RNA–Protein interactions for RNA: ENST00000508282.1

DHFR-204, Transcript of dihydrofolate reductase, humanhuman

TSL 3

Gene DHFR, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-204ENST00000508282 SELPP16109 830 aa9.48□□□□□ -0.89
DHFR-204ENST00000508282 FBXO11Q86XK2 927 aa9.48□□□□□ -0.89
DHFR-204ENST00000508282 CACTIN-AS1Q8N1I8 211 aa9.48□□□□□ -0.89
DHFR-204ENST00000508282 RBCK1Q9BYM8 510 aa9.48□□□□□ -0.89
DHFR-204ENST00000508282 PEAR1Q5VY43 1037 aaPredicted RBP9.47□□□□□ -0.89
DHFR-204ENST00000508282 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
DHFR-204ENST00000508282 ZKSCAN3Q9BRR0 538 aa9.47□□□□□ -0.89
DHFR-204ENST00000508282 LATS2Q9NRM7 1088 aa9.47□□□□□ -0.89
DHFR-204ENST00000508282 PDIA4P13667 645 aaKnown RBP9.46□□□□□ -0.9
DHFR-204ENST00000508282 EDN3P14138 238 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 CDC27P30260 824 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 ORC1Q13415 861 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 USPL1Q5W0Q7 1092 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 TMC1Q8TDI8 760 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 NACC1Q96RE7 527 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 OSMRQ99650 979 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 SH2B1Q9NRF2 756 aaPredicted RBP9.46□□□□□ -0.9
DHFR-204ENST00000508282 PPME1Q9Y570 386 aa9.46□□□□□ -0.9
DHFR-204ENST00000508282 PDE2AO00408 941 aaPredicted RBP9.45□□□□□ -0.9
DHFR-204ENST00000508282 SETDB1Q15047 1291 aa9.45□□□□□ -0.9
DHFR-204ENST00000508282 TMC7Q7Z402 723 aa9.45□□□□□ -0.9
DHFR-204ENST00000508282 NIF3L1Q9GZT8 377 aa9.45□□□□□ -0.9
DHFR-204ENST00000508282 ADAM19Q9H013 955 aa9.45□□□□□ -0.9
DHFR-204ENST00000508282 DCTN4Q9UJW0 460 aa9.45□□□□□ -0.9
DHFR-204ENST00000508282 LINC01387J3KSC0 135 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 DLL1O00548 723 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 PTPRAP18433 802 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 EPHA1P21709 976 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 TXNDC11Q6PKC3 985 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 GALNT12Q8IXK2 581 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 TMEM102Q8N9M5 508 aaPredicted RBP9.44□□□□□ -0.9
DHFR-204ENST00000508282 NXPE3Q969Y0 559 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 LENG1Q96BZ8 264 aaPredicted RBP9.44□□□□□ -0.9
DHFR-204ENST00000508282 DMRTB1Q96MA1 342 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 MUC3BQ9H195 1237 aa9.44□□□□□ -0.9
DHFR-204ENST00000508282 C9orf172C9J069 976 aa9.43□□□□□ -0.9
DHFR-204ENST00000508282 NEFLP07196 543 aa9.43□□□□□ -0.9
DHFR-204ENST00000508282 PATL2C9JE40 543 aaKnown RBP9.42□□□□□ -0.9
DHFR-204ENST00000508282 TM4SF5O14894 197 aa9.42□□□□□ -0.9
DHFR-204ENST00000508282 MAPK1P28482 360 aa9.42□□□□□ -0.9
DHFR-204ENST00000508282 CDC25BP30305 580 aa9.42□□□□□ -0.9
DHFR-204ENST00000508282 ADGRE1Q14246 886 aa9.42□□□□□ -0.9
DHFR-204ENST00000508282 AEBP1Q8IUX7 1158 aa9.42□□□□□ -0.9
DHFR-204ENST00000508282 ALKBH8Q96BT7 664 aaKnown RBP9.42□□□□□ -0.9
DHFR-204ENST00000508282 SRA1Q9HD15 236 aaKnown RBP9.42□□□□□ -0.9
DHFR-204ENST00000508282 EIF1AYO14602 144 aaKnown RBP9.41□□□□□ -0.9
DHFR-204ENST00000508282 CPNE3O75131 537 aaKnown RBP9.41□□□□□ -0.9
DHFR-204ENST00000508282 MBTPS1Q14703 1052 aa9.41□□□□□ -0.9
DHFR-204ENST00000508282 MAP4K3Q8IVH8 894 aa9.41□□□□□ -0.9
DHFR-204ENST00000508282 GALNT11Q8NCW6 608 aa9.41□□□□□ -0.9
DHFR-204ENST00000508282 A0A1W2PP55 124 aa9.4□□□□□ -0.9
DHFR-204ENST00000508282 GATA4P43694 442 aa9.4□□□□□ -0.9
DHFR-204ENST00000508282 IGF2-ASQ6U949 168 aa9.4□□□□□ -0.9
DHFR-204ENST00000508282 BHLHE41Q9C0J9 482 aaPredicted RBP9.4□□□□□ -0.9
DHFR-204ENST00000508282 USP21Q9UK80 565 aa9.4□□□□□ -0.9
DHFR-204ENST00000508282 SOX13Q9UN79 622 aa9.4□□□□□ -0.9
DHFR-204ENST00000508282 NRG1Q02297 640 aaPredicted RBP9.39□□□□□ -0.91
DHFR-204ENST00000508282 CARD10Q9BWT7 1032 aa9.39□□□□□ -0.91
DHFR-204ENST00000508282 DNAJC25Q9H1X3 360 aa9.39□□□□□ -0.91
DHFR-204ENST00000508282 FAM177BA6PVY3 158 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 METTL12A8MUP2 240 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 H3BRJ5 948 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 FSCN2O14926 492 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 DSC3Q14574 896 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 VN1R5Q7Z5H4 357 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 BSNDQ8WZ55 320 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 CCDC74AQ96AQ1 378 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 CSRNP1Q96S65 589 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 NPHS2Q9NP85 383 aa9.38□□□□□ -0.91
DHFR-204ENST00000508282 KIAA0319Q5VV43 1072 aa9.37□□□□□ -0.91
DHFR-204ENST00000508282 TXNRD3Q86VQ6 643 aa9.37□□□□□ -0.91
DHFR-204ENST00000508282 CCNJLQ8IV13 435 aa9.37□□□□□ -0.91
DHFR-204ENST00000508282 ASAP3Q8TDY4 903 aa9.37□□□□□ -0.91
DHFR-204ENST00000508282 TCF12Q99081 682 aa9.37□□□□□ -0.91
DHFR-204ENST00000508282 TREHO43280 583 aa9.36□□□□□ -0.91
DHFR-204ENST00000508282 CABP4P57796 275 aa9.36□□□□□ -0.91
DHFR-204ENST00000508282 DOC2BQ14184 412 aa9.36□□□□□ -0.91
DHFR-204ENST00000508282 FOXD4L6Q3SYB3 417 aaPredicted RBP9.36□□□□□ -0.91
DHFR-204ENST00000508282 FAM117BQ6P1L5 589 aa9.36□□□□□ -0.91
DHFR-204ENST00000508282 FOXD4L3Q6VB84 417 aaPredicted RBP9.36□□□□□ -0.91
DHFR-204ENST00000508282 LIN7BQ9HAP6 207 aa9.36□□□□□ -0.91
DHFR-204ENST00000508282 KCNK4Q9NYG8 393 aa9.36□□□□□ -0.91
DHFR-204ENST00000508282 CD68P34810 354 aaPredicted RBP9.35□□□□□ -0.91
DHFR-204ENST00000508282 HGSNATQ68CP4 663 aa9.35□□□□□ -0.91
DHFR-204ENST00000508282 KLHL23Q8NBE8 558 aa9.35□□□□□ -0.91
DHFR-204ENST00000508282 DCAF11Q8TEB1 546 aa9.35□□□□□ -0.91
DHFR-204ENST00000508282 WNT8BQ93098 351 aa9.35□□□□□ -0.91
DHFR-204ENST00000508282 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
DHFR-204ENST00000508282 SEC31BQ9NQW1 1179 aa9.35□□□□□ -0.91
DHFR-204ENST00000508282 TPSG1Q9NRR2 321 aa9.35□□□□□ -0.91
DHFR-204ENST00000508282 NOS3P29474 1203 aa9.34□□□□□ -0.91
DHFR-204ENST00000508282 GRIA4P48058 902 aa9.34□□□□□ -0.91
DHFR-204ENST00000508282 PIP4K2BP78356 416 aa9.34□□□□□ -0.91
DHFR-204ENST00000508282 PLCB3Q01970 1234 aa9.34□□□□□ -0.91
DHFR-204ENST00000508282 WFDC12Q8WWY7 111 aa9.34□□□□□ -0.91
DHFR-204ENST00000508282 KLHDC7BQ96G42 594 aa9.34□□□□□ -0.91
DHFR-204ENST00000508282 ASB16Q96NS5 453 aa9.34□□□□□ -0.91
DHFR-204ENST00000508282 F8W735 103 aaPredicted RBP9.33□□□□□ -0.92
DHFR-204ENST00000508282 DDX3YO15523 660 aaKnown RBP9.33□□□□□ -0.92
DHFR-204ENST00000508282 ADAM11O75078 769 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms