RNA–Protein interactions for RNA: ENST00000507968.1

SSBP2-209, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 4

Gene SSBP2, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-209ENST00000507968 C7orf43Q8WVR3 580 aa13.11□□□□□ -0.31
SSBP2-209ENST00000507968 RILPL2Q969X0 211 aa13.11□□□□□ -0.31
SSBP2-209ENST00000507968 PIM2Q9P1W9 311 aa13.11□□□□□ -0.31
SSBP2-209ENST00000507968 TUBGCP6Q96RT7 1819 aa13.11□□□□□ -0.31
SSBP2-209ENST00000507968 SEMA3EO15041 775 aa13.1□□□□□ -0.31
SSBP2-209ENST00000507968 HIBADHP31937 336 aaKnown RBP13.1□□□□□ -0.31
SSBP2-209ENST00000507968 FAM84BQ96KN1 310 aaPredicted RBP13.1□□□□□ -0.31
SSBP2-209ENST00000507968 BACH2Q9BYV9 841 aa13.1□□□□□ -0.31
SSBP2-209ENST00000507968 ZNF609O15014 1411 aa13.1□□□□□ -0.31
SSBP2-209ENST00000507968 C6orf229H3BNL8 230 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 SNAP23O00161 211 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 HIP1O00291 1037 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 CDC45O75419 566 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 ARID4AP29374 1257 aaPredicted RBP13.09□□□□□ -0.31
SSBP2-209ENST00000507968 BCAMP50895 628 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 TTF1Q15361 905 aaPredicted RBP13.09□□□□□ -0.31
SSBP2-209ENST00000507968 LRRFIP1Q32MZ4 808 aaKnown RBP13.09□□□□□ -0.31
SSBP2-209ENST00000507968 SOGA3Q5TF21 947 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 DPP8Q6V1X1 898 aaPredicted RBP13.09□□□□□ -0.31
SSBP2-209ENST00000507968 RTKN2Q8IZC4 609 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 TBC1D16Q8TBP0 767 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 EYA3Q99504 573 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 LAMB2P55268 1798 aa13.09□□□□□ -0.31
SSBP2-209ENST00000507968 IGSF3O75054 1194 aa13.08□□□□□ -0.32
SSBP2-209ENST00000507968 UFL1O94874 794 aa13.08□□□□□ -0.32
SSBP2-209ENST00000507968 PHKA1P46020 1223 aa13.08□□□□□ -0.32
SSBP2-209ENST00000507968 SUPT20HQ8NEM7 779 aa13.08□□□□□ -0.32
SSBP2-209ENST00000507968 ZC3H12CQ9C0D7 883 aaKnown RBP13.08□□□□□ -0.32
SSBP2-209ENST00000507968 PPP1R1BQ9UD71 204 aaPredicted RBP13.08□□□□□ -0.32
SSBP2-209ENST00000507968 POLLQ9UGP5 575 aa13.08□□□□□ -0.32
SSBP2-209ENST00000507968 LRP5O75197 1615 aa13.07□□□□□ -0.32
SSBP2-209ENST00000507968 MAP4K4O95819 1239 aaPredicted RBP13.07□□□□□ -0.32
SSBP2-209ENST00000507968 GYG1P46976 350 aa13.07□□□□□ -0.32
SSBP2-209ENST00000507968 FKBP4Q02790 459 aaKnown RBP eCLIP13.07□□□□□ -0.32
SSBP2-209ENST00000507968 C8orf34Q49A92 452 aa13.07□□□□□ -0.32
SSBP2-209ENST00000507968 DALRD3Q5D0E6 543 aaKnown RBP13.07□□□□□ -0.32
SSBP2-209ENST00000507968 ZNF804AQ7Z570 1209 aa13.07□□□□□ -0.32
SSBP2-209ENST00000507968 DNAJC2Q99543 621 aaKnown RBP13.07□□□□□ -0.32
SSBP2-209ENST00000507968 RTFDC1Q9BY42 306 aaPredicted RBP13.07□□□□□ -0.32
SSBP2-209ENST00000507968 VPS33BQ9H267 617 aa13.07□□□□□ -0.32
SSBP2-209ENST00000507968 PAG1Q9NWQ8 432 aa13.07□□□□□ -0.32
SSBP2-209ENST00000507968 DENND2AQ9ULE3 1009 aa13.07□□□□□ -0.32
SSBP2-209ENST00000507968 WTIPA6NIX2 430 aaPredicted RBP13.06□□□□□ -0.32
SSBP2-209ENST00000507968 FRAT2O75474 233 aaPredicted RBP13.06□□□□□ -0.32
SSBP2-209ENST00000507968 CCDC93Q567U6 631 aa13.06□□□□□ -0.32
SSBP2-209ENST00000507968 KBTBD3Q8NAB2 608 aa13.06□□□□□ -0.32
SSBP2-209ENST00000507968 SPATA5Q8NB90 893 aa13.06□□□□□ -0.32
SSBP2-209ENST00000507968 RUFY2Q8WXA3 655 aa13.06□□□□□ -0.32
SSBP2-209ENST00000507968 HMG20BQ9P0W2 317 aa13.06□□□□□ -0.32
SSBP2-209ENST00000507968 MYH3P11055 1940 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 GOLIM4O00461 696 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 C21orf2O43822 256 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 CHMLP26374 656 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 MCAMP43121 646 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 ZAP70P43403 619 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 WASHC4Q2M389 1173 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 ZSCAN25Q6NSZ9 544 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 TBC1D9Q6ZT07 1266 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 TDRD7Q8NHU6 1098 aaKnown RBP13.05□□□□□ -0.32
SSBP2-209ENST00000507968 COA1Q9GZY4 146 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 PDS5AQ29RF7 1337 aaKnown RBP13.05□□□□□ -0.32
SSBP2-209ENST00000507968 IRS2Q9Y4H2 1338 aa13.05□□□□□ -0.32
SSBP2-209ENST00000507968 TNRC6CQ9HCJ0 1690 aaKnown RBP13.05□□□□□ -0.32
SSBP2-209ENST00000507968 ZFYP08048 801 aaPredicted RBP13.04□□□□□ -0.32
SSBP2-209ENST00000507968 IL1R1P14778 569 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 RASGRF1Q13972 1273 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 SCARF1Q14162 830 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 TMED8Q6PL24 325 aaPredicted RBP13.04□□□□□ -0.32
SSBP2-209ENST00000507968 TXNRD3Q86VQ6 643 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 PSMD1Q99460 953 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 FSD1Q9BTV5 496 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.04□□□□□ -0.32
SSBP2-209ENST00000507968 CD209Q9NNX6 404 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 SNRKQ9NRH2 765 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 MED23Q9ULK4 1368 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 CASZ1Q86V15 1759 aa13.04□□□□□ -0.32
SSBP2-209ENST00000507968 G3V3G9 751 aa13.03□□□□□ -0.32
SSBP2-209ENST00000507968 CYP2E1P05181 493 aaPredicted RBP13.03□□□□□ -0.32
SSBP2-209ENST00000507968 DCAF8Q5TAQ9 597 aa13.03□□□□□ -0.32
SSBP2-209ENST00000507968 PODNQ7Z5L7 613 aa13.03□□□□□ -0.32
SSBP2-209ENST00000507968 ZGPATQ8N5A5 531 aaKnown RBP13.03□□□□□ -0.32
SSBP2-209ENST00000507968 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
SSBP2-209ENST00000507968 UPF2Q9HAU5 1272 aaKnown RBP13.03□□□□□ -0.32
SSBP2-209ENST00000507968 DIAPH3Q9NSV4 1193 aa13.03□□□□□ -0.32
SSBP2-209ENST00000507968 ZNF219Q9P2Y4 722 aaPredicted RBP13.03□□□□□ -0.32
SSBP2-209ENST00000507968 KLRK1P26718 216 aa13.02□□□□□ -0.33
SSBP2-209ENST00000507968 MAP3K12Q12852 859 aa13.02□□□□□ -0.33
SSBP2-209ENST00000507968 SPTY2D1Q68D10 685 aaPredicted RBP13.02□□□□□ -0.33
SSBP2-209ENST00000507968 OLFM4Q6UX06 510 aa13.02□□□□□ -0.33
SSBP2-209ENST00000507968 EDC3Q96F86 508 aaKnown RBP13.02□□□□□ -0.33
SSBP2-209ENST00000507968 RFX7Q2KHR2 1363 aa13.02□□□□□ -0.33
SSBP2-209ENST00000507968 RIMBP2O15034 1052 aa13.01□□□□□ -0.33
SSBP2-209ENST00000507968 RNF113AO15541 343 aaKnown RBP13.01□□□□□ -0.33
SSBP2-209ENST00000507968 EPB41L2O43491 1005 aaKnown RBP13.01□□□□□ -0.33
SSBP2-209ENST00000507968 REC8O95072 547 aa13.01□□□□□ -0.33
SSBP2-209ENST00000507968 ESYT1Q9BSJ8 1104 aa13.01□□□□□ -0.33
SSBP2-209ENST00000507968 ANTXR1Q9H6X2 564 aa13.01□□□□□ -0.33
SSBP2-209ENST00000507968 HELLSQ9NRZ9 838 aa13.01□□□□□ -0.33
SSBP2-209ENST00000507968 NDUFB9Q9Y6M9 179 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms