RNA–Protein interactions for RNA: ENST00000509085.5

HMGCR-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best)

Gene HMGCR, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-207ENST00000509085 HDAC9Q9UKV0 1011 aa11.28□□□□□ -0.6
HMGCR-207ENST00000509085 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
HMGCR-207ENST00000509085 COL1A1P02452 1464 aaPredicted RBP11.27□□□□□ -0.6
HMGCR-207ENST00000509085 SOX10P56693 466 aa11.27□□□□□ -0.61
HMGCR-207ENST00000509085 NEXNQ0ZGT2 675 aa11.27□□□□□ -0.61
HMGCR-207ENST00000509085 SREBF2Q12772 1141 aa11.27□□□□□ -0.61
HMGCR-207ENST00000509085 STRIP1Q5VSL9 837 aa11.27□□□□□ -0.61
HMGCR-207ENST00000509085 PRPF38BQ5VTL8 546 aaKnown RBP11.27□□□□□ -0.61
HMGCR-207ENST00000509085 COA1Q9GZY4 146 aa11.27□□□□□ -0.61
HMGCR-207ENST00000509085 SPEF2Q9C093 1822 aa11.27□□□□□ -0.61
HMGCR-207ENST00000509085 TM4SF4P48230 202 aa11.26□□□□□ -0.61
HMGCR-207ENST00000509085 TTLL12Q14166 644 aaPredicted RBP11.26□□□□□ -0.61
HMGCR-207ENST00000509085 DACT2Q5SW24 774 aa11.26□□□□□ -0.61
HMGCR-207ENST00000509085 KSR2Q6VAB6 950 aa11.26□□□□□ -0.61
HMGCR-207ENST00000509085 APOBEC3FQ8IUX4 373 aaKnown RBP11.26□□□□□ -0.61
HMGCR-207ENST00000509085 CFHR5Q9BXR6 569 aa11.26□□□□□ -0.61
HMGCR-207ENST00000509085 HPS5Q9UPZ3 1129 aa11.26□□□□□ -0.61
HMGCR-207ENST00000509085 LEMD3Q9Y2U8 911 aa11.26□□□□□ -0.61
HMGCR-207ENST00000509085 CCT4P50991 539 aaKnown RBP11.25□□□□□ -0.61
HMGCR-207ENST00000509085 ARMC9Q7Z3E5 817 aa11.25□□□□□ -0.61
HMGCR-207ENST00000509085 TTLL11Q8NHH1 800 aa11.25□□□□□ -0.61
HMGCR-207ENST00000509085 ZNF296Q8WUU4 475 aaPredicted RBP11.25□□□□□ -0.61
HMGCR-207ENST00000509085 CCDC85AQ96PX6 553 aaPredicted RBP11.25□□□□□ -0.61
HMGCR-207ENST00000509085 RNF216Q9NWF9 866 aaPredicted RBP11.25□□□□□ -0.61
HMGCR-207ENST00000509085 MINPP1Q9UNW1 487 aa11.25□□□□□ -0.61
HMGCR-207ENST00000509085 MAP3K2Q9Y2U5 619 aa11.25□□□□□ -0.61
HMGCR-207ENST00000509085 UBE2Q2LH0YL09 131 aa11.24□□□□□ -0.61
HMGCR-207ENST00000509085 ELL2O00472 640 aaPredicted RBP11.24□□□□□ -0.61
HMGCR-207ENST00000509085 WNT10BO00744 389 aa11.24□□□□□ -0.61
HMGCR-207ENST00000509085 APAF1O14727 1248 aa11.24□□□□□ -0.61
HMGCR-207ENST00000509085 ALDH1A1P00352 501 aa11.24□□□□□ -0.61
HMGCR-207ENST00000509085 IGHMBP2P38935 993 aaKnown RBP11.24□□□□□ -0.61
HMGCR-207ENST00000509085 DDX10Q13206 875 aaKnown RBP11.24□□□□□ -0.61
HMGCR-207ENST00000509085 NBPF9Q3BBW0 867 aa11.24□□□□□ -0.61
HMGCR-207ENST00000509085 FBXO46Q6PJ61 603 aaPredicted RBP11.24□□□□□ -0.61
HMGCR-207ENST00000509085 STK31Q9BXU1 1019 aa11.24□□□□□ -0.61
HMGCR-207ENST00000509085 ANKRD2Q9GZV1 360 aa11.24□□□□□ -0.61
HMGCR-207ENST00000509085 LAMB1P07942 1786 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 PI4KAP2A4QPH2 592 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 GPR25O00155 361 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 TBC1D8O95759 1140 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 IGKV5-2P06315 115 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 MOB2Q70IA6 237 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 PI4KAP1Q8N8J0 262 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 C8orf58Q8NAV2 365 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 FBXW7Q969H0 707 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 GREM2Q9H772 168 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 PPP2R3BQ9Y5P8 575 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 ECM29Q5VYK3 1845 aa11.23□□□□□ -0.61
HMGCR-207ENST00000509085 ZNF804BA4D1E1 1349 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 UNCXA6NJT0 531 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 NEURL1BA8MQ27 555 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 CACNA1FO60840 1977 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 FKTNO75072 461 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 INHBEP58166 350 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 TTLL5Q6EMB2 1281 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-207ENST00000509085 PLA2G12BQ9BX93 195 aa11.22□□□□□ -0.61
HMGCR-207ENST00000509085 PRKRIP1Q9H875 184 aaPredicted RBP11.22□□□□□ -0.61
HMGCR-207ENST00000509085 MANSC4A6NHS7 340 aaPredicted RBP11.21□□□□□ -0.61
HMGCR-207ENST00000509085 H7C1W4 665 aa11.21□□□□□ -0.61
HMGCR-207ENST00000509085 SASH1O94885 1247 aa11.21□□□□□ -0.61
HMGCR-207ENST00000509085 ZBTB48P10074 688 aaPredicted RBP11.21□□□□□ -0.61
HMGCR-207ENST00000509085 LDLRAD1Q5T700 205 aa11.21□□□□□ -0.61
HMGCR-207ENST00000509085 MPHOSPH8Q99549 860 aa11.21□□□□□ -0.61
HMGCR-207ENST00000509085 MYH16Q9H6N6 1097 aa11.21□□□□□ -0.61
HMGCR-207ENST00000509085 ITGA6P23229 1130 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 KCNJ4P48050 445 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 MAP3K11Q16584 847 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 PRAMEF18Q5VWM3 479 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 SPRYD7Q5W111 196 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 UBE3BQ7Z3V4 1068 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 KIAA0825Q8IV33 1275 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 MTMR14Q8NCE2 650 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 GCC1Q96CN9 775 aa11.2□□□□□ -0.62
HMGCR-207ENST00000509085 ZBED3Q96IU2 234 aaPredicted RBP11.2□□□□□ -0.62
HMGCR-207ENST00000509085 SCAF8Q9UPN6 1271 aaKnown RBP11.2□□□□□ -0.62
HMGCR-207ENST00000509085 MYO1BO43795 1136 aa11.19□□□□□ -0.62
HMGCR-207ENST00000509085 PPP1R12BO60237 982 aaPredicted RBP11.19□□□□□ -0.62
HMGCR-207ENST00000509085 CSF1RP07333 972 aa11.19□□□□□ -0.62
HMGCR-207ENST00000509085 PTPN12Q05209 780 aaKnown RBP11.19□□□□□ -0.62
HMGCR-207ENST00000509085 DLGAP5Q15398 846 aa11.19□□□□□ -0.62
HMGCR-207ENST00000509085 CCDC27Q2M243 656 aa11.19□□□□□ -0.62
HMGCR-207ENST00000509085 CWF19L2Q2TBE0 894 aaKnown RBP11.19□□□□□ -0.62
HMGCR-207ENST00000509085 INTS3Q68E01 1043 aaKnown RBP11.19□□□□□ -0.62
HMGCR-207ENST00000509085 C15orf52Q6ZUT6 534 aaKnown RBP11.19□□□□□ -0.62
HMGCR-207ENST00000509085 TXNRD3Q86VQ6 643 aa11.19□□□□□ -0.62
HMGCR-207ENST00000509085 TSPYL6Q8N831 410 aa11.19□□□□□ -0.62
HMGCR-207ENST00000509085 MXD3Q9BW11 206 aa11.19□□□□□ -0.62
HMGCR-207ENST00000509085 ANGEL1Q9UNK9 670 aaKnown RBP11.19□□□□□ -0.62
HMGCR-207ENST00000509085 A0A1B0GUL6 1792 aa11.18□□□□□ -0.62
HMGCR-207ENST00000509085 RBBP6Q7Z6E9 1792 aaKnown RBP11.18□□□□□ -0.62
HMGCR-207ENST00000509085 ANKRD18BA2A2Z9 1011 aa11.18□□□□□ -0.62
HMGCR-207ENST00000509085 WTIPA6NIX2 430 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-207ENST00000509085 FKBP1AP62942 108 aaKnown RBP11.18□□□□□ -0.62
HMGCR-207ENST00000509085 GTF2IP78347 998 aa11.18□□□□□ -0.62
HMGCR-207ENST00000509085 MKRN3Q13064 507 aaKnown RBP11.18□□□□□ -0.62
HMGCR-207ENST00000509085 GCKRQ14397 625 aa11.18□□□□□ -0.62
HMGCR-207ENST00000509085 TWISTNBQ3B726 338 aaPredicted RBP11.18□□□□□ -0.62
HMGCR-207ENST00000509085 SUPT20HL1Q3ZLR7 823 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms