXCL1-202ENST00000509101 PLA2G12BQ9BX93 195 aa20.48■□□□□ 0.87
CXCL1-202ENST00000509101 DEFB129Q9H1M3 183 aa20.48■□□□□ 0.87
CXCL1-202ENST00000509101 ALDH1A1P00352 501 aa20.47■□□□□ 0.87
CXCL1-202ENST00000509101 GCKRQ14397 625 aa20.47■□□□□ 0.87
CXCL1-202ENST00000509101 DLGAP5Q15398 846 aa20.47■□□□□ 0.87
CXCL1-202ENST00000509101 CLMNQ96JQ2 1002 aa20.47■□□□□ 0.87
CXCL1-202ENST00000509101 CD209Q9NNX6 404 aa20.47■□□□□ 0.87
CXCL1-202ENST00000509101 PCDHAC2Q9Y5I4 1007 aa20.47■□□□□ 0.87
CXCL1-202ENST00000509101 CENPFP49454 3210 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 MANSC4A6NHS7 340 aaPredicted RBP20.46■□□□□ 0.87
CXCL1-202ENST00000509101 SNAP23O00161 211 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 CASP7P55210 303 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 TWISTNBQ3B726 338 aaPredicted RBP20.46■□□□□ 0.87
CXCL1-202ENST00000509101 CERS5Q8N5B7 392 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 SLC10A4Q96EP9 437 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 WNK4Q96J92 1243 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 TRIM17Q9Y577 477 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 ARAP2Q8WZ64 1704 aa20.46■□□□□ 0.87
CXCL1-202ENST00000509101 SLC4A2P04920 1241 aa20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms