RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 MICAL2O94851 1124 aa6.7□□□□□ -1.34
RFC1-208ENST00000504849 MESP2Q0VG99 397 aa6.7□□□□□ -1.34
RFC1-208ENST00000504849 LCNL1Q6ZST4 164 aa6.7□□□□□ -1.34
RFC1-208ENST00000504849 SIX5Q8N196 739 aa6.7□□□□□ -1.34
RFC1-208ENST00000504849 KLHL23Q8NBE8 558 aa6.7□□□□□ -1.34
RFC1-208ENST00000504849 GAS2L2Q8NHY3 880 aa6.7□□□□□ -1.34
RFC1-208ENST00000504849 CHMP7Q8WUX9 453 aaPredicted RBP6.7□□□□□ -1.34
RFC1-208ENST00000504849 ALG2Q9H553 416 aa6.7□□□□□ -1.34
RFC1-208ENST00000504849 RASA1P20936 1047 aa6.69□□□□□ -1.34
RFC1-208ENST00000504849 KSR1Q8IVT5 923 aa6.69□□□□□ -1.34
RFC1-208ENST00000504849 GIMAP7Q8NHV1 300 aa6.69□□□□□ -1.34
RFC1-208ENST00000504849 KLHDC7BQ96G42 594 aa6.69□□□□□ -1.34
RFC1-208ENST00000504849 LACRTQ9GZZ8 138 aa6.69□□□□□ -1.34
RFC1-208ENST00000504849 RBSNQ9H1K0 784 aa6.69□□□□□ -1.34
RFC1-208ENST00000504849 RTCBQ9Y3I0 505 aaKnown RBP6.69□□□□□ -1.34
RFC1-208ENST00000504849 CYP26A1O43174 497 aa6.68□□□□□ -1.34
RFC1-208ENST00000504849 XYLBO75191 536 aa6.68□□□□□ -1.34
RFC1-208ENST00000504849 CDC25BP30305 580 aa6.68□□□□□ -1.34
RFC1-208ENST00000504849 ATP1A2P50993 1020 aa6.68□□□□□ -1.34
RFC1-208ENST00000504849 ATP11AP98196 1134 aa6.68□□□□□ -1.34
RFC1-208ENST00000504849 LARGE2Q8N3Y3 721 aa6.68□□□□□ -1.34
RFC1-208ENST00000504849 CCDC82Q8N4S0 544 aa6.68□□□□□ -1.34
RFC1-208ENST00000504849 EPHA1P21709 976 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 CFPP27918 469 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 CDC27P30260 824 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 ADMP35318 185 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 DGKZQ13574 1117 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 COL13A1Q5TAT6 717 aaPredicted RBP6.67□□□□□ -1.34
RFC1-208ENST00000504849 TRAIPQ9BWF2 469 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 RNF208Q9H0X6 261 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 KCNMB2Q9Y691 235 aa6.67□□□□□ -1.34
RFC1-208ENST00000504849 ZNF792Q3KQV3 632 aa6.66□□□□□ -1.34
RFC1-208ENST00000504849 PLEKHM2Q8IWE5 1019 aa6.66□□□□□ -1.34
RFC1-208ENST00000504849 OGFOD1Q8N543 542 aa6.66□□□□□ -1.34
RFC1-208ENST00000504849 METTL22Q9BUU2 404 aaPredicted RBP6.66□□□□□ -1.34
RFC1-208ENST00000504849 PALM3A6NDB9 673 aaPredicted RBP6.65□□□□□ -1.34
RFC1-208ENST00000504849 BIN1O00499 593 aa6.65□□□□□ -1.34
RFC1-208ENST00000504849 ZNF574Q6ZN55 896 aaPredicted RBP6.65□□□□□ -1.34
RFC1-208ENST00000504849 FAM168AQ92567 244 aa6.65□□□□□ -1.34
RFC1-208ENST00000504849 GATA6Q92908 595 aa6.65□□□□□ -1.34
RFC1-208ENST00000504849 QTRT2Q9H974 415 aaKnown RBP6.65□□□□□ -1.34
RFC1-208ENST00000504849 ZC3H7BQ9UGR2 993 aaKnown RBP6.65□□□□□ -1.34
RFC1-208ENST00000504849 TTLL10Q6ZVT0 673 aa6.64□□□□□ -1.35
RFC1-208ENST00000504849 GLIS3Q8NEA6 775 aa6.64□□□□□ -1.35
RFC1-208ENST00000504849 BHLHE22Q8NFJ8 381 aaPredicted RBP6.64□□□□□ -1.35
RFC1-208ENST00000504849 USP17L3A6NCW0 530 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 USP17L4A6NCW7 530 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 GAS2O43903 313 aaKnown RBP6.63□□□□□ -1.35
RFC1-208ENST00000504849 CEP135Q66GS9 1140 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 FDX2Q6P4F2 183 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 USP17L2Q6R6M4 530 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 USP17L1Q7RTZ2 530 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 SPRED2Q7Z698 418 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 ATG4DQ86TL0 474 aaPredicted RBP6.63□□□□□ -1.35
RFC1-208ENST00000504849 BCL7CQ8WUZ0 217 aaPredicted RBP6.63□□□□□ -1.35
RFC1-208ENST00000504849 TMEM40Q8WWA1 233 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 SEC31BQ9NQW1 1179 aa6.63□□□□□ -1.35
RFC1-208ENST00000504849 SH2B1Q9NRF2 756 aaPredicted RBP6.63□□□□□ -1.35
RFC1-208ENST00000504849 MEGF11A6BM72 1044 aa6.62□□□□□ -1.35
RFC1-208ENST00000504849 FAM170BA6NMN3 283 aa6.62□□□□□ -1.35
RFC1-208ENST00000504849 ZAR1Q86SH2 424 aa6.62□□□□□ -1.35
RFC1-208ENST00000504849 CLUAP1Q96AJ1 413 aa6.62□□□□□ -1.35
RFC1-208ENST00000504849 ZNF594Q96JF6 807 aaPredicted RBP6.62□□□□□ -1.35
RFC1-208ENST00000504849 SLC38A3Q99624 504 aa6.62□□□□□ -1.35
RFC1-208ENST00000504849 RUSC1Q9BVN2 902 aa6.62□□□□□ -1.35
RFC1-208ENST00000504849 SERPINA10Q9UK55 444 aa6.62□□□□□ -1.35
RFC1-208ENST00000504849 TIAF1O95411 115 aa6.61□□□□□ -1.35
RFC1-208ENST00000504849 RXRBP28702 533 aa6.61□□□□□ -1.35
RFC1-208ENST00000504849 PLCL1Q15111 1095 aa6.61□□□□□ -1.35
RFC1-208ENST00000504849 RGL4Q8IZJ4 473 aa6.61□□□□□ -1.35
RFC1-208ENST00000504849 CMTR1Q8N1G2 835 aaKnown RBP6.61□□□□□ -1.35
RFC1-208ENST00000504849 RASSF4Q9H2L5 321 aa6.61□□□□□ -1.35
RFC1-208ENST00000504849 LMCD1Q9NZU5 365 aa6.61□□□□□ -1.35
RFC1-208ENST00000504849 FAM95CA0A1B0GW59 222 aa6.6□□□□□ -1.35
RFC1-208ENST00000504849 MCM6Q14566 821 aa6.6□□□□□ -1.35
RFC1-208ENST00000504849 TRIP4Q15650 581 aaPredicted RBP6.6□□□□□ -1.35
RFC1-208ENST00000504849 OR13H1Q8NG92 308 aa6.6□□□□□ -1.35
RFC1-208ENST00000504849 FAM84AQ96KN4 292 aa6.6□□□□□ -1.35
RFC1-208ENST00000504849 PRKAG2Q9UGJ0 569 aa6.6□□□□□ -1.35
RFC1-208ENST00000504849 RAPGEFL1Q9UHV5 662 aa6.6□□□□□ -1.35
RFC1-208ENST00000504849 LGR5O75473 907 aa6.59□□□□□ -1.35
RFC1-208ENST00000504849 SMNDC1O75940 238 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFC1-208ENST00000504849 NLRP12P59046 1061 aa6.59□□□□□ -1.35
RFC1-208ENST00000504849 NFKBIBQ15653 356 aa6.59□□□□□ -1.35
RFC1-208ENST00000504849 CDPF1Q6NVV7 123 aa6.59□□□□□ -1.35
RFC1-208ENST00000504849 FAM117BQ6P1L5 589 aa6.59□□□□□ -1.35
RFC1-208ENST00000504849 PROSER2Q86WR7 435 aaPredicted RBP6.59□□□□□ -1.35
RFC1-208ENST00000504849 CCDC97Q96F63 343 aaPredicted RBP6.59□□□□□ -1.35
RFC1-208ENST00000504849 TOX2Q96NM4 488 aa6.59□□□□□ -1.35
RFC1-208ENST00000504849 ADAM19Q9H013 955 aa6.59□□□□□ -1.35
RFC1-208ENST00000504849 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.59□□□□□ -1.35
RFC1-208ENST00000504849 IGFBP4P22692 258 aa6.58□□□□□ -1.36
RFC1-208ENST00000504849 C11orf91Q3C1V1 193 aa6.58□□□□□ -1.36
RFC1-208ENST00000504849 SIAH1Q8IUQ4 282 aa6.58□□□□□ -1.36
RFC1-208ENST00000504849 MYO19Q96H55 970 aa6.58□□□□□ -1.36
RFC1-208ENST00000504849 TBC1D32Q96NH3 1257 aa6.58□□□□□ -1.36
RFC1-208ENST00000504849 TMPRSS13Q9BYE2 586 aa6.58□□□□□ -1.36
RFC1-208ENST00000504849 MKRN1Q9UHC7 482 aaKnown RBP6.58□□□□□ -1.36
RFC1-208ENST00000504849 ADAMTS6Q9UKP5 1117 aa6.58□□□□□ -1.36
RFC1-208ENST00000504849 SLC5A6Q9Y289 635 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms