RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 SP8Q8IXZ3 490 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 OTUD7AQ8TE49 926 aaPredicted RBP12.69□□□□□ -0.38
RFC1-211ENST00000509084 ZNF622Q969S3 477 aaKnown RBP eCLIP12.69□□□□□ -0.382e-9■□□□□ 10.5
RFC1-211ENST00000509084 NEUROD6Q96NK8 337 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 CCDC8Q9H0W5 538 aaPredicted RBP12.69□□□□□ -0.38
RFC1-211ENST00000509084 DBNLQ9UJU6 430 aaKnown RBP12.69□□□□□ -0.38
RFC1-211ENST00000509084 LEMD3Q9Y2U8 911 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 ATP6V0A2Q9Y487 856 aa12.69□□□□□ -0.38
RFC1-211ENST00000509084 ATP2B4P23634 1241 aa12.68□□□□□ -0.38
RFC1-211ENST00000509084 GRIPAP1Q4V328 841 aa12.68□□□□□ -0.38
RFC1-211ENST00000509084 GORABQ5T7V8 394 aa12.68□□□□□ -0.38
RFC1-211ENST00000509084 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.68□□□□□ -0.38
RFC1-211ENST00000509084 DBNDD2Q9BQY9 259 aa12.68□□□□□ -0.38
RFC1-211ENST00000509084 PODXL2Q9NZ53 605 aa12.68□□□□□ -0.38
RFC1-211ENST00000509084 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.68□□□□□ -0.38
RFC1-211ENST00000509084 KIAA1551Q9HCM1 1747 aa12.68□□□□□ -0.38
RFC1-211ENST00000509084 TAF5LO75529 589 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 ATP5JP18859 108 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 CHRNA5P30532 468 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 TIMM10P62072 90 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 PRPF40BQ6NWY9 871 aaKnown RBP12.67□□□□□ -0.38
RFC1-211ENST00000509084 HELBQ8NG08 1087 aaPredicted RBP12.67□□□□□ -0.38
RFC1-211ENST00000509084 PI4K2BQ8TCG2 481 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 XAGE2Q96GT9 111 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 TLR7Q9NYK1 1049 aaKnown RBP12.67□□□□□ -0.38
RFC1-211ENST00000509084 ANKIB1Q9P2G1 1089 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 CACNA1SQ13698 1873 aa12.67□□□□□ -0.38
RFC1-211ENST00000509084 ZNF804BA4D1E1 1349 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 LTBP1Q14766 1721 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 UQCRFS1P1P0C7P4 283 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 CAVIN4Q5BKX8 364 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 TTC39AQ5SRH9 613 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 SOGA3Q5TF21 947 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 C15orf52Q6ZUT6 534 aaKnown RBP12.66□□□□□ -0.38
RFC1-211ENST00000509084 TTLL6Q8N841 843 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 ZNF512BQ96KM6 892 aaPredicted RBP12.66□□□□□ -0.38
RFC1-211ENST00000509084 GGA1Q9UJY5 639 aa12.66□□□□□ -0.38
RFC1-211ENST00000509084 EIF5BO60841 1220 aaKnown RBP12.65□□□□□ -0.38
RFC1-211ENST00000509084 GSPT1P15170 499 aaKnown RBP12.65□□□□□ -0.38
RFC1-211ENST00000509084 DPEP1P16444 411 aa12.65□□□□□ -0.38
RFC1-211ENST00000509084 CNTROBQ8N137 903 aa12.65□□□□□ -0.38
RFC1-211ENST00000509084 GNL3LQ9NVN8 582 aaKnown RBP12.65□□□□□ -0.38
RFC1-211ENST00000509084 NSFL1CQ9UNZ2 370 aaKnown RBP12.65□□□□□ -0.38
RFC1-211ENST00000509084 UFL1O94874 794 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 ARID4AP29374 1257 aaPredicted RBP12.64□□□□□ -0.39
RFC1-211ENST00000509084 ADORA1P30542 326 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 GPSM2P81274 684 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 TICAM2Q86XR7 235 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 MPNDQ8N594 471 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 PIM2Q9P1W9 311 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 MED23Q9ULK4 1368 aa12.64□□□□□ -0.39
RFC1-211ENST00000509084 BRCA1P38398 1863 aaKnown RBP12.63□□□□□ -0.39
RFC1-211ENST00000509084 SLX4Q8IY92 1834 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 TRIM6-TRIM34B2RNG4 842 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 SEMA3EO15041 775 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 CCDC93Q567U6 631 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 CCDC102BQ68D86 513 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 CASC1Q6TDU7 716 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 DPP8Q6V1X1 898 aaPredicted RBP12.63□□□□□ -0.39
RFC1-211ENST00000509084 VPS37DQ86XT2 251 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 KLHL34Q8N239 644 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 SUPT20HQ8NEM7 779 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 EVI5LQ96CN4 794 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 EYA3Q99504 573 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 HAUS7Q99871 368 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
RFC1-211ENST00000509084 RFX7Q2KHR2 1363 aa12.63□□□□□ -0.39
RFC1-211ENST00000509084 DUOX1Q9NRD9 1551 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 A0A0G2JLW4 131 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 CDC45O75419 566 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 SDSP20132 328 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 KCNA3P22001 575 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 PHKA1P46020 1223 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 ZNF804AQ7Z570 1209 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 RTKN2Q8IZC4 609 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 TBC1D16Q8TBP0 767 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 BOLA2Q9H3K6 86 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 AK9Q5TCS8 1911 aa12.62□□□□□ -0.39
RFC1-211ENST00000509084 PDS5AQ29RF7 1337 aaKnown RBP12.62□□□□□ -0.39
RFC1-211ENST00000509084 HIP1O00291 1037 aa12.61□□□□□ -0.39
RFC1-211ENST00000509084 HIBADHP31937 336 aaKnown RBP12.61□□□□□ -0.39
RFC1-211ENST00000509084 TTF1Q15361 905 aaPredicted RBP12.61□□□□□ -0.39
RFC1-211ENST00000509084 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
RFC1-211ENST00000509084 DALRD3Q5D0E6 543 aaKnown RBP12.61□□□□□ -0.39
RFC1-211ENST00000509084 FBXO33Q7Z6M2 555 aa12.61□□□□□ -0.39
RFC1-211ENST00000509084 C7orf43Q8WVR3 580 aa12.61□□□□□ -0.39
RFC1-211ENST00000509084 RILPL2Q969X0 211 aa12.61□□□□□ -0.39
RFC1-211ENST00000509084 RTFDC1Q9BY42 306 aaPredicted RBP12.61□□□□□ -0.39
RFC1-211ENST00000509084 SNED1Q8TER0 1413 aa12.61□□□□□ -0.39
RFC1-211ENST00000509084 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
RFC1-211ENST00000509084 SNAP23O00161 211 aa12.6□□□□□ -0.39
RFC1-211ENST00000509084 FAM84BQ96KN1 310 aaPredicted RBP12.6□□□□□ -0.39
RFC1-211ENST00000509084 DNAJC2Q99543 621 aaKnown RBP12.6□□□□□ -0.39
RFC1-211ENST00000509084 PAG1Q9NWQ8 432 aa12.6□□□□□ -0.39
RFC1-211ENST00000509084 DENND2AQ9ULE3 1009 aa12.6□□□□□ -0.39
RFC1-211ENST00000509084 MYH13Q9UKX3 1938 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 C21orf2O43822 256 aa12.59□□□□□ -0.39
RFC1-211ENST00000509084 IGSF3O75054 1194 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms