RNA–Protein interactions for RNA: ENST00000506388.2

RCN1-202, Transcript of reticulocalbin 1, humanhuman

TSL 1 (best)

Gene RCN1, Length 1,658 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCN1-202ENST00000506388 MX1P20591 662 aa16.37■□□□□ 0.21
RCN1-202ENST00000506388 DPP8Q6V1X1 898 aaPredicted RBP16.37■□□□□ 0.21
RCN1-202ENST00000506388 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.37■□□□□ 0.21
RCN1-202ENST00000506388 XAGE2Q96GT9 111 aa16.37■□□□□ 0.21
RCN1-202ENST00000506388 POLLQ9UGP5 575 aa16.37■□□□□ 0.21
RCN1-202ENST00000506388 LTBP3Q9NS15 1303 aa16.36■□□□□ 0.21
RCN1-202ENST00000506388 C21orf2O43822 256 aa16.36■□□□□ 0.21
RCN1-202ENST00000506388 PDE1AP54750 535 aa16.36■□□□□ 0.21
RCN1-202ENST00000506388 C16orf71Q8IYS4 520 aaPredicted RBP16.36■□□□□ 0.21
RCN1-202ENST00000506388 KLHL34Q8N239 644 aa16.36■□□□□ 0.21
RCN1-202ENST00000506388 GPATCH3Q96I76 525 aa16.36■□□□□ 0.21
RCN1-202ENST00000506388 ECHDC1Q9NTX5 307 aa16.36■□□□□ 0.21
RCN1-202ENST00000506388 AKAP11Q9UKA4 1901 aa16.36■□□□□ 0.21
RCN1-202ENST00000506388 KCNJ4P48050 445 aa16.35■□□□□ 0.21
RCN1-202ENST00000506388 FBXO33Q7Z6M2 555 aa16.35■□□□□ 0.21
RCN1-202ENST00000506388 NEUROD6Q96NK8 337 aa16.35■□□□□ 0.21
RCN1-202ENST00000506388 DBNDD2Q9BQY9 259 aa16.35■□□□□ 0.21
RCN1-202ENST00000506388 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
RCN1-202ENST00000506388 UFL1O94874 794 aa16.34■□□□□ 0.21
RCN1-202ENST00000506388 ATP5JP18859 108 aa16.34■□□□□ 0.21
RCN1-202ENST00000506388 CCDC158Q5M9N0 1113 aa16.34■□□□□ 0.21
RCN1-202ENST00000506388 EYA3Q99504 573 aa16.34■□□□□ 0.21
RCN1-202ENST00000506388 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
RCN1-202ENST00000506388 SEMA3EO15041 775 aa16.34■□□□□ 0.21
RCN1-202ENST00000506388 ARID4AP29374 1257 aaPredicted RBP16.34■□□□□ 0.21
RCN1-202ENST00000506388 CAVIN4Q5BKX8 364 aa16.34■□□□□ 0.21
RCN1-202ENST00000506388 OLFM4Q6UX06 510 aa16.34■□□□□ 0.21
RCN1-202ENST00000506388 OTUD7AQ8TE49 926 aaPredicted RBP16.34■□□□□ 0.21
RCN1-202ENST00000506388 FAM84BQ96KN1 310 aaPredicted RBP16.34■□□□□ 0.21
RCN1-202ENST00000506388 TLR7Q9NYK1 1049 aaKnown RBP16.34■□□□□ 0.21
RCN1-202ENST00000506388 PDS5AQ29RF7 1337 aaKnown RBP16.33■□□□□ 0.21
RCN1-202ENST00000506388 MYH13Q9UKX3 1938 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 GOLGB1Q14789 3259 aaKnown RBP16.33■□□□□ 0.2
RCN1-202ENST00000506388 SNAP23O00161 211 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 ERC2O15083 957 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 GLRX3O76003 335 aaKnown RBP16.33■□□□□ 0.2
RCN1-202ENST00000506388 UQCRFS1P1P0C7P4 283 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 FKBP4Q02790 459 aaKnown RBP eCLIP16.33■□□□□ 0.2
RCN1-202ENST00000506388 CCDC102BQ68D86 513 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 SLC51AQ86UW1 340 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 TICAM2Q86XR7 235 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 PI4K2BQ8TCG2 481 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 BCS1LQ9Y276 419 aa16.33■□□□□ 0.2
RCN1-202ENST00000506388 WTIPA6NIX2 430 aaPredicted RBP16.32■□□□□ 0.2
RCN1-202ENST00000506388 ADORA1P30542 326 aa16.32■□□□□ 0.2
RCN1-202ENST00000506388 C6orf229H3BNL8 230 aa16.31■□□□□ 0.2
RCN1-202ENST00000506388 IGSF3O75054 1194 aa16.31■□□□□ 0.2
RCN1-202ENST00000506388 HIBADHP31937 336 aaKnown RBP16.31■□□□□ 0.2
RCN1-202ENST00000506388 KIAA2012Q0VF49 1180 aa16.31■□□□□ 0.2
RCN1-202ENST00000506388 WASHC4Q2M389 1173 aa16.31■□□□□ 0.2
RCN1-202ENST00000506388 GORABQ5T7V8 394 aa16.31■□□□□ 0.2
RCN1-202ENST00000506388 ZC3H12CQ9C0D7 883 aaKnown RBP16.31■□□□□ 0.2
RCN1-202ENST00000506388 GNL3LQ9NVN8 582 aaKnown RBP16.31■□□□□ 0.2
RCN1-202ENST00000506388 DICER1Q9UPY3 1922 aaKnown RBP16.31■□□□□ 0.2
RCN1-202ENST00000506388 IL1R1P14778 569 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 PSME4Q14997 1843 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 ZNF804AQ7Z570 1209 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 TXNRD3Q86VQ6 643 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 COA1Q9GZY4 146 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 CHD4Q14839 1912 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 SBF1O95248 1867 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 KLRK1P26718 216 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 PHKA1P46020 1223 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 TDRD7Q8NHU6 1098 aaKnown RBP16.3■□□□□ 0.2
RCN1-202ENST00000506388 TAOK3Q9H2K8 898 aa16.3■□□□□ 0.2
RCN1-202ENST00000506388 NFKBIEO00221 500 aa16.29■□□□□ 0.2
RCN1-202ENST00000506388 BCAMP50895 628 aa16.29■□□□□ 0.2
RCN1-202ENST00000506388 BMP2KLQ5H9B9 411 aa16.29■□□□□ 0.2
RCN1-202ENST00000506388 PODNQ7Z5L7 613 aa16.29■□□□□ 0.2
RCN1-202ENST00000506388 HAUS7Q99871 368 aa16.29■□□□□ 0.2
RCN1-202ENST00000506388 GYG1P46976 350 aa16.28■□□□□ 0.2
RCN1-202ENST00000506388 TTC39AQ5SRH9 613 aa16.28■□□□□ 0.2
RCN1-202ENST00000506388 TTC22Q5TAA0 569 aa16.28■□□□□ 0.2
RCN1-202ENST00000506388 CD209Q9NNX6 404 aa16.28■□□□□ 0.2
RCN1-202ENST00000506388 ZNF219Q9P2Y4 722 aaPredicted RBP16.28■□□□□ 0.2
RCN1-202ENST00000506388 AK9Q5TCS8 1911 aa16.28■□□□□ 0.2
RCN1-202ENST00000506388 CCDC88AQ3V6T2 1871 aa16.28■□□□□ 0.2
RCN1-202ENST00000506388 VPS37DQ86XT2 251 aa16.27■□□□□ 0.2
RCN1-202ENST00000506388 DENND2AQ9ULE3 1009 aa16.27■□□□□ 0.2
RCN1-202ENST00000506388 DOCK2Q92608 1830 aa16.27■□□□□ 0.2
RCN1-202ENST00000506388 ZNF646O15015 1829 aaPredicted RBP16.27■□□□□ 0.19
RCN1-202ENST00000506388 MCAMP43121 646 aa16.27■□□□□ 0.19
RCN1-202ENST00000506388 RGS3P49796 1198 aa16.27■□□□□ 0.19
RCN1-202ENST00000506388 RBM19Q9Y4C8 960 aaKnown RBP16.27■□□□□ 0.19
RCN1-202ENST00000506388 FAM205AQ6ZU69 1335 aa16.26■□□□□ 0.19
RCN1-202ENST00000506388 SALL1Q9NSC2 1324 aa16.26■□□□□ 0.19
RCN1-202ENST00000506388 IARSP41252 1262 aaKnown RBP16.26■□□□□ 0.19
RCN1-202ENST00000506388 RASGRF1Q13972 1273 aa16.26■□□□□ 0.19
RCN1-202ENST00000506388 TMED8Q6PL24 325 aaPredicted RBP16.26■□□□□ 0.19
RCN1-202ENST00000506388 SPATA5Q8NB90 893 aa16.26■□□□□ 0.19
RCN1-202ENST00000506388 HMG20BQ9P0W2 317 aa16.26■□□□□ 0.19
RCN1-202ENST00000506388 GRIN3BO60391 1043 aa16.25■□□□□ 0.19
RCN1-202ENST00000506388 GSPT1P15170 499 aaKnown RBP16.25■□□□□ 0.19
RCN1-202ENST00000506388 YBX3P16989 372 aaKnown RBP eCLIP16.25■□□□□ 0.19
RCN1-202ENST00000506388 SKAP1Q86WV1 359 aa16.25■□□□□ 0.19
RCN1-202ENST00000506388 SCN9AQ15858 1988 aa16.25■□□□□ 0.19
RCN1-202ENST00000506388 MYH7P12883 1935 aa16.24■□□□□ 0.19
RCN1-202ENST00000506388 PPIP5K2O43314 1243 aa16.24■□□□□ 0.19
RCN1-202ENST00000506388 FKBP1AP62942 108 aaKnown RBP16.24■□□□□ 0.19
RCN1-202ENST00000506388 SCARF1Q14162 830 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms