RNA–Protein interactions for RNA: ENST00000507355.5

POLR2J3-212, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-212ENST00000507355 PI4KAP2A4QPH2 592 aa17.23■□□□□ 0.35
POLR2J3-212ENST00000507355 USP17L8P0C7I0 530 aa17.23■□□□□ 0.35
POLR2J3-212ENST00000507355 PI4KAP1Q8N8J0 262 aa17.23■□□□□ 0.35
POLR2J3-212ENST00000507355 AGBL3Q8NEM8 1001 aa17.23■□□□□ 0.35
POLR2J3-212ENST00000507355 ZNF609O15014 1411 aa17.22■□□□□ 0.35
POLR2J3-212ENST00000507355 IGKV5-2P06315 115 aa17.22■□□□□ 0.35
POLR2J3-212ENST00000507355 ANKRD18AQ8IVF6 992 aa17.22■□□□□ 0.35
POLR2J3-212ENST00000507355 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
POLR2J3-212ENST00000507355 CCDC27Q2M243 656 aa17.21■□□□□ 0.35
POLR2J3-212ENST00000507355 WWC1Q8IX03 1113 aa17.21■□□□□ 0.35
POLR2J3-212ENST00000507355 GMLQ99445 158 aa17.21■□□□□ 0.35
POLR2J3-212ENST00000507355 STK31Q9BXU1 1019 aa17.21■□□□□ 0.35
POLR2J3-212ENST00000507355 GPR25O00155 361 aa17.2■□□□□ 0.34
POLR2J3-212ENST00000507355 NEXNQ0ZGT2 675 aa17.2■□□□□ 0.34
POLR2J3-212ENST00000507355 FBXO46Q6PJ61 603 aaPredicted RBP17.2■□□□□ 0.34
POLR2J3-212ENST00000507355 G2E3Q7L622 706 aa17.2■□□□□ 0.34
POLR2J3-212ENST00000507355 TTLL11Q8NHH1 800 aa17.2■□□□□ 0.34
POLR2J3-212ENST00000507355 USP17L3A6NCW0 530 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 USP17L4A6NCW7 530 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 SLC4A2P04920 1241 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 CTSWP56202 376 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 CWF19L2Q2TBE0 894 aaKnown RBP17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 TWISTNBQ3B726 338 aaPredicted RBP17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 NBPF9Q3BBW0 867 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 USP17L1Q7RTZ2 530 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 FBXW7Q969H0 707 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 MXD3Q9BW11 206 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 XDHP47989 1333 aa17.19■□□□□ 0.34
POLR2J3-212ENST00000507355 WTIPA6NIX2 430 aaPredicted RBP17.18■□□□□ 0.34
POLR2J3-212ENST00000507355 PRKG1Q13976 671 aa17.18■□□□□ 0.34
POLR2J3-212ENST00000507355 CDC5LQ99459 802 aaKnown RBP17.18■□□□□ 0.34
POLR2J3-212ENST00000507355 SPEF2Q9C093 1822 aa17.18■□□□□ 0.34
POLR2J3-212ENST00000507355 NEURL1BA8MQ27 555 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 FKTNO75072 461 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 NF2P35240 595 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 TM4SF4P48230 202 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 SREBF2Q12772 1141 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 R3HDMLQ9H3Y0 253 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 GREM2Q9H772 168 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
POLR2J3-212ENST00000507355 H7C1W4 665 aa17.16■□□□□ 0.34
POLR2J3-212ENST00000507355 SASH1O94885 1247 aa17.16■□□□□ 0.34
POLR2J3-212ENST00000507355 PODNQ7Z5L7 613 aa17.16■□□□□ 0.34
POLR2J3-212ENST00000507355 IL16Q14005 1332 aa17.16■□□□□ 0.34
POLR2J3-212ENST00000507355 UBE3BQ7Z3V4 1068 aa17.15■□□□□ 0.34
POLR2J3-212ENST00000507355 OGFOD1Q8N543 542 aa17.15■□□□□ 0.34
POLR2J3-212ENST00000507355 GCC1Q96CN9 775 aa17.15■□□□□ 0.34
POLR2J3-212ENST00000507355 ZNF646O15015 1829 aaPredicted RBP17.14■□□□□ 0.34
POLR2J3-212ENST00000507355 HTTP42858 3142 aa17.14■□□□□ 0.34
POLR2J3-212ENST00000507355 WNT10BO00744 389 aa17.14■□□□□ 0.33
POLR2J3-212ENST00000507355 PTPN12Q05209 780 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-212ENST00000507355 NCBP3Q53F19 620 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-212ENST00000507355 NOM1Q5C9Z4 860 aaKnown RBP17.14■□□□□ 0.33
POLR2J3-212ENST00000507355 DACT2Q5SW24 774 aa17.14■□□□□ 0.33
POLR2J3-212ENST00000507355 SALL2Q9Y467 1007 aaPredicted RBP17.14■□□□□ 0.33
POLR2J3-212ENST00000507355 CCT4P50991 539 aaKnown RBP17.13■□□□□ 0.33
POLR2J3-212ENST00000507355 FLIIQ13045 1269 aa17.13■□□□□ 0.33
POLR2J3-212ENST00000507355 GCKRQ14397 625 aa17.13■□□□□ 0.33
POLR2J3-212ENST00000507355 ARMC9Q7Z3E5 817 aa17.13■□□□□ 0.33
POLR2J3-212ENST00000507355 MRS2Q9HD23 443 aa17.13■□□□□ 0.33
POLR2J3-212ENST00000507355 MED23Q9ULK4 1368 aa17.13■□□□□ 0.33
POLR2J3-212ENST00000507355 MKI67P46013 3256 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-212ENST00000507355 ANGEL1Q9UNK9 670 aaKnown RBP17.12■□□□□ 0.33
POLR2J3-212ENST00000507355 FZD1Q9UP38 647 aa17.12■□□□□ 0.33
POLR2J3-212ENST00000507355 VAMP4O75379 141 aa17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 IGHMBP2P38935 993 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 FKBP5Q13451 457 aaPredicted RBP17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 HABP4Q5JVS0 413 aaKnown RBP17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 SPRYD7Q5W111 196 aa17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 DNAAF4Q8WXU2 420 aa17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 LEMD3Q9Y2U8 911 aa17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 TRIM17Q9Y577 477 aa17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 MYH3P11055 1940 aa17.11■□□□□ 0.33
POLR2J3-212ENST00000507355 POTEFA5A3E0 1075 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 CSF1RP07333 972 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 ITGA6P23229 1130 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 CASP7P55210 303 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 TXNRD3Q86VQ6 643 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 APOBEC3FQ8IUX4 373 aaKnown RBP17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 WDR63Q8IWG1 891 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 CFHR5Q9BXR6 569 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 MYH16Q9H6N6 1097 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 MYO3BQ8WXR4 1341 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 FANCIQ9NVI1 1328 aa17.1■□□□□ 0.33
POLR2J3-212ENST00000507355 CENPFP49454 3210 aa17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 ANP32CO43423 234 aa17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 EXOSC9Q06265 439 aaKnown RBP17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 STRIP1Q5VSL9 837 aa17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 KIAA0825Q8IV33 1275 aa17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 LINS1Q8NG48 757 aa17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 MPHOSPH8Q99549 860 aa17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 COA1Q9GZY4 146 aa17.09■□□□□ 0.33
POLR2J3-212ENST00000507355 KIAA0100Q14667 2235 aaKnown RBP17.08■□□□□ 0.33
POLR2J3-212ENST00000507355 ZNF804BA4D1E1 1349 aa17.08■□□□□ 0.32
POLR2J3-212ENST00000507355 ALDH1A1P00352 501 aa17.08■□□□□ 0.32
POLR2J3-212ENST00000507355 OTOP1Q7RTM1 612 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms