RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 SNAP23O00161 211 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 SRGAP3O43295 1099 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 HMMRO75330 724 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 KLRK1P26718 216 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 KCNJ4P48050 445 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 RFX5P48382 616 aaPredicted RBP18.37■□□□□ 0.53
DSP-203ENST00000506617 SCNN1DP51172 638 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 DCAF8Q5TAQ9 597 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 EXOC6Q8TAG9 804 aa18.37■□□□□ 0.53
DSP-203ENST00000506617 TAF1DQ9H5J8 278 aaPredicted RBP18.37■□□□□ 0.53
DSP-203ENST00000506617 TNIP1Q15025 636 aa18.36■□□□□ 0.53
DSP-203ENST00000506617 TXNRD3Q86VQ6 643 aa18.36■□□□□ 0.53
DSP-203ENST00000506617 KCNQ5Q9NR82 932 aa18.36■□□□□ 0.53
DSP-203ENST00000506617 PSMD14O00487 310 aa18.35■□□□□ 0.53
DSP-203ENST00000506617 CIAO1O76071 339 aa18.35■□□□□ 0.53
DSP-203ENST00000506617 POTEIP0CG38 1075 aa18.35■□□□□ 0.53
DSP-203ENST00000506617 POTEJP0CG39 1038 aa18.35■□□□□ 0.53
DSP-203ENST00000506617 LMOD1P29536 600 aaPredicted RBP18.35■□□□□ 0.53
DSP-203ENST00000506617 EPHX2P34913 555 aa18.35■□□□□ 0.53
DSP-203ENST00000506617 GMPSP49915 693 aaPredicted RBP18.35■□□□□ 0.53
DSP-203ENST00000506617 PTPN12Q05209 780 aaKnown RBP18.35■□□□□ 0.53
DSP-203ENST00000506617 LRRC24Q50LG9 513 aa18.35■□□□□ 0.53
DSP-203ENST00000506617 C1orf115Q9H7X2 142 aa18.35■□□□□ 0.53
DSP-203ENST00000506617 IRS2Q9Y4H2 1338 aa18.34■□□□□ 0.53
DSP-203ENST00000506617 PNMA6EA0A0J9YXQ4 647 aa18.34■□□□□ 0.53
DSP-203ENST00000506617 SIRT2Q8IXJ6 389 aa18.34■□□□□ 0.53
DSP-203ENST00000506617 NOP58Q9Y2X3 529 aaKnown RBP18.34■□□□□ 0.53
DSP-203ENST00000506617 RIPOR2Q9Y4F9 1068 aa18.34■□□□□ 0.53
DSP-203ENST00000506617 MROH5Q6ZUA9 1318 aa18.33■□□□□ 0.53
DSP-203ENST00000506617 EPS15P42566 896 aa18.33■□□□□ 0.52
DSP-203ENST00000506617 HDAC1Q13547 482 aaPredicted RBP18.33■□□□□ 0.52
DSP-203ENST00000506617 EAPPQ56P03 285 aaPredicted RBP18.33■□□□□ 0.52
DSP-203ENST00000506617 SMC1BQ8NDV3 1235 aa18.33■□□□□ 0.52
DSP-203ENST00000506617 GPRC5DQ9NZD1 345 aa18.33■□□□□ 0.52
DSP-203ENST00000506617 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.52
DSP-203ENST00000506617 PCDHB15Q9Y5E8 787 aa18.33■□□□□ 0.52
DSP-203ENST00000506617 METTL24Q5JXM2 366 aa18.32■□□□□ 0.52
DSP-203ENST00000506617 PODNQ7Z5L7 613 aa18.32■□□□□ 0.52
DSP-203ENST00000506617 COA1Q9GZY4 146 aa18.32■□□□□ 0.52
DSP-203ENST00000506617 EYA2O00167 538 aa18.31■□□□□ 0.52
DSP-203ENST00000506617 FSTL1Q12841 308 aa18.31■□□□□ 0.52
DSP-203ENST00000506617 HSP90AB4PQ58FF6 505 aa18.31■□□□□ 0.52
DSP-203ENST00000506617 C15orf52Q6ZUT6 534 aaKnown RBP18.31■□□□□ 0.52
DSP-203ENST00000506617 PA2G4Q9UQ80 394 aaKnown RBP18.31■□□□□ 0.52
DSP-203ENST00000506617 SHTN1A0MZ66 631 aa18.3■□□□□ 0.52
DSP-203ENST00000506617 VIL1P09327 827 aaKnown RBP18.3■□□□□ 0.52
DSP-203ENST00000506617 IL15P40933 162 aaPredicted RBP18.3■□□□□ 0.52
DSP-203ENST00000506617 IRX6P78412 446 aaPredicted RBP18.3■□□□□ 0.52
DSP-203ENST00000506617 UBE4AQ14139 1066 aa18.3■□□□□ 0.52
DSP-203ENST00000506617 PNMA8AQ86V59 439 aaPredicted RBP18.3■□□□□ 0.52
DSP-203ENST00000506617 LDHDQ86WU2 507 aa18.3■□□□□ 0.52
DSP-203ENST00000506617 VGLL2Q8N8G2 317 aa18.3■□□□□ 0.52
DSP-203ENST00000506617 SIL1Q9H173 461 aa18.3■□□□□ 0.52
DSP-203ENST00000506617 ZNF609O15014 1411 aa18.3■□□□□ 0.52
DSP-203ENST00000506617 USP17L3A6NCW0 530 aa18.29■□□□□ 0.52
DSP-203ENST00000506617 USP17L4A6NCW7 530 aa18.29■□□□□ 0.52
DSP-203ENST00000506617 CHADLQ6NUI6 762 aa18.29■□□□□ 0.52
DSP-203ENST00000506617 USP17L1Q7RTZ2 530 aa18.29■□□□□ 0.52
DSP-203ENST00000506617 MICALL2Q8IY33 904 aa18.29■□□□□ 0.52
DSP-203ENST00000506617 RWDD1Q9H446 243 aaPredicted RBP18.29■□□□□ 0.52
DSP-203ENST00000506617 ADARB2Q9NS39 739 aaKnown RBP18.29■□□□□ 0.52
DSP-203ENST00000506617 MYH13Q9UKX3 1938 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 PDE8BO95263 885 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 HSPA6P17066 643 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 RPS12P25398 132 aaKnown RBP18.28■□□□□ 0.52
DSP-203ENST00000506617 RSBN1LQ6PCB5 846 aaPredicted RBP18.28■□□□□ 0.52
DSP-203ENST00000506617 ATG9AQ7Z3C6 839 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 ZNF804AQ7Z570 1209 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 ERC1Q8IUD2 1116 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 DPF2Q92785 391 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 FBXW7Q969H0 707 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 DCTPP1Q9H773 170 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 CD209Q9NNX6 404 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 CNOT7Q9UIV1 285 aaKnown RBP18.28■□□□□ 0.52
DSP-203ENST00000506617 CLEC11AQ9Y240 323 aa18.28■□□□□ 0.52
DSP-203ENST00000506617 ARAP2Q8WZ64 1704 aa18.27■□□□□ 0.52
DSP-203ENST00000506617 RAB11FIP3O75154 756 aa18.27■□□□□ 0.52
DSP-203ENST00000506617 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.52
DSP-203ENST00000506617 G3BP1Q13283 466 aaKnown RBP eCLIP18.27■□□□□ 0.523e-20■□□□□ 11.1
DSP-203ENST00000506617 USP50Q70EL3 339 aaPredicted RBP18.27■□□□□ 0.52
DSP-203ENST00000506617 TRPM4Q8TD43 1214 aa18.27■□□□□ 0.52
DSP-203ENST00000506617 DACT2Q5SW24 774 aa18.26■□□□□ 0.51
DSP-203ENST00000506617 AGBL3Q8NEM8 1001 aa18.26■□□□□ 0.51
DSP-203ENST00000506617 GCC1Q96CN9 775 aa18.26■□□□□ 0.51
DSP-203ENST00000506617 MXD3Q9BW11 206 aa18.26■□□□□ 0.51
DSP-203ENST00000506617 H7C1D1 291 aa18.25■□□□□ 0.51
DSP-203ENST00000506617 IL1R1P14778 569 aa18.25■□□□□ 0.51
DSP-203ENST00000506617 GYG1P46976 350 aa18.25■□□□□ 0.51
DSP-203ENST00000506617 GTF2IP78347 998 aa18.25■□□□□ 0.51
DSP-203ENST00000506617 PUM3Q15397 648 aaKnown RBP18.25■□□□□ 0.51
DSP-203ENST00000506617 STRIP1Q5VSL9 837 aa18.25■□□□□ 0.51
DSP-203ENST00000506617 GPR108Q9NPR9 543 aa18.25■□□□□ 0.51
DSP-203ENST00000506617 FGFR2P21802 821 aa18.24■□□□□ 0.51
DSP-203ENST00000506617 MAP1SQ66K74 1059 aaPredicted RBP18.24■□□□□ 0.51
DSP-203ENST00000506617 TTLL5Q6EMB2 1281 aa18.24■□□□□ 0.51
DSP-203ENST00000506617 SAMD7Q7Z3H4 446 aa18.24■□□□□ 0.51
DSP-203ENST00000506617 FAM84BQ96KN1 310 aaPredicted RBP18.24■□□□□ 0.51
DSP-203ENST00000506617 GMLQ99445 158 aa18.24■□□□□ 0.51
DSP-203ENST00000506617 CEP126Q9P2H0 1117 aa18.24■□□□□ 0.51
DSP-203ENST00000506617 POLR2AP24928 1970 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms