RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 KIAA1468Q9P260 1216 aa19.88■□□□□ 0.77
SQSTM1-211ENST00000506690 FANCGO15287 622 aa19.88■□□□□ 0.77
SQSTM1-211ENST00000506690 ANXA1P04083 346 aa19.88■□□□□ 0.77
SQSTM1-211ENST00000506690 GORABQ5T7V8 394 aa19.88■□□□□ 0.77
SQSTM1-211ENST00000506690 ILDR1Q86SU0 546 aaPredicted RBP19.88■□□□□ 0.77
SQSTM1-211ENST00000506690 NEDD4P46934 1319 aa19.88■□□□□ 0.77
SQSTM1-211ENST00000506690 ST5P78524 1137 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 G3BP1Q13283 466 aaKnown RBP eCLIP19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 NFATC2IPQ8NCF5 419 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 SMARCE1Q969G3 411 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 SDF4Q9BRK5 362 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 SETD1BQ9UPS6 1966 aaKnown RBP19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 TBC1D8O95759 1140 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 LRRFIP1Q32MZ4 808 aaKnown RBP19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 ADALQ6DHV7 355 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 MNS1Q8NEH6 495 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 PCDHA7Q9UN72 937 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 PIK3C2AO00443 1686 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 NCAPD2Q15021 1401 aa19.87■□□□□ 0.77
SQSTM1-211ENST00000506690 A0A1W2PQ27 194 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 A0A1W2PQ64 194 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 A0A1W2PQD8 194 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 SASH3O75995 380 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 SEC31AO94979 1220 aaKnown RBP19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 HOXC9P31274 260 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 NCAPHQ15003 741 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 KAZALD1Q96I82 304 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 MAP3K2Q9Y2U5 619 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 PTPDC1A2A3K4 754 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 CYP21A2P08686 494 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 PARP3Q9Y6F1 533 aa19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 U3KPZ7 1027 aaPredicted RBP19.86■□□□□ 0.77
SQSTM1-211ENST00000506690 ZNF142P52746 1687 aaPredicted RBP19.85■□□□□ 0.77
SQSTM1-211ENST00000506690 TMX1Q9H3N1 280 aa19.85■□□□□ 0.77
SQSTM1-211ENST00000506690 SALL1Q9NSC2 1324 aa19.85■□□□□ 0.77
SQSTM1-211ENST00000506690 MRC1P22897 1456 aa19.85■□□□□ 0.77
SQSTM1-211ENST00000506690 LAMA4Q16363 1823 aa19.85■□□□□ 0.77
SQSTM1-211ENST00000506690 PSME1Q06323 249 aa19.85■□□□□ 0.77
SQSTM1-211ENST00000506690 CARD6Q9BX69 1037 aa19.85■□□□□ 0.77
SQSTM1-211ENST00000506690 A0A1B0GVL5 298 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 OAS2P29728 719 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 NDUFA8P51970 172 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 FOSBP53539 338 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 CC2D1AQ6P1N0 951 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 KRBA2Q6ZNG9 492 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 REXO1L1PQ8IX06 675 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 LRRC2Q9BYS8 371 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 RTEL1Q9NZ71 1219 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 UTYO14607 1347 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 URI1O94763 535 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 GPS2Q13227 327 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 MAPK8IP2Q13387 824 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 CWF19L2Q2TBE0 894 aaKnown RBP19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 SUCLG2Q96I99 432 aa19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 DBF4Q9UBU7 674 aaPredicted RBP19.84■□□□□ 0.77
SQSTM1-211ENST00000506690 KCNQ3O43525 872 aa19.83■□□□□ 0.77
SQSTM1-211ENST00000506690 SMC1AQ14683 1233 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-211ENST00000506690 ZRSR1Q15695 479 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-211ENST00000506690 KSR2Q6VAB6 950 aa19.83■□□□□ 0.77
SQSTM1-211ENST00000506690 EDC3Q96F86 508 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-211ENST00000506690 BICC1Q9H694 974 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-211ENST00000506690 ZCCHC17Q9NP64 241 aaKnown RBP19.83■□□□□ 0.77
SQSTM1-211ENST00000506690 KCNA6P17658 529 aa19.83■□□□□ 0.76
SQSTM1-211ENST00000506690 EVCP57679 992 aa19.83■□□□□ 0.76
SQSTM1-211ENST00000506690 NLRP12P59046 1061 aa19.83■□□□□ 0.76
SQSTM1-211ENST00000506690 FANCCQ00597 558 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 STOX1Q6ZVD7 989 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 ANKLE2Q86XL3 938 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 PLCD3Q8N3E9 789 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 GPR161Q8N6U8 529 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 AGXT2Q9BYV1 514 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 RFX7Q2KHR2 1363 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 GRM8O00222 908 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 IKBKBO14920 756 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 HMGB1P09429 215 aaKnown RBP19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 ZSCAN26Q16670 478 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 FCHSD1Q86WN1 690 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 HSD3B7Q9H2F3 369 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 LGR6Q9HBX8 967 aa19.82■□□□□ 0.76
SQSTM1-211ENST00000506690 ZNF609O15014 1411 aa19.81■□□□□ 0.76
SQSTM1-211ENST00000506690 DHX32Q7L7V1 743 aaKnown RBP19.81■□□□□ 0.76
SQSTM1-211ENST00000506690 LINC00301Q8NCQ3 95 aa19.81■□□□□ 0.76
SQSTM1-211ENST00000506690 FMNL2Q96PY5 1086 aa19.81■□□□□ 0.76
SQSTM1-211ENST00000506690 SEC62Q99442 399 aaKnown RBP19.81■□□□□ 0.76
SQSTM1-211ENST00000506690 MPHOSPH8Q99549 860 aa19.81■□□□□ 0.76
SQSTM1-211ENST00000506690 SIL1Q9H173 461 aa19.81■□□□□ 0.76
SQSTM1-211ENST00000506690 APOBRQ0VD83 1088 aa19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 EPC1Q9H2F5 836 aa19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 PSD3Q9NYI0 1048 aa19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 SLC3A2P08195 630 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 ATP5JP18859 108 aa19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 MAP3K9P80192 1104 aa19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 CCDC129Q6ZRS4 1044 aa19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 RASSF4Q9H2L5 321 aa19.8■□□□□ 0.76
SQSTM1-211ENST00000506690 MARF1Q9Y4F3 1742 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-211ENST00000506690 VWA3AA6NCI4 1184 aa19.79■□□□□ 0.76
SQSTM1-211ENST00000506690 LMOD1P29536 600 aaPredicted RBP19.79■□□□□ 0.76
SQSTM1-211ENST00000506690 EXOSC10Q01780 885 aaKnown RBP19.79■□□□□ 0.76
SQSTM1-211ENST00000506690 GUCY1B3Q02153 619 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms