RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 ZNF609O15014 1411 aa13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 COL4A1P02462 1669 aa13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 ADORA1P30542 326 aa13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 ZNF804AQ7Z570 1209 aa13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 TBC1D16Q8TBP0 767 aa13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 ZC3H12CQ9C0D7 883 aaKnown RBP13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 ECHDC1Q9NTX5 307 aa13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.48□□□□□ -0.25
BRCC3P1-201ENST00000508559 CACNA1SQ13698 1873 aa13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 RIMBP2O15034 1052 aa13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 FGFR2P21802 821 aa13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 PDE4AP27815 886 aa13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 SLC51AQ86UW1 340 aa13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 OTUD7AQ8TE49 926 aaPredicted RBP13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 TLR7Q9NYK1 1049 aaKnown RBP13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 DBNLQ9UJU6 430 aaKnown RBP13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 SLX4Q8IY92 1834 aa13.47□□□□□ -0.25
BRCC3P1-201ENST00000508559 TTC41PQ6P2S7 1318 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 DLEC1Q9Y238 1755 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 UQCRFS1P1P0C7P4 283 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 HOXD11P31277 338 aaPredicted RBP13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 HIBADHP31937 336 aaKnown RBP13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 GYG1P46976 350 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 PDE1AP54750 535 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 WASHC4Q2M389 1173 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 SKAP1Q86WV1 359 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 PLEKHM2Q8IWE5 1019 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 C7orf43Q8WVR3 580 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 GPR101Q96P66 508 aaPredicted RBP13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 POLLQ9UGP5 575 aa13.46□□□□□ -0.25
BRCC3P1-201ENST00000508559 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
BRCC3P1-201ENST00000508559 BCAMP50895 628 aa13.45□□□□□ -0.26
BRCC3P1-201ENST00000508559 FKBP4Q02790 459 aaKnown RBP eCLIP13.45□□□□□ -0.26
BRCC3P1-201ENST00000508559 GPR162Q16538 588 aa13.45□□□□□ -0.26
BRCC3P1-201ENST00000508559 TSHZ3Q63HK5 1081 aa13.45□□□□□ -0.26
BRCC3P1-201ENST00000508559 ARHGAP27Q6ZUM4 889 aa13.45□□□□□ -0.26
BRCC3P1-201ENST00000508559 AOX1Q06278 1338 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 WTIPA6NIX2 430 aaPredicted RBP13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 TRIM6-TRIM34B2RNG4 842 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 PPIP5K2O43314 1243 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 PHKA1P46020 1223 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 CCDC102BQ68D86 513 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 PSMD1Q99460 953 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 DNAJC2Q99543 621 aaKnown RBP13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 TAOK3Q9H2K8 898 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 BOLA2Q9H3K6 86 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 STAP2Q9UGK3 403 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 MED23Q9ULK4 1368 aa13.44□□□□□ -0.26
BRCC3P1-201ENST00000508559 DCAF8L1A6NGE4 600 aa13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 ATP5JP18859 108 aa13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 KLRK1P26718 216 aa13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 C15orf52Q6ZUT6 534 aaKnown RBP13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 LARGE2Q8N3Y3 721 aa13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 FBXW7Q969H0 707 aa13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 FAM84BQ96KN1 310 aaPredicted RBP13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 IQSEC3Q9UPP2 1182 aaPredicted RBP13.43□□□□□ -0.26
BRCC3P1-201ENST00000508559 LRRC37AA6NMS7 1700 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 KIAA1551Q9HCM1 1747 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 CHAF1AQ13111 956 aaPredicted RBP13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 AOC3Q16853 763 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 DOK7Q18PE1 504 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 FBXO33Q7Z6M2 555 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 RILPL2Q969X0 211 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 COA1Q9GZY4 146 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 SNRKQ9NRH2 765 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 ZNF277Q9NRM2 450 aaPredicted RBP13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 RNF216Q9NWF9 866 aaPredicted RBP13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 DENND2AQ9ULE3 1009 aa13.42□□□□□ -0.26
BRCC3P1-201ENST00000508559 MAP4K4O95819 1239 aaPredicted RBP13.41□□□□□ -0.26
BRCC3P1-201ENST00000508559 TTC22Q5TAA0 569 aa13.41□□□□□ -0.26
BRCC3P1-201ENST00000508559 TXNRD3Q86VQ6 643 aa13.41□□□□□ -0.26
BRCC3P1-201ENST00000508559 NIM1KQ8IY84 436 aa13.41□□□□□ -0.26
BRCC3P1-201ENST00000508559 JDP2Q8WYK2 163 aa13.41□□□□□ -0.26
BRCC3P1-201ENST00000508559 VPS33BQ9H267 617 aa13.41□□□□□ -0.26
BRCC3P1-201ENST00000508559 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
BRCC3P1-201ENST00000508559 SALL3Q9BXA9 1300 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 SEMA3EO15041 775 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 ARID4AP29374 1257 aaPredicted RBP13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 IARSP41252 1262 aaKnown RBP13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 KIAA2012Q0VF49 1180 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 CNTROBQ8N137 903 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 SPATA5Q8NB90 893 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 PI4K2BQ8TCG2 481 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 ZNF512BQ96KM6 892 aaPredicted RBP13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 DBNDD1Q9H9R9 158 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 CD209Q9NNX6 404 aa13.4□□□□□ -0.26
BRCC3P1-201ENST00000508559 GOLIM4O00461 696 aa13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 ECE2O60344 883 aa13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 GRIN3BO60391 1043 aa13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 RASSF7Q02833 373 aa13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 RASGRF1Q13972 1273 aa13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 TTF1Q15361 905 aaPredicted RBP13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 LRRFIP1Q32MZ4 808 aaKnown RBP13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 HAUS7Q99871 368 aa13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 PAG1Q9NWQ8 432 aa13.39□□□□□ -0.27
BRCC3P1-201ENST00000508559 A0A1B0GUL6 1792 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 NFKBIEO00221 500 aa13.38□□□□□ -0.27
BRCC3P1-201ENST00000508559 MCAMP43121 646 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms