RNA–Protein interactions for RNA: ENST00000505756.1

KDM3B-203, Transcript of lysine demethylase 3B, humanhuman

TSL 2

Gene KDM3B, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-203ENST00000505756 SCN9AQ15858 1988 aa14.28□□□□□ -0.12
KDM3B-203ENST00000505756 MROH5Q6ZUA9 1318 aa14.28□□□□□ -0.12
KDM3B-203ENST00000505756 USP17L1Q7RTZ2 530 aa14.28□□□□□ -0.12
KDM3B-203ENST00000505756 MEIS3Q99687 375 aa14.28□□□□□ -0.12
KDM3B-203ENST00000505756 PUS3Q9BZE2 481 aaKnown RBP14.28□□□□□ -0.12
KDM3B-203ENST00000505756 RIPOR2Q9Y4F9 1068 aa14.28□□□□□ -0.12
KDM3B-203ENST00000505756 IRS2Q9Y4H2 1338 aa14.28□□□□□ -0.12
KDM3B-203ENST00000505756 PSME4Q14997 1843 aa14.27□□□□□ -0.12
KDM3B-203ENST00000505756 PASKQ96RG2 1323 aa14.27□□□□□ -0.12
KDM3B-203ENST00000505756 SNAP23O00161 211 aa14.27□□□□□ -0.13
KDM3B-203ENST00000505756 PLIN1O60240 522 aa14.27□□□□□ -0.13
KDM3B-203ENST00000505756 ITGBL1O95965 494 aaPredicted RBP14.27□□□□□ -0.13
KDM3B-203ENST00000505756 MAP1SQ66K74 1059 aaPredicted RBP14.27□□□□□ -0.13
KDM3B-203ENST00000505756 RSBN1LQ6PCB5 846 aaPredicted RBP14.27□□□□□ -0.13
KDM3B-203ENST00000505756 CNTROBQ8N137 903 aa14.27□□□□□ -0.13
KDM3B-203ENST00000505756 AGBL3Q8NEM8 1001 aa14.27□□□□□ -0.13
KDM3B-203ENST00000505756 CLUAP1Q96AJ1 413 aa14.27□□□□□ -0.13
KDM3B-203ENST00000505756 TNNQ9UQP3 1299 aa14.27□□□□□ -0.13
KDM3B-203ENST00000505756 SHTN1A0MZ66 631 aa14.26□□□□□ -0.13
KDM3B-203ENST00000505756 RFX5P48382 616 aaPredicted RBP14.26□□□□□ -0.13
KDM3B-203ENST00000505756 UBE4AQ14139 1066 aa14.26□□□□□ -0.13
KDM3B-203ENST00000505756 STRIP1Q5VSL9 837 aa14.26□□□□□ -0.13
KDM3B-203ENST00000505756 ZNF804AQ7Z570 1209 aa14.26□□□□□ -0.13
KDM3B-203ENST00000505756 KLHDC4Q8TBB5 520 aa14.26□□□□□ -0.13
KDM3B-203ENST00000505756 ZC3H15Q8WU90 426 aaKnown RBP14.26□□□□□ -0.13
KDM3B-203ENST00000505756 LRRFIP2Q9Y608 721 aaKnown RBP14.26□□□□□ -0.13
KDM3B-203ENST00000505756 MYO3BQ8WXR4 1341 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 HIRAP54198 1017 aaPredicted RBP14.25□□□□□ -0.13
KDM3B-203ENST00000505756 LRRC24Q50LG9 513 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 METTL24Q5JXM2 366 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 DACT2Q5SW24 774 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 FTSJ3Q8IY81 847 aaKnown RBP14.25□□□□□ -0.13
KDM3B-203ENST00000505756 TMEM57Q8N5G2 664 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 TRPM4Q8TD43 1214 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 CD209Q9NNX6 404 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 PGAP2Q9UHJ9 254 aa14.25□□□□□ -0.13
KDM3B-203ENST00000505756 PDE8BO95263 885 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 IL1R1P14778 569 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 HTRA3P83110 453 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 PTPN12Q05209 780 aaKnown RBP14.24□□□□□ -0.13
KDM3B-203ENST00000505756 SAMD7Q7Z3H4 446 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 FBXW7Q969H0 707 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 GMLQ99445 158 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 CREBZFQ9NS37 354 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 FBXO3Q9UK99 471 aa14.24□□□□□ -0.13
KDM3B-203ENST00000505756 EYA2O00167 538 aa14.23□□□□□ -0.13
KDM3B-203ENST00000505756 USP17L8P0C7I0 530 aa14.23□□□□□ -0.13
KDM3B-203ENST00000505756 RRP1P56182 461 aaKnown RBP14.23□□□□□ -0.13
KDM3B-203ENST00000505756 ZNF280AP59817 542 aaPredicted RBP14.23□□□□□ -0.13
KDM3B-203ENST00000505756 KIF4BQ2VIQ3 1234 aa14.23□□□□□ -0.13
KDM3B-203ENST00000505756 TBC1D10BQ4KMP7 808 aaPredicted RBP14.23□□□□□ -0.13
KDM3B-203ENST00000505756 TTLL5Q6EMB2 1281 aa14.23□□□□□ -0.13
KDM3B-203ENST00000505756 DZIP1LQ8IYY4 767 aaKnown RBP14.23□□□□□ -0.13
KDM3B-203ENST00000505756 DNAJC5GQ8N7S2 189 aa14.23□□□□□ -0.13
KDM3B-203ENST00000505756 VGLL2Q8N8G2 317 aa14.23□□□□□ -0.13
KDM3B-203ENST00000505756 ZNF646O15015 1829 aaPredicted RBP14.22□□□□□ -0.13
KDM3B-203ENST00000505756 CIAO1O76071 339 aa14.22□□□□□ -0.13
KDM3B-203ENST00000505756 EGFRP00533 1210 aa14.22□□□□□ -0.13
KDM3B-203ENST00000505756 GNAI2P04899 355 aa14.22□□□□□ -0.13
KDM3B-203ENST00000505756 MMP14P50281 582 aa14.22□□□□□ -0.13
KDM3B-203ENST00000505756 GTF2IP78347 998 aa14.22□□□□□ -0.13
KDM3B-203ENST00000505756 MTX1Q13505 466 aa14.22□□□□□ -0.13
KDM3B-203ENST00000505756 TMEM88BA6NKF7 163 aa14.21□□□□□ -0.13
KDM3B-203ENST00000505756 SRGAP3O43295 1099 aa14.21□□□□□ -0.13
KDM3B-203ENST00000505756 HIBADHP31937 336 aaKnown RBP14.21□□□□□ -0.13
KDM3B-203ENST00000505756 PUM3Q15397 648 aaKnown RBP14.21□□□□□ -0.13
KDM3B-203ENST00000505756 RBM26Q5T8P6 1007 aaKnown RBP14.21□□□□□ -0.13
KDM3B-203ENST00000505756 ATG9AQ7Z3C6 839 aa14.21□□□□□ -0.13
KDM3B-203ENST00000505756 OGFOD1Q8N543 542 aa14.21□□□□□ -0.13
KDM3B-203ENST00000505756 MXD3Q9BW11 206 aa14.21□□□□□ -0.13
KDM3B-203ENST00000505756 MYOZ2Q9NPC6 264 aa14.21□□□□□ -0.13
KDM3B-203ENST00000505756 COPRSQ9NQ92 184 aa14.21□□□□□ -0.13
KDM3B-203ENST00000505756 SUPT16HQ9Y5B9 1047 aaKnown RBP14.21□□□□□ -0.13
KDM3B-203ENST00000505756 SASH1O94885 1247 aa14.2□□□□□ -0.14
KDM3B-203ENST00000505756 IL15P40933 162 aaPredicted RBP14.2□□□□□ -0.14
KDM3B-203ENST00000505756 GYG1P46976 350 aa14.2□□□□□ -0.14
KDM3B-203ENST00000505756 FKBP1AP62942 108 aaKnown RBP14.2□□□□□ -0.14
KDM3B-203ENST00000505756 CAVIN4Q5BKX8 364 aa14.2□□□□□ -0.14
KDM3B-203ENST00000505756 CDC37L1Q7L3B6 337 aa14.2□□□□□ -0.14
KDM3B-203ENST00000505756 ITPRIPQ8IWB1 547 aa14.2□□□□□ -0.14
KDM3B-203ENST00000505756 KLRG1Q96E93 195 aa14.2□□□□□ -0.14
KDM3B-203ENST00000505756 FAM84BQ96KN1 310 aaPredicted RBP14.2□□□□□ -0.14
KDM3B-203ENST00000505756 SIL1Q9H173 461 aa14.2□□□□□ -0.14
KDM3B-203ENST00000505756 TRAF5O00463 557 aa14.19□□□□□ -0.14
KDM3B-203ENST00000505756 IFIT1P09914 478 aaKnown RBP14.19□□□□□ -0.14
KDM3B-203ENST00000505756 MS4A1P11836 297 aa14.19□□□□□ -0.14
KDM3B-203ENST00000505756 RLBP1P12271 317 aa14.19□□□□□ -0.14
KDM3B-203ENST00000505756 FGFR2P21802 821 aa14.19□□□□□ -0.14
KDM3B-203ENST00000505756 ERICH6BQ5W0A0 696 aa14.19□□□□□ -0.14
KDM3B-203ENST00000505756 VPS37DQ86XT2 251 aa14.19□□□□□ -0.14
KDM3B-203ENST00000505756 TDRD7Q8NHU6 1098 aaKnown RBP14.19□□□□□ -0.14
KDM3B-203ENST00000505756 DCPSQ96C86 337 aaKnown RBP14.19□□□□□ -0.14
KDM3B-203ENST00000505756 GLIS2Q9BZE0 524 aaPredicted RBP14.19□□□□□ -0.14
KDM3B-203ENST00000505756 HDAC9Q9UKV0 1011 aa14.19□□□□□ -0.14
KDM3B-203ENST00000505756 FAM205AQ6ZU69 1335 aa14.18□□□□□ -0.14
KDM3B-203ENST00000505756 SLC5A1P13866 664 aa14.18□□□□□ -0.14
KDM3B-203ENST00000505756 FBXO33Q7Z6M2 555 aa14.18□□□□□ -0.14
KDM3B-203ENST00000505756 KIAA0825Q8IV33 1275 aa14.18□□□□□ -0.14
KDM3B-203ENST00000505756 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
KDM3B-203ENST00000505756 LPIN2Q92539 896 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms