RNA–Protein interactions for RNA: ENST00000506542.1

SERF1B-204, Transcript of small EDRK-rich factor 1B, humanhuman

TSL 3 BASIC

Gene SERF1B, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SERF1B-204ENST00000506542 CHD1LQ86WJ1 897 aa17.16■□□□□ 0.34
SERF1B-204ENST00000506542 ZNRF3Q9ULT6 936 aa17.16■□□□□ 0.34
SERF1B-204ENST00000506542 ECE2O60344 883 aa17.15■□□□□ 0.34
SERF1B-204ENST00000506542 VEGFAP15692 232 aaPredicted RBP17.15■□□□□ 0.34
SERF1B-204ENST00000506542 RABL6Q3YEC7 729 aaPredicted RBP17.15■□□□□ 0.34
SERF1B-204ENST00000506542 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
SERF1B-204ENST00000506542 TAF7LQ5H9L4 462 aa17.14■□□□□ 0.33
SERF1B-204ENST00000506542 SSH3Q8TE77 659 aa17.14■□□□□ 0.33
SERF1B-204ENST00000506542 SCN4AP35499 1836 aa17.14■□□□□ 0.33
SERF1B-204ENST00000506542 PDE4AP27815 886 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 SCNN1DP51172 638 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 MTX1Q13505 466 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 ANKRD45Q5TZF3 282 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 LDHAL6AQ6ZMR3 332 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 GPC2Q8N158 579 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 ZC3H12CQ9C0D7 883 aaKnown RBP17.13■□□□□ 0.33
SERF1B-204ENST00000506542 LNPKQ9C0E8 428 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 ZBTB12Q9Y330 459 aaPredicted RBP17.13■□□□□ 0.33
SERF1B-204ENST00000506542 EPS15P42566 896 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 POLA2Q14181 598 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 C16orf71Q8IYS4 520 aaPredicted RBP17.13■□□□□ 0.33
SERF1B-204ENST00000506542 L3MBTL3Q96JM7 780 aaPredicted RBP17.13■□□□□ 0.33
SERF1B-204ENST00000506542 CNNM1Q9NRU3 951 aa17.13■□□□□ 0.33
SERF1B-204ENST00000506542 PSMD14O00487 310 aa17.12■□□□□ 0.33
SERF1B-204ENST00000506542 TOMM70O94826 608 aa17.12■□□□□ 0.33
SERF1B-204ENST00000506542 ATP2B4P23634 1241 aa17.12■□□□□ 0.33
SERF1B-204ENST00000506542 EYA3Q99504 573 aa17.12■□□□□ 0.33
SERF1B-204ENST00000506542 VPS33BQ9H267 617 aa17.12■□□□□ 0.33
SERF1B-204ENST00000506542 ZNF646O15015 1829 aaPredicted RBP17.11■□□□□ 0.33
SERF1B-204ENST00000506542 RFX5P48382 616 aaPredicted RBP17.11■□□□□ 0.33
SERF1B-204ENST00000506542 GMPSP49915 693 aaPredicted RBP17.11■□□□□ 0.33
SERF1B-204ENST00000506542 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
SERF1B-204ENST00000506542 TAF1DQ9H5J8 278 aaPredicted RBP17.11■□□□□ 0.33
SERF1B-204ENST00000506542 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
SERF1B-204ENST00000506542 PCNTO95613 3336 aa17.11■□□□□ 0.33
SERF1B-204ENST00000506542 SRGAP3O43295 1099 aa17.1■□□□□ 0.33
SERF1B-204ENST00000506542 EAPPQ56P03 285 aaPredicted RBP17.1■□□□□ 0.33
SERF1B-204ENST00000506542 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
SERF1B-204ENST00000506542 SIL1Q9H173 461 aa17.1■□□□□ 0.33
SERF1B-204ENST00000506542 PA2G4Q9UQ80 394 aaKnown RBP17.1■□□□□ 0.33
SERF1B-204ENST00000506542 PSME4Q14997 1843 aa17.1■□□□□ 0.33
SERF1B-204ENST00000506542 HACL1Q9UJ83 578 aa17.1■□□□□ 0.33
SERF1B-204ENST00000506542 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
SERF1B-204ENST00000506542 G3V3G9 751 aa17.09■□□□□ 0.33
SERF1B-204ENST00000506542 EPHX2P34913 555 aa17.09■□□□□ 0.33
SERF1B-204ENST00000506542 KCNJ4P48050 445 aa17.09■□□□□ 0.33
SERF1B-204ENST00000506542 DCAF8Q5TAQ9 597 aa17.09■□□□□ 0.33
SERF1B-204ENST00000506542 ANKRD2Q9GZV1 360 aa17.09■□□□□ 0.33
SERF1B-204ENST00000506542 IRS2Q9Y4H2 1338 aa17.09■□□□□ 0.33
SERF1B-204ENST00000506542 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
SERF1B-204ENST00000506542 HTRA3P83110 453 aa17.08■□□□□ 0.32
SERF1B-204ENST00000506542 PTPN12Q05209 780 aaKnown RBP17.08■□□□□ 0.32
SERF1B-204ENST00000506542 ZBTB47Q9UFB7 747 aaPredicted RBP17.08■□□□□ 0.32
SERF1B-204ENST00000506542 EXOC6BQ9Y2D4 811 aa17.08■□□□□ 0.32
SERF1B-204ENST00000506542 ADAMTSL1Q8N6G6 1762 aa17.08■□□□□ 0.32
SERF1B-204ENST00000506542 EGFRP00533 1210 aa17.07■□□□□ 0.32
SERF1B-204ENST00000506542 FBXW7Q969H0 707 aa17.07■□□□□ 0.32
SERF1B-204ENST00000506542 JAG2Q9Y219 1238 aa17.07■□□□□ 0.32
SERF1B-204ENST00000506542 LEMD3Q9Y2U8 911 aa17.07■□□□□ 0.32
SERF1B-204ENST00000506542 IQCA1LA6NCM1 817 aa17.07■□□□□ 0.32
SERF1B-204ENST00000506542 RBM46Q8TBY0 533 aaKnown RBP17.07■□□□□ 0.32
SERF1B-204ENST00000506542 BACH2Q9BYV9 841 aa17.07■□□□□ 0.32
SERF1B-204ENST00000506542 GPRC5DQ9NZD1 345 aa17.07■□□□□ 0.32
SERF1B-204ENST00000506542 TNIP1Q15025 636 aa17.06■□□□□ 0.32
SERF1B-204ENST00000506542 NOP58Q9Y2X3 529 aaKnown RBP17.06■□□□□ 0.32
SERF1B-204ENST00000506542 APBB1O00213 710 aa17.05■□□□□ 0.32
SERF1B-204ENST00000506542 SURF6O75683 361 aaKnown RBP17.05■□□□□ 0.32
SERF1B-204ENST00000506542 LMOD1P29536 600 aaPredicted RBP17.05■□□□□ 0.32
SERF1B-204ENST00000506542 GYG1P46976 350 aa17.05■□□□□ 0.32
SERF1B-204ENST00000506542 METTL24Q5JXM2 366 aa17.05■□□□□ 0.32
SERF1B-204ENST00000506542 ATG9AQ7Z3C6 839 aa17.05■□□□□ 0.32
SERF1B-204ENST00000506542 TRPM4Q8TD43 1214 aa17.05■□□□□ 0.32
SERF1B-204ENST00000506542 LRRCC1Q9C099 1032 aa17.05■□□□□ 0.32
SERF1B-204ENST00000506542 CLEC11AQ9Y240 323 aa17.05■□□□□ 0.32
SERF1B-204ENST00000506542 SMARCA5O60264 1052 aaPredicted RBP17.04■□□□□ 0.32
SERF1B-204ENST00000506542 RAB11FIP3O75154 756 aa17.04■□□□□ 0.32
SERF1B-204ENST00000506542 FMR1Q06787 632 aaKnown RBP eCLIP17.04■□□□□ 0.32
SERF1B-204ENST00000506542 C8orf34Q49A92 452 aa17.04■□□□□ 0.32
SERF1B-204ENST00000506542 MAP1SQ66K74 1059 aaPredicted RBP17.04■□□□□ 0.32
SERF1B-204ENST00000506542 SAMD7Q7Z3H4 446 aa17.04■□□□□ 0.32
SERF1B-204ENST00000506542 MICALL2Q8IY33 904 aa17.04■□□□□ 0.32
SERF1B-204ENST00000506542 VGLL2Q8N8G2 317 aa17.04■□□□□ 0.32
SERF1B-204ENST00000506542 CNOT7Q9UIV1 285 aaKnown RBP17.04■□□□□ 0.32
SERF1B-204ENST00000506542 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.04■□□□□ 0.32
SERF1B-204ENST00000506542 HIRAP54198 1017 aaPredicted RBP17.04■□□□□ 0.32
SERF1B-204ENST00000506542 HSP90AB4PQ58FF6 505 aa17.04■□□□□ 0.32
SERF1B-204ENST00000506542 SMC1BQ8NDV3 1235 aa17.04■□□□□ 0.32
SERF1B-204ENST00000506542 IQSEC3Q9UPP2 1182 aaPredicted RBP17.04■□□□□ 0.32
SERF1B-204ENST00000506542 EYA2O00167 538 aa17.03■□□□□ 0.32
SERF1B-204ENST00000506542 VIL1P09327 827 aaKnown RBP17.03■□□□□ 0.32
SERF1B-204ENST00000506542 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
SERF1B-204ENST00000506542 PLEKHM2Q8IWE5 1019 aa17.03■□□□□ 0.32
SERF1B-204ENST00000506542 CD209Q9NNX6 404 aa17.03■□□□□ 0.32
SERF1B-204ENST00000506542 RBM19Q9Y4C8 960 aaKnown RBP17.03■□□□□ 0.32
SERF1B-204ENST00000506542 POLR2AP24928 1970 aaKnown RBP17.03■□□□□ 0.32
SERF1B-204ENST00000506542 MROH5Q6ZUA9 1318 aa17.02■□□□□ 0.32
SERF1B-204ENST00000506542 GTF2IP78347 998 aa17.02■□□□□ 0.32
SERF1B-204ENST00000506542 TBC1D10BQ4KMP7 808 aaPredicted RBP17.02■□□□□ 0.32
SERF1B-204ENST00000506542 CHADLQ6NUI6 762 aa17.02■□□□□ 0.32
SERF1B-204ENST00000506542 DLK2Q6UY11 383 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms