RNA–Protein interactions for RNA: ENST00000504781.5

DDX41-203, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 618 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-203ENST00000504781 TTC39AQ5SRH9 613 aa12.29□□□□□ -0.44
DDX41-203ENST00000504781 ARHGAP27Q6ZUM4 889 aa12.29□□□□□ -0.44
DDX41-203ENST00000504781 TMC4Q7Z404 712 aa12.29□□□□□ -0.44
DDX41-203ENST00000504781 MAP4K4O95819 1239 aaPredicted RBP12.28□□□□□ -0.44
DDX41-203ENST00000504781 PDE6BP35913 854 aa12.28□□□□□ -0.44
DDX41-203ENST00000504781 DDR1Q08345 913 aa12.28□□□□□ -0.44
DDX41-203ENST00000504781 GRAPQ13588 217 aa12.28□□□□□ -0.44
DDX41-203ENST00000504781 GRAPLQ8TC17 118 aaPredicted RBP12.28□□□□□ -0.44
DDX41-203ENST00000504781 RPGRQ92834 1020 aaKnown RBP12.28□□□□□ -0.44
DDX41-203ENST00000504781 CELF1Q92879 486 aaKnown RBP12.28□□□□□ -0.44
DDX41-203ENST00000504781 IPO9Q96P70 1041 aaKnown RBP12.28□□□□□ -0.44
DDX41-203ENST00000504781 ZNF609O15014 1411 aa12.28□□□□□ -0.44
DDX41-203ENST00000504781 SGSM2O43147 1006 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 ARID4AP29374 1257 aaPredicted RBP12.27□□□□□ -0.45
DDX41-203ENST00000504781 ALDH1B1P30837 517 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.45
DDX41-203ENST00000504781 KIAA1211Q6ZU35 1233 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 KBTBD3Q8NAB2 608 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 HELBQ8NG08 1087 aaPredicted RBP12.27□□□□□ -0.45
DDX41-203ENST00000504781 SNRKQ9NRH2 765 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 DIAPH3Q9NSV4 1193 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 PAG1Q9NWQ8 432 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 LEMD3Q9Y2U8 911 aa12.27□□□□□ -0.45
DDX41-203ENST00000504781 TAF5LO75529 589 aa12.26□□□□□ -0.45
DDX41-203ENST00000504781 ZFYP08048 801 aaPredicted RBP12.26□□□□□ -0.45
DDX41-203ENST00000504781 CAVIN4Q5BKX8 364 aa12.26□□□□□ -0.45
DDX41-203ENST00000504781 CCDC102BQ68D86 513 aa12.26□□□□□ -0.45
DDX41-203ENST00000504781 CCDC24Q8N4L8 307 aa12.26□□□□□ -0.45
DDX41-203ENST00000504781 FSD1Q9BTV5 496 aa12.26□□□□□ -0.45
DDX41-203ENST00000504781 GNL3LQ9NVN8 582 aaKnown RBP12.26□□□□□ -0.45
DDX41-203ENST00000504781 AK9Q5TCS8 1911 aa12.26□□□□□ -0.45
DDX41-203ENST00000504781 RFX7Q2KHR2 1363 aa12.26□□□□□ -0.45
DDX41-203ENST00000504781 IGSF3O75054 1194 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 NPR1P16066 1061 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 ADORA1P30542 326 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 ZSCAN25Q6NSZ9 544 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 CWC27Q6UX04 472 aaKnown RBP12.25□□□□□ -0.45
DDX41-203ENST00000504781 HELLSQ9NRZ9 838 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 PIM2Q9P1W9 311 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 RAD50Q92878 1312 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 C10orf71Q711Q0 1435 aa12.25□□□□□ -0.45
DDX41-203ENST00000504781 SRGNP10124 158 aa12.24□□□□□ -0.45
DDX41-203ENST00000504781 MCCP23508 829 aa12.24□□□□□ -0.45
DDX41-203ENST00000504781 CHRNA5P30532 468 aa12.24□□□□□ -0.45
DDX41-203ENST00000504781 FKBP4Q02790 459 aaKnown RBP eCLIP12.24□□□□□ -0.45
DDX41-203ENST00000504781 C15orf52Q6ZUT6 534 aaKnown RBP12.24□□□□□ -0.45
DDX41-203ENST00000504781 FBXO33Q7Z6M2 555 aa12.24□□□□□ -0.45
DDX41-203ENST00000504781 SP8Q8IXZ3 490 aa12.24□□□□□ -0.45
DDX41-203ENST00000504781 DNAJC2Q99543 621 aaKnown RBP12.24□□□□□ -0.45
DDX41-203ENST00000504781 SPEF2Q9C093 1822 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 NRXN2Q9P2S2 1712 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 GOLIM4O00461 696 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 SEMA3EO15041 775 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 RNF113AO15541 343 aaKnown RBP12.23□□□□□ -0.45
DDX41-203ENST00000504781 ATP2B4P23634 1241 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 ANAPC15P60006 121 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 MCMDC2Q4G0Z9 681 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 DALRD3Q5D0E6 543 aaKnown RBP12.23□□□□□ -0.45
DDX41-203ENST00000504781 IL17RAQ96F46 866 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 MASTLQ96GX5 879 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.23□□□□□ -0.452e-6■□□□□ 10.4
DDX41-203ENST00000504781 PODXL2Q9NZ53 605 aa12.23□□□□□ -0.45
DDX41-203ENST00000504781 ZNF804BA4D1E1 1349 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 H0YIN7 160 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 KCNA3P22001 575 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 MCAMP43121 646 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 ZAP70P43403 619 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 PHKA1P46020 1223 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 KCNJ4P48050 445 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 BCAMP50895 628 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 BECN1Q14457 450 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 TMED8Q6PL24 325 aaPredicted RBP12.22□□□□□ -0.45
DDX41-203ENST00000504781 SPATA5Q8NB90 893 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 FAM84BQ96KN1 310 aaPredicted RBP12.22□□□□□ -0.45
DDX41-203ENST00000504781 ANO2Q9NQ90 1003 aa12.22□□□□□ -0.45
DDX41-203ENST00000504781 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
DDX41-203ENST00000504781 TAF1P21675 1872 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 XDHP47989 1333 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 CYP2E1P05181 493 aaPredicted RBP12.21□□□□□ -0.45
DDX41-203ENST00000504781 HIBADHP31937 336 aaKnown RBP12.21□□□□□ -0.45
DDX41-203ENST00000504781 NMIQ13287 307 aaPredicted RBP12.21□□□□□ -0.45
DDX41-203ENST00000504781 SCARF1Q14162 830 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 STYK1Q6J9G0 422 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 VPS37DQ86XT2 251 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 MAP4K1Q92918 833 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 EDC3Q96F86 508 aaKnown RBP12.21□□□□□ -0.45
DDX41-203ENST00000504781 TMX4Q9H1E5 349 aaPredicted RBP12.21□□□□□ -0.45
DDX41-203ENST00000504781 HMG20BQ9P0W2 317 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 ANKIB1Q9P2G1 1089 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 DENND2AQ9ULE3 1009 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 ATP6V0A2Q9Y487 856 aa12.21□□□□□ -0.45
DDX41-203ENST00000504781 KIF13BQ9NQT8 1826 aa12.21□□□□□ -0.46
DDX41-203ENST00000504781 PDS5AQ29RF7 1337 aaKnown RBP12.2□□□□□ -0.46
DDX41-203ENST00000504781 HSPA4P34932 840 aa12.2□□□□□ -0.46
DDX41-203ENST00000504781 UBE3CQ15386 1083 aa12.2□□□□□ -0.46
DDX41-203ENST00000504781 ZMYM1Q5SVZ6 1142 aa12.2□□□□□ -0.46
DDX41-203ENST00000504781 C9orf131Q5VYM1 1079 aa12.2□□□□□ -0.46
DDX41-203ENST00000504781 SNX21Q969T3 373 aa12.2□□□□□ -0.46
DDX41-203ENST00000504781 FAM227BQ96M60 508 aa12.2□□□□□ -0.46
DDX41-203ENST00000504781 KIF2CQ99661 725 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms