RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 ZNF408Q9H9D4 720 aa13.63□□□□□ -0.23
SNCA-210ENST00000506691 C9orf78Q9NZ63 289 aaPredicted RBP13.63□□□□□ -0.23
SNCA-210ENST00000506691 UTYO14607 1347 aa13.63□□□□□ -0.23
SNCA-210ENST00000506691 PITPNM2Q9BZ72 1349 aa13.63□□□□□ -0.23
SNCA-210ENST00000506691 PSME4Q14997 1843 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 GRM8O00222 908 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 PSMD14O00487 310 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 TNRC18O15417 2968 aaPredicted RBP13.62□□□□□ -0.23
SNCA-210ENST00000506691 GNAI3P08754 354 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 VIL1P09327 827 aaKnown RBP13.62□□□□□ -0.23
SNCA-210ENST00000506691 CTU1Q7Z7A3 348 aaKnown RBP13.62□□□□□ -0.23
SNCA-210ENST00000506691 SULF1Q8IWU6 871 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 AGBL3Q8NEM8 1001 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 RNF186Q9NXI6 227 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 PAPPA2Q9BXP8 1791 aa13.62□□□□□ -0.23
SNCA-210ENST00000506691 PDE8AO60658 829 aa13.61□□□□□ -0.23
SNCA-210ENST00000506691 HCLS1P14317 486 aaPredicted RBP13.61□□□□□ -0.23
SNCA-210ENST00000506691 ZNF157P51786 506 aaPredicted RBP13.61□□□□□ -0.23
SNCA-210ENST00000506691 ZNF280AP59817 542 aaPredicted RBP13.61□□□□□ -0.23
SNCA-210ENST00000506691 KIF23Q02241 960 aaPredicted RBP13.61□□□□□ -0.23
SNCA-210ENST00000506691 SLC51AQ86UW1 340 aa13.61□□□□□ -0.23
SNCA-210ENST00000506691 PLA2G12BQ9BX93 195 aa13.61□□□□□ -0.23
SNCA-210ENST00000506691 NSFL1CQ9UNZ2 370 aaKnown RBP13.61□□□□□ -0.23
SNCA-210ENST00000506691 POLR2AP24928 1970 aaKnown RBP13.6□□□□□ -0.23
SNCA-210ENST00000506691 IRS4O14654 1257 aaPredicted RBP13.6□□□□□ -0.23
SNCA-210ENST00000506691 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
SNCA-210ENST00000506691 SAMD7Q7Z3H4 446 aa13.6□□□□□ -0.23
SNCA-210ENST00000506691 CLUAP1Q96AJ1 413 aa13.6□□□□□ -0.23
SNCA-210ENST00000506691 FAM89AQ96GI7 184 aa13.6□□□□□ -0.23
SNCA-210ENST00000506691 ZIC5Q96T25 663 aa13.6□□□□□ -0.23
SNCA-210ENST00000506691 CFHR5Q9BXR6 569 aa13.6□□□□□ -0.23
SNCA-210ENST00000506691 RTL9Q8NET4 1388 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 ECE2O60344 883 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 AAMPQ13685 434 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 KIF4BQ2VIQ3 1234 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 CSRNP1Q96S65 589 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 ZC3H12CQ9C0D7 883 aaKnown RBP13.59□□□□□ -0.23
SNCA-210ENST00000506691 USP44Q9H0E7 712 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 POLLQ9UGP5 575 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 DDX19BQ9UMR2 479 aa13.59□□□□□ -0.23
SNCA-210ENST00000506691 ZBTB12Q9Y330 459 aaPredicted RBP13.59□□□□□ -0.23
SNCA-210ENST00000506691 CASP7P55210 303 aa13.58□□□□□ -0.24
SNCA-210ENST00000506691 RPS8P62241 208 aaKnown RBP13.58□□□□□ -0.24
SNCA-210ENST00000506691 TBC1D10BQ4KMP7 808 aaPredicted RBP13.58□□□□□ -0.24
SNCA-210ENST00000506691 UBE3BQ7Z3V4 1068 aa13.58□□□□□ -0.24
SNCA-210ENST00000506691 TMEM57Q8N5G2 664 aa13.58□□□□□ -0.24
SNCA-210ENST00000506691 TBC1D16Q8TBP0 767 aa13.58□□□□□ -0.24
SNCA-210ENST00000506691 DBNDD1Q9H9R9 158 aa13.58□□□□□ -0.24
SNCA-210ENST00000506691 TAF1P21675 1872 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 C6orf229H3BNL8 230 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 PLIN1O60240 522 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 TRPA1O75762 1119 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 UBTFL1P0CB47 393 aaPredicted RBP13.57□□□□□ -0.24
SNCA-210ENST00000506691 MVPQ14764 893 aaKnown RBP13.57□□□□□ -0.24
SNCA-210ENST00000506691 CCDC152Q4G0S7 254 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 PODNQ7Z5L7 613 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 ITPRIPQ8IWB1 547 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 CELF1Q92879 486 aaKnown RBP13.57□□□□□ -0.24
SNCA-210ENST00000506691 GGA3Q9NZ52 723 aa13.57□□□□□ -0.24
SNCA-210ENST00000506691 SCN9AQ15858 1988 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 SHTN1A0MZ66 631 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 ZBTB7BO15156 539 aaPredicted RBP13.56□□□□□ -0.24
SNCA-210ENST00000506691 EGFRP00533 1210 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 CSF1RP07333 972 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 GPSM2P81274 684 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 RSBN1LQ6PCB5 846 aaPredicted RBP13.56□□□□□ -0.24
SNCA-210ENST00000506691 GCC1Q96CN9 775 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 CDCA5Q96FF9 252 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 GMLQ99445 158 aa13.56□□□□□ -0.24
SNCA-210ENST00000506691 SUPT16HQ9Y5B9 1047 aaKnown RBP13.56□□□□□ -0.24
SNCA-210ENST00000506691 ADM5C9JUS6 153 aa13.55□□□□□ -0.24
SNCA-210ENST00000506691 GNAI2P04899 355 aa13.55□□□□□ -0.24
SNCA-210ENST00000506691 NBPF7P0C2Y1 421 aaPredicted RBP13.55□□□□□ -0.24
SNCA-210ENST00000506691 RLBP1P12271 317 aa13.55□□□□□ -0.24
SNCA-210ENST00000506691 TM4SF4P48230 202 aa13.55□□□□□ -0.24
SNCA-210ENST00000506691 RASAL3Q86YV0 1011 aa13.55□□□□□ -0.24
SNCA-210ENST00000506691 PANK1Q8TE04 598 aa13.55□□□□□ -0.24
SNCA-210ENST00000506691 MYO3BQ8WXR4 1341 aa13.55□□□□□ -0.24
SNCA-210ENST00000506691 USP17L8P0C7I0 530 aa13.54□□□□□ -0.24
SNCA-210ENST00000506691 CTSWP56202 376 aa13.54□□□□□ -0.24
SNCA-210ENST00000506691 RABL6Q3YEC7 729 aaPredicted RBP13.54□□□□□ -0.24
SNCA-210ENST00000506691 RTL5Q5HYW3 569 aaPredicted RBP13.54□□□□□ -0.24
SNCA-210ENST00000506691 TTLL11Q8NHH1 800 aa13.54□□□□□ -0.24
SNCA-210ENST00000506691 GGA1Q9UJY5 639 aa13.54□□□□□ -0.24
SNCA-210ENST00000506691 LAMB1P07942 1786 aa13.53□□□□□ -0.24
SNCA-210ENST00000506691 UNCXA6NJT0 531 aa13.53□□□□□ -0.24
SNCA-210ENST00000506691 FOXO4P98177 505 aa13.53□□□□□ -0.24
SNCA-210ENST00000506691 CDC5LQ99459 802 aaKnown RBP13.53□□□□□ -0.24
SNCA-210ENST00000506691 HPS5Q9UPZ3 1129 aa13.53□□□□□ -0.24
SNCA-210ENST00000506691 TNNQ9UQP3 1299 aa13.53□□□□□ -0.24
SNCA-210ENST00000506691 COG6Q9Y2V7 657 aa13.53□□□□□ -0.24
SNCA-210ENST00000506691 XDHP47989 1333 aa13.53□□□□□ -0.24
SNCA-210ENST00000506691 RIMBP2O15034 1052 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 ALDH1A1P00352 501 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 SREBF2Q12772 1141 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 SCARF1Q14162 830 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 CCDC57Q2TAC2 916 aa13.52□□□□□ -0.25
SNCA-210ENST00000506691 ANGEL2Q5VTE6 544 aaKnown RBP13.52□□□□□ -0.25
SNCA-210ENST00000506691 FBXO46Q6PJ61 603 aaPredicted RBP13.52□□□□□ -0.25
SNCA-210ENST00000506691 SUCLG2Q96I99 432 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms