RNA–Protein interactions for RNA: ENST00000507376.1

COPS4-205, Transcript of COP9 signalosome subunit 4, humanhuman

TSL 5

Gene COPS4, Length 438 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4-205ENST00000507376 UFL1O94874 794 aa11.76□□□□□ -0.53
COPS4-205ENST00000507376 SASH1O94885 1247 aa11.76□□□□□ -0.53
COPS4-205ENST00000507376 VIL1P09327 827 aaKnown RBP11.76□□□□□ -0.53
COPS4-205ENST00000507376 RPS12P25398 132 aaKnown RBP11.76□□□□□ -0.53
COPS4-205ENST00000507376 ZNF280AP59817 542 aaPredicted RBP11.76□□□□□ -0.53
COPS4-205ENST00000507376 TCIRG1Q13488 830 aa11.76□□□□□ -0.53
COPS4-205ENST00000507376 NBPF9Q3BBW0 867 aa11.76□□□□□ -0.53
COPS4-205ENST00000507376 FBXO46Q6PJ61 603 aaPredicted RBP11.76□□□□□ -0.53
COPS4-205ENST00000507376 GMLQ99445 158 aa11.76□□□□□ -0.53
COPS4-205ENST00000507376 CHPF2Q9P2E5 772 aa11.76□□□□□ -0.53
COPS4-205ENST00000507376 PNISRQ8TF01 805 aaKnown RBP11.75□□□□□ -0.53
COPS4-205ENST00000507376 ZNF609O15014 1411 aa11.75□□□□□ -0.53
COPS4-205ENST00000507376 NBR1Q14596 966 aa11.74□□□□□ -0.53
COPS4-205ENST00000507376 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
COPS4-205ENST00000507376 MYOZ2Q9NPC6 264 aa11.74□□□□□ -0.53
COPS4-205ENST00000507376 EN2P19622 333 aaPredicted RBP11.73□□□□□ -0.53
COPS4-205ENST00000507376 PTPN12Q05209 780 aaKnown RBP11.73□□□□□ -0.53
COPS4-205ENST00000507376 AOX1Q06278 1338 aa11.73□□□□□ -0.53
COPS4-205ENST00000507376 TTLL12Q14166 644 aaPredicted RBP11.73□□□□□ -0.53
COPS4-205ENST00000507376 SF3B3Q15393 1217 aaKnown RBP11.73□□□□□ -0.53
COPS4-205ENST00000507376 ISCA1Q9BUE6 129 aa11.73□□□□□ -0.53
COPS4-205ENST00000507376 FKTNO75072 461 aa11.72□□□□□ -0.53
COPS4-205ENST00000507376 KLRK1P26718 216 aa11.72□□□□□ -0.53
COPS4-205ENST00000507376 OTOP1Q7RTM1 612 aa11.72□□□□□ -0.53
COPS4-205ENST00000507376 CLMNQ96JQ2 1002 aa11.72□□□□□ -0.53
COPS4-205ENST00000507376 TRIM17Q9Y577 477 aa11.72□□□□□ -0.53
COPS4-205ENST00000507376 PCDHAC2Q9Y5I4 1007 aa11.72□□□□□ -0.53
COPS4-205ENST00000507376 A0A1B0GUL6 1792 aa11.72□□□□□ -0.53
COPS4-205ENST00000507376 IGF2BP3O00425 579 aaKnown RBP eCLIP11.71□□□□□ -0.53
COPS4-205ENST00000507376 IRS4O14654 1257 aaPredicted RBP11.71□□□□□ -0.53
COPS4-205ENST00000507376 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
COPS4-205ENST00000507376 COLQQ9Y215 455 aaPredicted RBP11.71□□□□□ -0.53
COPS4-205ENST00000507376 MYCP01106 439 aaPredicted RBP11.7□□□□□ -0.54
COPS4-205ENST00000507376 USP17L8P0C7I0 530 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 TM4SF4P48230 202 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 RPS8P62241 208 aaKnown RBP11.7□□□□□ -0.54
COPS4-205ENST00000507376 PKN2Q16513 984 aaKnown RBP11.7□□□□□ -0.54
COPS4-205ENST00000507376 HSP90AB3PQ58FF7 597 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 TMC4Q7Z404 712 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 CD99L2Q8TCZ2 262 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 EYA3Q99504 573 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 ANKIB1Q9P2G1 1089 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 ECM29Q5VYK3 1845 aa11.7□□□□□ -0.54
COPS4-205ENST00000507376 PITPNM2Q9BZ72 1349 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 MYH3P11055 1940 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 WNT10BO00744 389 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 GJA5P36382 358 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 FKBP1BP68106 108 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 TXNRD3Q86VQ6 643 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 FBXW7Q969H0 707 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 ZC3H12CQ9C0D7 883 aaKnown RBP11.69□□□□□ -0.54
COPS4-205ENST00000507376 PODXL2Q9NZ53 605 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 GGA1Q9UJY5 639 aa11.69□□□□□ -0.54
COPS4-205ENST00000507376 RANBP2P49792 3224 aaKnown RBP11.69□□□□□ -0.54
COPS4-205ENST00000507376 MAPK8IP3Q9UPT6 1336 aa11.68□□□□□ -0.54
COPS4-205ENST00000507376 DACT2Q5SW24 774 aa11.68□□□□□ -0.54
COPS4-205ENST00000507376 SPRYD7Q5W111 196 aa11.68□□□□□ -0.54
COPS4-205ENST00000507376 CCDC146Q8IYE0 955 aa11.68□□□□□ -0.54
COPS4-205ENST00000507376 MIER1Q8N108 512 aa11.68□□□□□ -0.54
COPS4-205ENST00000507376 PLBD2Q8NHP8 589 aa11.68□□□□□ -0.54
COPS4-205ENST00000507376 GCC1Q96CN9 775 aa11.68□□□□□ -0.54
COPS4-205ENST00000507376 RIPK4P57078 832 aa11.67□□□□□ -0.54
COPS4-205ENST00000507376 HDGFL1Q5TGJ6 251 aa11.67□□□□□ -0.54
COPS4-205ENST00000507376 ANGEL1Q9UNK9 670 aaKnown RBP11.67□□□□□ -0.54
COPS4-205ENST00000507376 USP17L3A6NCW0 530 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 USP17L4A6NCW7 530 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 G3V3G9 751 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 CRHR2Q13324 411 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 NEUROD2Q15784 382 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 NOM1Q5C9Z4 860 aaKnown RBP11.66□□□□□ -0.54
COPS4-205ENST00000507376 DCAF8Q5TAQ9 597 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 ANKRD13DQ6ZTN6 518 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 USP17L1Q7RTZ2 530 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 IFNL1Q8IU54 200 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 CDAN1Q8IWY9 1227 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 CFHR5Q9BXR6 569 aa11.66□□□□□ -0.54
COPS4-205ENST00000507376 PHAXQ9H814 394 aaKnown RBP11.66□□□□□ -0.54
COPS4-205ENST00000507376 LAS1LQ9Y4W2 734 aaKnown RBP11.66□□□□□ -0.54
COPS4-205ENST00000507376 H0YGN5 161 aa11.65□□□□□ -0.54
COPS4-205ENST00000507376 SREBF2Q12772 1141 aa11.65□□□□□ -0.54
COPS4-205ENST00000507376 LDLRAD1Q5T700 205 aa11.65□□□□□ -0.54
COPS4-205ENST00000507376 KIAA0825Q8IV33 1275 aa11.65□□□□□ -0.54
COPS4-205ENST00000507376 WNK4Q96J92 1243 aa11.65□□□□□ -0.54
COPS4-205ENST00000507376 MYD88Q99836 296 aa11.65□□□□□ -0.54
COPS4-205ENST00000507376 ZBTB47Q9UFB7 747 aaPredicted RBP11.65□□□□□ -0.54
COPS4-205ENST00000507376 PTPN22Q9Y2R2 807 aa11.65□□□□□ -0.54
COPS4-205ENST00000507376 MED23Q9ULK4 1368 aa11.65□□□□□ -0.55
COPS4-205ENST00000507376 XDHP47989 1333 aa11.64□□□□□ -0.55
COPS4-205ENST00000507376 SNAP23O00161 211 aa11.64□□□□□ -0.55
COPS4-205ENST00000507376 TMPOP42166 694 aaKnown RBP11.64□□□□□ -0.55
COPS4-205ENST00000507376 ARMC5Q96C12 935 aa11.64□□□□□ -0.55
COPS4-205ENST00000507376 ZBED3Q96IU2 234 aaPredicted RBP11.64□□□□□ -0.55
COPS4-205ENST00000507376 PTPN18Q99952 460 aa11.64□□□□□ -0.55
COPS4-205ENST00000507376 CIZ1Q9ULV3 898 aaPredicted RBP11.64□□□□□ -0.55
COPS4-205ENST00000507376 PTCH2Q9Y6C5 1203 aa11.64□□□□□ -0.55
COPS4-205ENST00000507376 CLRN2A0PK11 232 aa11.63□□□□□ -0.55
COPS4-205ENST00000507376 NEFMP07197 916 aa11.63□□□□□ -0.55
COPS4-205ENST00000507376 CERS5Q8N5B7 392 aa11.63□□□□□ -0.55
COPS4-205ENST00000507376 ARHGAP39Q9C0H5 1083 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms