RNA–Protein interactions for RNA: ENST00000506611.1

TRIO-208, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 526 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-208ENST00000506611 MEGF10Q96KG7 1140 aa8.13□□□□□ -1.11
TRIO-208ENST00000506611 SPACA7Q96KW9 195 aa8.13□□□□□ -1.11
TRIO-208ENST00000506611 SH2B1Q9NRF2 756 aaPredicted RBP8.13□□□□□ -1.11
TRIO-208ENST00000506611 PPME1Q9Y570 386 aa8.13□□□□□ -1.11
TRIO-208ENST00000506611 ICMTO60725 284 aa8.12□□□□□ -1.11
TRIO-208ENST00000506611 SMNDC1O75940 238 aaKnown RBP eCLIP8.12□□□□□ -1.11
TRIO-208ENST00000506611 CES1P23141 567 aa8.12□□□□□ -1.11
TRIO-208ENST00000506611 DZANK1Q9NVP4 752 aa8.12□□□□□ -1.11
TRIO-208ENST00000506611 KCNK4Q9NYG8 393 aa8.12□□□□□ -1.11
TRIO-208ENST00000506611 WISP1O95388 367 aa8.11□□□□□ -1.11
TRIO-208ENST00000506611 PCSK2P16519 638 aa8.11□□□□□ -1.11
TRIO-208ENST00000506611 CDC25BP30305 580 aa8.11□□□□□ -1.11
TRIO-208ENST00000506611 TP53INP1Q96A56 240 aa8.11□□□□□ -1.11
TRIO-208ENST00000506611 CARD10Q9BWT7 1032 aa8.11□□□□□ -1.11
TRIO-208ENST00000506611 EGFL7Q9UHF1 273 aa8.11□□□□□ -1.11
TRIO-208ENST00000506611 F8W735 103 aaPredicted RBP8.1□□□□□ -1.11
TRIO-208ENST00000506611 CDC27P30260 824 aa8.1□□□□□ -1.11
TRIO-208ENST00000506611 ARHGAP4P98171 946 aa8.1□□□□□ -1.11
TRIO-208ENST00000506611 AAMPQ13685 434 aa8.1□□□□□ -1.11
TRIO-208ENST00000506611 CACTIN-AS1Q8N1I8 211 aa8.1□□□□□ -1.11
TRIO-208ENST00000506611 AGGF1Q8N302 714 aaeCLIP8.1□□□□□ -1.11
TRIO-208ENST00000506611 ADAM19Q9H013 955 aa8.1□□□□□ -1.11
TRIO-208ENST00000506611 SRA1Q9HD15 236 aaKnown RBP8.1□□□□□ -1.11
TRIO-208ENST00000506611 LATS2Q9NRM7 1088 aa8.1□□□□□ -1.11
TRIO-208ENST00000506611 MTMR7Q9Y216 660 aa8.1□□□□□ -1.11
TRIO-208ENST00000506611 H3BRB1 525 aa8.09□□□□□ -1.11
TRIO-208ENST00000506611 PRSS36Q5K4E3 855 aa8.09□□□□□ -1.11
TRIO-208ENST00000506611 PEAR1Q5VY43 1037 aaPredicted RBP8.09□□□□□ -1.11
TRIO-208ENST00000506611 TXNDC2Q86VQ3 553 aa8.09□□□□□ -1.11
TRIO-208ENST00000506611 MAP4K3Q8IVH8 894 aa8.09□□□□□ -1.11
TRIO-208ENST00000506611 TUT1Q9H6E5 874 aaKnown RBP8.09□□□□□ -1.11
TRIO-208ENST00000506611 DDX3YO15523 660 aaKnown RBP8.08□□□□□ -1.12
TRIO-208ENST00000506611 ADAM11O75078 769 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 H2AFB1P0C5Y9 115 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 H2AFB2P0C5Z0 115 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 Q6ZS46 218 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 DZIP1LQ8IYY4 767 aaKnown RBP8.08□□□□□ -1.12
TRIO-208ENST00000506611 TMEM130Q8N3G9 435 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 SNX29Q8TEQ0 813 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 FOXD4L4Q8WXT5 416 aaPredicted RBP8.08□□□□□ -1.12
TRIO-208ENST00000506611 ZKSCAN3Q9BRR0 538 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 MRPL18Q9H0U6 180 aaKnown RBP8.08□□□□□ -1.12
TRIO-208ENST00000506611 MUC3BQ9H195 1237 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 AKTIPQ9H8T0 292 aa8.08□□□□□ -1.12
TRIO-208ENST00000506611 PDE2AO00408 941 aaPredicted RBP8.07□□□□□ -1.12
TRIO-208ENST00000506611 FSCN2O14926 492 aa8.07□□□□□ -1.12
TRIO-208ENST00000506611 PHACTR2O75167 634 aa8.07□□□□□ -1.12
TRIO-208ENST00000506611 USP5P45974 858 aa8.07□□□□□ -1.12
TRIO-208ENST00000506611 HGSNATQ68CP4 663 aa8.07□□□□□ -1.12
TRIO-208ENST00000506611 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.07□□□□□ -1.12
TRIO-208ENST00000506611 PTPRAP18433 802 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 XP32Q5T750 250 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 ERICH6Q7L0X2 663 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 Q8N3U1 123 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 TMEM102Q8N9M5 508 aaPredicted RBP8.06□□□□□ -1.12
TRIO-208ENST00000506611 TTC16Q8NEE8 873 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 PMEPA1Q969W9 287 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 NXPE3Q969Y0 559 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 KLHDC7BQ96G42 594 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 OSMRQ99650 979 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 SOX13Q9UN79 622 aa8.06□□□□□ -1.12
TRIO-208ENST00000506611 POLR3DP05423 398 aaPredicted RBP8.05□□□□□ -1.12
TRIO-208ENST00000506611 CD68P34810 354 aaPredicted RBP8.05□□□□□ -1.12
TRIO-208ENST00000506611 EHHADHQ08426 723 aa8.05□□□□□ -1.12
TRIO-208ENST00000506611 B4GALNT3Q6L9W6 998 aa8.05□□□□□ -1.12
TRIO-208ENST00000506611 GLYCTKQ8IVS8 523 aa8.05□□□□□ -1.12
TRIO-208ENST00000506611 ZFYVE28Q9HCC9 887 aa8.05□□□□□ -1.12
TRIO-208ENST00000506611 H3BRJ5 948 aa8.04□□□□□ -1.12
TRIO-208ENST00000506611 IGHA2P01877 340 aa8.04□□□□□ -1.12
TRIO-208ENST00000506611 KIAA1211Q6ZU35 1233 aa8.04□□□□□ -1.12
TRIO-208ENST00000506611 VN1R5Q7Z5H4 357 aa8.04□□□□□ -1.12
TRIO-208ENST00000506611 UBASH3BQ8TF42 649 aa8.04□□□□□ -1.12
TRIO-208ENST00000506611 UBL7Q96S82 380 aaPredicted RBP8.04□□□□□ -1.12
TRIO-208ENST00000506611 ZMYM1Q5SVZ6 1142 aa8.03□□□□□ -1.12
TRIO-208ENST00000506611 USPL1Q5W0Q7 1092 aa8.03□□□□□ -1.12
TRIO-208ENST00000506611 SEC31BQ9NQW1 1179 aa8.03□□□□□ -1.12
TRIO-208ENST00000506611 AMOTL2Q9Y2J4 779 aa8.03□□□□□ -1.12
TRIO-208ENST00000506611 METTL12A8MUP2 240 aa8.02□□□□□ -1.13
TRIO-208ENST00000506611 EDN3P14138 238 aa8.02□□□□□ -1.13
TRIO-208ENST00000506611 PRR23CQ6ZRP0 262 aa8.02□□□□□ -1.13
TRIO-208ENST00000506611 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
TRIO-208ENST00000506611 KLHL23Q8NBE8 558 aa8.02□□□□□ -1.13
TRIO-208ENST00000506611 BHLHE41Q9C0J9 482 aaPredicted RBP8.02□□□□□ -1.13
TRIO-208ENST00000506611 GLB1P16278 677 aa8.01□□□□□ -1.13
TRIO-208ENST00000506611 PIP4K2BP78356 416 aa8.01□□□□□ -1.13
TRIO-208ENST00000506611 FAM129BQ96TA1 746 aa8.01□□□□□ -1.13
TRIO-208ENST00000506611 BRPF3Q9ULD4 1205 aa8.01□□□□□ -1.13
TRIO-208ENST00000506611 SOX1O00570 391 aaPredicted RBP8□□□□□ -1.13
TRIO-208ENST00000506611 ORC1Q13415 861 aa8□□□□□ -1.13
TRIO-208ENST00000506611 ARMC10Q8N2F6 343 aa8□□□□□ -1.13
TRIO-208ENST00000506611 DCAF11Q8TEB1 546 aa8□□□□□ -1.13
TRIO-208ENST00000506611 SLC7A3Q8WY07 619 aa8□□□□□ -1.13
TRIO-208ENST00000506611 BSNDQ8WZ55 320 aa8□□□□□ -1.13
TRIO-208ENST00000506611 GPR182O15218 404 aa7.99□□□□□ -1.13
TRIO-208ENST00000506611 NLRP12P59046 1061 aa7.99□□□□□ -1.13
TRIO-208ENST00000506611 DUOXA2Q1HG44 320 aa7.99□□□□□ -1.13
TRIO-208ENST00000506611 FAM117BQ6P1L5 589 aa7.99□□□□□ -1.13
TRIO-208ENST00000506611 GALNT12Q8IXK2 581 aa7.99□□□□□ -1.13
TRIO-208ENST00000506611 WNT8BQ93098 351 aa7.99□□□□□ -1.13
TRIO-208ENST00000506611 TCF12Q99081 682 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms