RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 PSMD14O00487 310 aa24.77■■□□□ 1.56
SNX25-204ENST00000506896 KCNJ4P48050 445 aa24.77■■□□□ 1.56
SNX25-204ENST00000506896 RFX5P48382 616 aaPredicted RBP24.77■■□□□ 1.56
SNX25-204ENST00000506896 MVPQ14764 893 aaKnown RBP24.77■■□□□ 1.56
SNX25-204ENST00000506896 ADARB2Q9NS39 739 aaKnown RBP24.77■■□□□ 1.56
SNX25-204ENST00000506896 RIPOR2Q9Y4F9 1068 aa24.77■■□□□ 1.56
SNX25-204ENST00000506896 G3V3G9 751 aa24.76■■□□□ 1.55
SNX25-204ENST00000506896 PTPN12Q05209 780 aaKnown RBP24.76■■□□□ 1.55
SNX25-204ENST00000506896 DCAF8Q5TAQ9 597 aa24.76■■□□□ 1.55
SNX25-204ENST00000506896 CHMP4BQ9H444 224 aaKnown RBP24.76■■□□□ 1.55
SNX25-204ENST00000506896 DDX19BQ9UMR2 479 aa24.76■■□□□ 1.55
SNX25-204ENST00000506896 CNTROBQ8N137 903 aa24.75■■□□□ 1.55
SNX25-204ENST00000506896 DPF2Q92785 391 aa24.75■■□□□ 1.55
SNX25-204ENST00000506896 PUS3Q9BZE2 481 aaKnown RBP24.75■■□□□ 1.55
SNX25-204ENST00000506896 CNOT7Q9UIV1 285 aaKnown RBP24.75■■□□□ 1.55
SNX25-204ENST00000506896 EYA2O00167 538 aa24.74■■□□□ 1.55
SNX25-204ENST00000506896 SRGAP3O43295 1099 aa24.74■■□□□ 1.55
SNX25-204ENST00000506896 TAF5LO75529 589 aa24.74■■□□□ 1.55
SNX25-204ENST00000506896 VIL1P09327 827 aaKnown RBP24.74■■□□□ 1.55
SNX25-204ENST00000506896 MAP1SQ66K74 1059 aaPredicted RBP24.74■■□□□ 1.55
SNX25-204ENST00000506896 HELBQ8NG08 1087 aaPredicted RBP24.74■■□□□ 1.55
SNX25-204ENST00000506896 KLHDC4Q8TBB5 520 aa24.74■■□□□ 1.55
SNX25-204ENST00000506896 ZBTB12Q9Y330 459 aaPredicted RBP24.74■■□□□ 1.55
SNX25-204ENST00000506896 A0A1B0GUL6 1792 aa24.74■■□□□ 1.55
SNX25-204ENST00000506896 PSME4Q14997 1843 aa24.74■■□□□ 1.55
SNX25-204ENST00000506896 CIAO1O76071 339 aa24.73■■□□□ 1.55
SNX25-204ENST00000506896 LRRC24Q50LG9 513 aa24.73■■□□□ 1.55
SNX25-204ENST00000506896 KLRG1Q96E93 195 aa24.73■■□□□ 1.55
SNX25-204ENST00000506896 COPRSQ9NQ92 184 aa24.73■■□□□ 1.55
SNX25-204ENST00000506896 METTL24Q5JXM2 366 aa24.72■■□□□ 1.55
SNX25-204ENST00000506896 C15orf52Q6ZUT6 534 aaKnown RBP24.72■■□□□ 1.55
SNX25-204ENST00000506896 PGAP2Q9UHJ9 254 aa24.72■■□□□ 1.55
SNX25-204ENST00000506896 COG6Q9Y2V7 657 aa24.72■■□□□ 1.55
SNX25-204ENST00000506896 SHTN1A0MZ66 631 aa24.71■■□□□ 1.55
SNX25-204ENST00000506896 RPS12P25398 132 aaKnown RBP24.71■■□□□ 1.55
SNX25-204ENST00000506896 HIRAP54198 1017 aaPredicted RBP24.71■■□□□ 1.55
SNX25-204ENST00000506896 UBE4AQ14139 1066 aa24.71■■□□□ 1.55
SNX25-204ENST00000506896 PODNQ7Z5L7 613 aa24.71■■□□□ 1.55
SNX25-204ENST00000506896 COA1Q9GZY4 146 aa24.71■■□□□ 1.55
SNX25-204ENST00000506896 CREBZFQ9NS37 354 aa24.71■■□□□ 1.55
SNX25-204ENST00000506896 TXNRD3Q86VQ6 643 aa24.7■■□□□ 1.54
SNX25-204ENST00000506896 PCNTO95613 3336 aa24.69■■□□□ 1.54
SNX25-204ENST00000506896 H7C1D1 291 aa24.69■■□□□ 1.54
SNX25-204ENST00000506896 PDE8BO95263 885 aa24.69■■□□□ 1.54
SNX25-204ENST00000506896 IL15P40933 162 aaPredicted RBP24.69■■□□□ 1.54
SNX25-204ENST00000506896 MICALL2Q8IY33 904 aa24.69■■□□□ 1.54
SNX25-204ENST00000506896 RRP1P56182 461 aaKnown RBP24.68■■□□□ 1.54
SNX25-204ENST00000506896 ATP8B2P98198 1209 aa24.68■■□□□ 1.54
SNX25-204ENST00000506896 ATG9AQ7Z3C6 839 aa24.68■■□□□ 1.54
SNX25-204ENST00000506896 VGLL2Q8N8G2 317 aa24.68■■□□□ 1.54
SNX25-204ENST00000506896 JMYQ8N9B5 988 aa24.68■■□□□ 1.54
SNX25-204ENST00000506896 TRPM4Q8TD43 1214 aa24.68■■□□□ 1.54
SNX25-204ENST00000506896 SIL1Q9H173 461 aa24.68■■□□□ 1.54
SNX25-204ENST00000506896 IRS2Q9Y4H2 1338 aa24.67■■□□□ 1.54
SNX25-204ENST00000506896 PNMA6EA0A0J9YXQ4 647 aa24.67■■□□□ 1.54
SNX25-204ENST00000506896 C20orf194Q5TEA3 1177 aa24.67■■□□□ 1.54
SNX25-204ENST00000506896 ZC3H15Q8WU90 426 aaKnown RBP24.67■■□□□ 1.54
SNX25-204ENST00000506896 C1orf115Q9H7X2 142 aa24.67■■□□□ 1.54
SNX25-204ENST00000506896 ZBTB40Q9NUA8 1239 aa24.67■■□□□ 1.54
SNX25-204ENST00000506896 PA2G4Q9UQ80 394 aaKnown RBP24.67■■□□□ 1.54
SNX25-204ENST00000506896 ZNF609O15014 1411 aa24.67■■□□□ 1.54
SNX25-204ENST00000506896 POLR2AP24928 1970 aaKnown RBP24.66■■□□□ 1.54
SNX25-204ENST00000506896 SNAP23O00161 211 aa24.66■■□□□ 1.54
SNX25-204ENST00000506896 KLRK1P26718 216 aa24.66■■□□□ 1.54
SNX25-204ENST00000506896 POLA2Q14181 598 aa24.66■■□□□ 1.54
SNX25-204ENST00000506896 PUM3Q15397 648 aaKnown RBP24.66■■□□□ 1.54
SNX25-204ENST00000506896 RSBN1LQ6PCB5 846 aaPredicted RBP24.66■■□□□ 1.54
SNX25-204ENST00000506896 ZNF804AQ7Z570 1209 aa24.66■■□□□ 1.54
SNX25-204ENST00000506896 GMLQ99445 158 aa24.66■■□□□ 1.54
SNX25-204ENST00000506896 ZNF646O15015 1829 aaPredicted RBP24.65■■□□□ 1.54
SNX25-204ENST00000506896 USP17L3A6NCW0 530 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 USP17L4A6NCW7 530 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 TMEM88BA6NKF7 163 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 USP17L1Q7RTZ2 530 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 SAMD7Q7Z3H4 446 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 AGBL3Q8NEM8 1001 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 SSH3Q8TE77 659 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 CEP126Q9P2H0 1117 aa24.65■■□□□ 1.54
SNX25-204ENST00000506896 TRPM7Q96QT4 1865 aa24.64■■□□□ 1.54
SNX25-204ENST00000506896 EGFRP00533 1210 aa24.63■■□□□ 1.53
SNX25-204ENST00000506896 IFIT1P09914 478 aaKnown RBP24.63■■□□□ 1.53
SNX25-204ENST00000506896 FMR1Q06787 632 aaKnown RBP eCLIP24.63■■□□□ 1.53
SNX25-204ENST00000506896 CEP85Q6P2H3 762 aa24.63■■□□□ 1.53
SNX25-204ENST00000506896 CD209Q9NNX6 404 aa24.63■■□□□ 1.53
SNX25-204ENST00000506896 LPIN2Q92539 896 aa24.62■■□□□ 1.53
SNX25-204ENST00000506896 IL1R1P14778 569 aa24.61■■□□□ 1.53
SNX25-204ENST00000506896 FGFR2P21802 821 aa24.61■■□□□ 1.53
SNX25-204ENST00000506896 ZNF280AP59817 542 aaPredicted RBP24.61■■□□□ 1.53
SNX25-204ENST00000506896 G3BP1Q13283 466 aaKnown RBP eCLIP24.61■■□□□ 1.53
SNX25-204ENST00000506896 TBC1D10BQ4KMP7 808 aaPredicted RBP24.61■■□□□ 1.53
SNX25-204ENST00000506896 CAVIN4Q5BKX8 364 aa24.61■■□□□ 1.53
SNX25-204ENST00000506896 DACT2Q5SW24 774 aa24.61■■□□□ 1.53
SNX25-204ENST00000506896 STRIP1Q5VSL9 837 aa24.61■■□□□ 1.53
SNX25-204ENST00000506896 RPAP2Q8IXW5 612 aaPredicted RBP24.61■■□□□ 1.53
SNX25-204ENST00000506896 TRAF5O00463 557 aa24.6■■□□□ 1.53
SNX25-204ENST00000506896 SLC5A1P13866 664 aa24.6■■□□□ 1.53
SNX25-204ENST00000506896 HIBADHP31937 336 aaKnown RBP24.6■■□□□ 1.53
SNX25-204ENST00000506896 CST9Q5W186 159 aa24.59■■□□□ 1.53
SNX25-204ENST00000506896 VPS37DQ86XT2 251 aa24.59■■□□□ 1.53
SNX25-204ENST00000506896 FAM84BQ96KN1 310 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms