RNA–Protein interactions for RNA: ENST00000508006.1

SNCB-204, Transcript of synuclein beta, humanhuman

TSL 2

Gene SNCB, Length 969 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCB-204ENST00000508006 TAF7LQ5H9L4 462 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 DPP8Q6V1X1 898 aaPredicted RBP27.84■■■□□ 2.05
SNCB-204ENST00000508006 RPAP2Q8IXW5 612 aaPredicted RBP27.84■■■□□ 2.05
SNCB-204ENST00000508006 GPR101Q96P66 508 aaPredicted RBP27.84■■■□□ 2.05
SNCB-204ENST00000508006 CRBNQ96SW2 442 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 MPHOSPH8Q99549 860 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 GPRC5DQ9NZD1 345 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 FBXO3Q9UK99 471 aa27.84■■■□□ 2.05
SNCB-204ENST00000508006 SRGAP3O43295 1099 aa27.83■■■□□ 2.05
SNCB-204ENST00000508006 CYP4F22Q6NT55 531 aa27.83■■■□□ 2.05
SNCB-204ENST00000508006 CXCL9Q07325 125 aa27.82■■■□□ 2.04
SNCB-204ENST00000508006 CST9Q5W186 159 aa27.82■■■□□ 2.04
SNCB-204ENST00000508006 MPNDQ8N594 471 aa27.82■■■□□ 2.04
SNCB-204ENST00000508006 RFX5P48382 616 aaPredicted RBP27.81■■■□□ 2.04
SNCB-204ENST00000508006 C1orf115Q9H7X2 142 aa27.81■■■□□ 2.04
SNCB-204ENST00000508006 CIAPIN1Q6FI81 312 aa27.8■■■□□ 2.04
SNCB-204ENST00000508006 CEP85Q6P2H3 762 aa27.8■■■□□ 2.04
SNCB-204ENST00000508006 LDHAL6AQ6ZMR3 332 aa27.8■■■□□ 2.04
SNCB-204ENST00000508006 SSH3Q8TE77 659 aa27.8■■■□□ 2.04
SNCB-204ENST00000508006 COPRSQ9NQ92 184 aa27.8■■■□□ 2.04
SNCB-204ENST00000508006 TLL2Q9Y6L7 1015 aa27.8■■■□□ 2.04
SNCB-204ENST00000508006 TRPM7Q96QT4 1865 aa27.8■■■□□ 2.04
SNCB-204ENST00000508006 GMPSP49915 693 aaPredicted RBP27.79■■■□□ 2.04
SNCB-204ENST00000508006 PTPN12Q05209 780 aaKnown RBP27.79■■■□□ 2.04
SNCB-204ENST00000508006 POLA2Q14181 598 aa27.79■■■□□ 2.04
SNCB-204ENST00000508006 TNIP1Q15025 636 aa27.79■■■□□ 2.04
SNCB-204ENST00000508006 RTFDC1Q9BY42 306 aaPredicted RBP27.79■■■□□ 2.04
SNCB-204ENST00000508006 A0A1B0GUL6 1792 aa27.78■■■□□ 2.04
SNCB-204ENST00000508006 ABHD8Q96I13 439 aa27.78■■■□□ 2.04
SNCB-204ENST00000508006 PNMA6EA0A0J9YXQ4 647 aa27.77■■■□□ 2.04
SNCB-204ENST00000508006 HMMRO75330 724 aa27.77■■■□□ 2.04
SNCB-204ENST00000508006 CELF2O95319 508 aaKnown RBP27.77■■■□□ 2.04
SNCB-204ENST00000508006 ZNF594Q96JF6 807 aaPredicted RBP27.77■■■□□ 2.04
SNCB-204ENST00000508006 ANKRD2Q9GZV1 360 aa27.77■■■□□ 2.04
SNCB-204ENST00000508006 PODXL2Q9NZ53 605 aa27.77■■■□□ 2.04
SNCB-204ENST00000508006 RAD17O75943 681 aa27.76■■■□□ 2.03
SNCB-204ENST00000508006 CIAO1O76071 339 aa27.76■■■□□ 2.03
SNCB-204ENST00000508006 CNNM1Q9NRU3 951 aa27.76■■■□□ 2.03
SNCB-204ENST00000508006 MINPP1Q9UNW1 487 aa27.76■■■□□ 2.03
SNCB-204ENST00000508006 MROH5Q6ZUA9 1318 aa27.75■■■□□ 2.03
SNCB-204ENST00000508006 MAP2K2P36507 400 aa27.75■■■□□ 2.03
SNCB-204ENST00000508006 KIAA2012Q0VF49 1180 aa27.75■■■□□ 2.03
SNCB-204ENST00000508006 RIPOR2Q9Y4F9 1068 aa27.75■■■□□ 2.03
SNCB-204ENST00000508006 XDHP47989 1333 aa27.74■■■□□ 2.03
SNCB-204ENST00000508006 GLIS2Q9BZE0 524 aaPredicted RBP27.74■■■□□ 2.03
SNCB-204ENST00000508006 ZNF408Q9H9D4 720 aa27.74■■■□□ 2.03
SNCB-204ENST00000508006 EYA2O00167 538 aa27.73■■■□□ 2.03
SNCB-204ENST00000508006 AOC2O75106 756 aa27.73■■■□□ 2.03
SNCB-204ENST00000508006 H7C1D1 291 aa27.72■■■□□ 2.03
SNCB-204ENST00000508006 SAPCD2Q86UD0 394 aa27.72■■■□□ 2.03
SNCB-204ENST00000508006 EXOC6Q8TAG9 804 aa27.72■■■□□ 2.03
SNCB-204ENST00000508006 KLHDC4Q8TBB5 520 aa27.72■■■□□ 2.03
SNCB-204ENST00000508006 ZC3H15Q8WU90 426 aaKnown RBP27.72■■■□□ 2.03
SNCB-204ENST00000508006 CNOT7Q9UIV1 285 aaKnown RBP27.72■■■□□ 2.03
SNCB-204ENST00000508006 NSFL1CQ9UNZ2 370 aaKnown RBP27.72■■■□□ 2.03
SNCB-204ENST00000508006 IL15P40933 162 aaPredicted RBP27.71■■■□□ 2.03
SNCB-204ENST00000508006 CHRNDQ07001 517 aa27.71■■■□□ 2.03
SNCB-204ENST00000508006 CDC37L1Q7L3B6 337 aa27.71■■■□□ 2.03
SNCB-204ENST00000508006 ANKIB1Q9P2G1 1089 aa27.71■■■□□ 2.03
SNCB-204ENST00000508006 TSKSQ9UJT2 592 aa27.71■■■□□ 2.03
SNCB-204ENST00000508006 DUOX1Q9NRD9 1551 aa27.7■■■□□ 2.03
SNCB-204ENST00000508006 CCDC85CA6NKD9 419 aa27.7■■■□□ 2.02
SNCB-204ENST00000508006 GPSM2P81274 684 aa27.7■■■□□ 2.02
SNCB-204ENST00000508006 SIRT2Q8IXJ6 389 aa27.7■■■□□ 2.02
SNCB-204ENST00000508006 PUS3Q9BZE2 481 aaKnown RBP27.7■■■□□ 2.02
SNCB-204ENST00000508006 PGAP2Q9UHJ9 254 aa27.7■■■□□ 2.02
SNCB-204ENST00000508006 LEMD3Q9Y2U8 911 aa27.7■■■□□ 2.02
SNCB-204ENST00000508006 NOP58Q9Y2X3 529 aaKnown RBP27.7■■■□□ 2.02
SNCB-204ENST00000508006 ATP2B4P23634 1241 aa27.69■■■□□ 2.02
SNCB-204ENST00000508006 LRRC24Q50LG9 513 aa27.69■■■□□ 2.02
SNCB-204ENST00000508006 ATG9AQ7Z3C6 839 aa27.69■■■□□ 2.02
SNCB-204ENST00000508006 HIRAP54198 1017 aaPredicted RBP27.68■■■□□ 2.02
SNCB-204ENST00000508006 HSP90AB4PQ58FF6 505 aa27.68■■■□□ 2.02
SNCB-204ENST00000508006 GGA1Q9UJY5 639 aa27.68■■■□□ 2.02
SNCB-204ENST00000508006 PA2G4Q9UQ80 394 aaKnown RBP27.68■■■□□ 2.02
SNCB-204ENST00000508006 CA12O43570 354 aa27.67■■■□□ 2.02
SNCB-204ENST00000508006 G3BP1Q13283 466 aaKnown RBP eCLIP27.67■■■□□ 2.02
SNCB-204ENST00000508006 WASHC4Q2M389 1173 aa27.67■■■□□ 2.02
SNCB-204ENST00000508006 HHIPL1Q96JK4 782 aa27.67■■■□□ 2.02
SNCB-204ENST00000508006 EYA3Q99504 573 aa27.67■■■□□ 2.02
SNCB-204ENST00000508006 SIL1Q9H173 461 aa27.67■■■□□ 2.02
SNCB-204ENST00000508006 PCDHB15Q9Y5E8 787 aa27.67■■■□□ 2.02
SNCB-204ENST00000508006 IRX6P78412 446 aaPredicted RBP27.66■■■□□ 2.02
SNCB-204ENST00000508006 METTL24Q5JXM2 366 aa27.66■■■□□ 2.02
SNCB-204ENST00000508006 TBC1D16Q8TBP0 767 aa27.66■■■□□ 2.02
SNCB-204ENST00000508006 YDJCA8MPS7 323 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 C6orf229H3BNL8 230 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 SURF6O75683 361 aaKnown RBP27.65■■■□□ 2.02
SNCB-204ENST00000508006 PDE8BO95263 885 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 NEFLP07196 543 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 MICALL2Q8IY33 904 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 VGLL2Q8N8G2 317 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 TRPM4Q8TD43 1214 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 CEP126Q9P2H0 1117 aa27.65■■■□□ 2.02
SNCB-204ENST00000508006 THSD7BQ9C0I4 1608 aa27.64■■■□□ 2.02
SNCB-204ENST00000508006 RIMBP2O15034 1052 aa27.64■■■□□ 2.02
SNCB-204ENST00000508006 UBE4AQ14139 1066 aa27.64■■■□□ 2.02
SNCB-204ENST00000508006 USP48Q86UV5 1035 aa27.64■■■□□ 2.02
SNCB-204ENST00000508006 POLLQ9UGP5 575 aa27.64■■■□□ 2.02
SNCB-204ENST00000508006 ZBTB12Q9Y330 459 aaPredicted RBP27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms