RNA–Protein interactions for RNA: ENST00000505814.5

PTPN20-215, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN20, Length 1,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-215ENST00000505814 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
PTPN20-215ENST00000505814 PHAXQ9H814 394 aaKnown RBP11.64□□□□□ -0.55
PTPN20-215ENST00000505814 RNF40O75150 1001 aa11.63□□□□□ -0.55
PTPN20-215ENST00000505814 VAMP4O75379 141 aa11.63□□□□□ -0.55
PTPN20-215ENST00000505814 RASSF7Q02833 373 aa11.63□□□□□ -0.55
PTPN20-215ENST00000505814 TWISTNBQ3B726 338 aaPredicted RBP11.63□□□□□ -0.55
PTPN20-215ENST00000505814 TRMT2AQ8IZ69 625 aaKnown RBP11.63□□□□□ -0.55
PTPN20-215ENST00000505814 CHMP4AQ9BY43 222 aa11.63□□□□□ -0.55
PTPN20-215ENST00000505814 CCDC30Q5VVM6 783 aa11.62□□□□□ -0.55
PTPN20-215ENST00000505814 PPP1R42Q7Z4L9 355 aa11.62□□□□□ -0.55
PTPN20-215ENST00000505814 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
PTPN20-215ENST00000505814 CRAMP1Q96RY5 1269 aa11.62□□□□□ -0.55
PTPN20-215ENST00000505814 ELL2O00472 640 aaPredicted RBP11.61□□□□□ -0.55
PTPN20-215ENST00000505814 LMNB1P20700 586 aa11.61□□□□□ -0.55
PTPN20-215ENST00000505814 APLP1P51693 650 aa11.61□□□□□ -0.55
PTPN20-215ENST00000505814 AIMP1Q12904 312 aaKnown RBP11.61□□□□□ -0.55
PTPN20-215ENST00000505814 PTGDRQ13258 359 aa11.61□□□□□ -0.55
PTPN20-215ENST00000505814 C9orf131Q5VYM1 1079 aa11.61□□□□□ -0.55
PTPN20-215ENST00000505814 ARHGAP27Q6ZUM4 889 aa11.61□□□□□ -0.55
PTPN20-215ENST00000505814 DNAJC5GQ8N7S2 189 aa11.61□□□□□ -0.55
PTPN20-215ENST00000505814 UTP14AQ9BVJ6 771 aaKnown RBP11.61□□□□□ -0.55
PTPN20-215ENST00000505814 SH3TC1Q8TE82 1336 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 ADAMTSL1Q8N6G6 1762 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 C21orf2O43822 256 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 IGKV5-2P06315 115 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 EXOSC9Q06265 439 aaKnown RBP11.6□□□□□ -0.55
PTPN20-215ENST00000505814 SWT1Q5T5J6 900 aaKnown RBP11.6□□□□□ -0.55
PTPN20-215ENST00000505814 SOGA3Q5TF21 947 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 G2E3Q7L622 706 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 SLC51AQ86UW1 340 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 SYNE4Q8N205 404 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 METTL22Q9BUU2 404 aaPredicted RBP11.6□□□□□ -0.55
PTPN20-215ENST00000505814 MYH3P11055 1940 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 ABCC4O15439 1325 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 CDHR2Q9BYE9 1310 aa11.6□□□□□ -0.55
PTPN20-215ENST00000505814 TAF1P21675 1872 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 RTL9Q8NET4 1388 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 SLC4A3P48751 1232 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 SF3B3Q15393 1217 aaKnown RBP11.59□□□□□ -0.55
PTPN20-215ENST00000505814 CCDC93Q567U6 631 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 SLF2Q8IX21 1173 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 CCDC191Q8NCU4 936 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 ZNF622Q969S3 477 aaKnown RBP eCLIP11.59□□□□□ -0.55
PTPN20-215ENST00000505814 PSMD1Q99460 953 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 MYH16Q9H6N6 1097 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 A0A1B0GUL6 1792 aa11.59□□□□□ -0.55
PTPN20-215ENST00000505814 FAM177BA6PVY3 158 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 SEMA3EO15041 775 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 ALDH1B1P30837 517 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 SLFN5Q08AF3 891 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 FLIIQ13045 1269 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 TJAP1Q5JTD0 557 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 KSR2Q6VAB6 950 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 RNF181Q9P0P0 153 aa11.58□□□□□ -0.56
PTPN20-215ENST00000505814 ZNF646O15015 1829 aaPredicted RBP11.58□□□□□ -0.56
PTPN20-215ENST00000505814 ATP5J2-PTCD1G3V325 749 aa11.57□□□□□ -0.56
PTPN20-215ENST00000505814 PCCAP05165 728 aaPredicted RBP11.57□□□□□ -0.56
PTPN20-215ENST00000505814 CASP7P55210 303 aa11.57□□□□□ -0.56
PTPN20-215ENST00000505814 FKBP4Q02790 459 aaKnown RBP eCLIP11.57□□□□□ -0.56
PTPN20-215ENST00000505814 CC2D2BQ6DHV5 1058 aa11.57□□□□□ -0.56
PTPN20-215ENST00000505814 OLFM4Q6UX06 510 aa11.57□□□□□ -0.56
PTPN20-215ENST00000505814 ZBTB38Q8NAP3 1195 aaPredicted RBP11.57□□□□□ -0.56
PTPN20-215ENST00000505814 RTFDC1Q9BY42 306 aaPredicted RBP11.57□□□□□ -0.56
PTPN20-215ENST00000505814 TAOK3Q9H2K8 898 aa11.57□□□□□ -0.56
PTPN20-215ENST00000505814 TRMT112Q9UI30 125 aaKnown RBP11.57□□□□□ -0.56
PTPN20-215ENST00000505814 PI4KAP2A4QPH2 592 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 NEURL1BA8MQ27 555 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 E9PSI1 815 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 DDX58O95786 925 aaKnown RBP11.56□□□□□ -0.56
PTPN20-215ENST00000505814 HCLS1P14317 486 aaPredicted RBP11.56□□□□□ -0.56
PTPN20-215ENST00000505814 GRIPAP1Q4V328 841 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 PI4KAP1Q8N8J0 262 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 NLRP3Q96P20 1036 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 MTRQ99707 1265 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 IRX2Q9BZI1 471 aaPredicted RBP11.56□□□□□ -0.56
PTPN20-215ENST00000505814 IL21Q9HBE4 155 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 MAP3K2Q9Y2U5 619 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 ATP6V0A2Q9Y487 856 aa11.56□□□□□ -0.56
PTPN20-215ENST00000505814 POTECB2RU33 542 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 PPEF1O14829 653 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-215ENST00000505814 NPHP1O15259 732 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 GRAPQ13588 217 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 RIC3Q7Z5B4 369 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 GRAPLQ8TC17 118 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-215ENST00000505814 FAM89AQ96GI7 184 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 RBM17Q96I25 401 aaKnown RBP11.55□□□□□ -0.56
PTPN20-215ENST00000505814 MYD88Q99836 296 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 STK31Q9BXU1 1019 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 SALL2Q9Y467 1007 aaPredicted RBP11.55□□□□□ -0.56
PTPN20-215ENST00000505814 SCN4AP35499 1836 aa11.55□□□□□ -0.56
PTPN20-215ENST00000505814 PSME4Q14997 1843 aa11.54□□□□□ -0.56
PTPN20-215ENST00000505814 GLTPD2A6NH11 291 aa11.54□□□□□ -0.56
PTPN20-215ENST00000505814 GTF2E1P29083 439 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-215ENST00000505814 TMC4Q7Z404 712 aa11.54□□□□□ -0.56
PTPN20-215ENST00000505814 RBM46Q8TBY0 533 aaKnown RBP11.54□□□□□ -0.56
PTPN20-215ENST00000505814 RPGRQ92834 1020 aaKnown RBP11.54□□□□□ -0.56
PTPN20-215ENST00000505814 ZNF428Q96B54 188 aa11.54□□□□□ -0.56
PTPN20-215ENST00000505814 PLA2G12BQ9BX93 195 aa11.54□□□□□ -0.56
PTPN20-215ENST00000505814 CWC25Q9NXE8 425 aaPredicted RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms