RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 KIF3CO14782 793 aa22.06■■□□□ 1.12
SMAD1-204ENST00000503324 IL15P40933 162 aaPredicted RBP22.06■■□□□ 1.12
SMAD1-204ENST00000503324 CIAPIN1Q6FI81 312 aa22.06■■□□□ 1.12
SMAD1-204ENST00000503324 CHMP4BQ9H444 224 aaKnown RBP22.06■■□□□ 1.12
SMAD1-204ENST00000503324 RRAGCQ9HB90 399 aa22.06■■□□□ 1.12
SMAD1-204ENST00000503324 GJA3Q9Y6H8 435 aa22.06■■□□□ 1.12
SMAD1-204ENST00000503324 FGFR2P21802 821 aa22.05■■□□□ 1.12
SMAD1-204ENST00000503324 PODNQ7Z5L7 613 aa22.05■■□□□ 1.12
SMAD1-204ENST00000503324 COA1Q9GZY4 146 aa22.05■■□□□ 1.12
SMAD1-204ENST00000503324 PSMD14O00487 310 aa22.04■■□□□ 1.12
SMAD1-204ENST00000503324 G3V3G9 751 aa22.03■■□□□ 1.12
SMAD1-204ENST00000503324 TNIP1Q15025 636 aa22.03■■□□□ 1.12
SMAD1-204ENST00000503324 PUM3Q15397 648 aaKnown RBP22.03■■□□□ 1.12
SMAD1-204ENST00000503324 DCAF8Q5TAQ9 597 aa22.03■■□□□ 1.12
SMAD1-204ENST00000503324 SIRT2Q8IXJ6 389 aa22.03■■□□□ 1.12
SMAD1-204ENST00000503324 PSME4Q14997 1843 aa22.02■■□□□ 1.12
SMAD1-204ENST00000503324 VEGFAP15692 232 aaPredicted RBP22.02■■□□□ 1.12
SMAD1-204ENST00000503324 SCNN1DP51172 638 aa22.02■■□□□ 1.12
SMAD1-204ENST00000503324 RPAP2Q8IXW5 612 aaPredicted RBP22.02■■□□□ 1.12
SMAD1-204ENST00000503324 CD209Q9NNX6 404 aa22.02■■□□□ 1.12
SMAD1-204ENST00000503324 CEP126Q9P2H0 1117 aa22.02■■□□□ 1.12
SMAD1-204ENST00000503324 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.02■■□□□ 1.12
SMAD1-204ENST00000503324 ZNF646O15015 1829 aaPredicted RBP22.01■■□□□ 1.11
SMAD1-204ENST00000503324 GMPSP49915 693 aaPredicted RBP22.01■■□□□ 1.11
SMAD1-204ENST00000503324 FAM84BQ96KN1 310 aaPredicted RBP22.01■■□□□ 1.11
SMAD1-204ENST00000503324 NOP58Q9Y2X3 529 aaKnown RBP22.01■■□□□ 1.11
SMAD1-204ENST00000503324 SCN4AP35499 1836 aa22.01■■□□□ 1.11
SMAD1-204ENST00000503324 VIL1P09327 827 aaKnown RBP22■■□□□ 1.11
SMAD1-204ENST00000503324 IL1R1P14778 569 aa22■■□□□ 1.11
SMAD1-204ENST00000503324 GYG1P46976 350 aa22■■□□□ 1.11
SMAD1-204ENST00000503324 ZNF804AQ7Z570 1209 aa22■■□□□ 1.11
SMAD1-204ENST00000503324 LPIN2Q92539 896 aa22■■□□□ 1.11
SMAD1-204ENST00000503324 CRBNQ96SW2 442 aa22■■□□□ 1.11
SMAD1-204ENST00000503324 SUPT16HQ9Y5B9 1047 aaKnown RBP22■■□□□ 1.11
SMAD1-204ENST00000503324 USP17L3A6NCW0 530 aa21.99■■□□□ 1.11
SMAD1-204ENST00000503324 USP17L4A6NCW7 530 aa21.99■■□□□ 1.11
SMAD1-204ENST00000503324 SURF6O75683 361 aaKnown RBP21.99■■□□□ 1.11
SMAD1-204ENST00000503324 SASH1O94885 1247 aa21.99■■□□□ 1.11
SMAD1-204ENST00000503324 TFCP2Q12800 502 aa21.99■■□□□ 1.11
SMAD1-204ENST00000503324 G3BP1Q13283 466 aaKnown RBP eCLIP21.99■■□□□ 1.11
SMAD1-204ENST00000503324 USP17L1Q7RTZ2 530 aa21.99■■□□□ 1.11
SMAD1-204ENST00000503324 FBXO33Q7Z6M2 555 aa21.99■■□□□ 1.11
SMAD1-204ENST00000503324 HACL1Q9UJ83 578 aa21.99■■□□□ 1.11
SMAD1-204ENST00000503324 ZBTB12Q9Y330 459 aaPredicted RBP21.99■■□□□ 1.11
SMAD1-204ENST00000503324 ZNF609O15014 1411 aa21.98■■□□□ 1.11
SMAD1-204ENST00000503324 IQCA1LA6NCM1 817 aa21.98■■□□□ 1.11
SMAD1-204ENST00000503324 IFIT1P09914 478 aaKnown RBP21.98■■□□□ 1.11
SMAD1-204ENST00000503324 HIBADHP31937 336 aaKnown RBP21.98■■□□□ 1.11
SMAD1-204ENST00000503324 ATP2B3Q16720 1220 aa21.98■■□□□ 1.11
SMAD1-204ENST00000503324 TAF1DQ9H5J8 278 aaPredicted RBP21.98■■□□□ 1.11
SMAD1-204ENST00000503324 GPRC5DQ9NZD1 345 aa21.98■■□□□ 1.11
SMAD1-204ENST00000503324 SLC5A1P13866 664 aa21.97■■□□□ 1.11
SMAD1-204ENST00000503324 EPS15P42566 896 aa21.97■■□□□ 1.11
SMAD1-204ENST00000503324 DACT2Q5SW24 774 aa21.97■■□□□ 1.11
SMAD1-204ENST00000503324 RSBN1LQ6PCB5 846 aaPredicted RBP21.97■■□□□ 1.11
SMAD1-204ENST00000503324 TDRD7Q8NHU6 1098 aaKnown RBP21.97■■□□□ 1.11
SMAD1-204ENST00000503324 RPS12P25398 132 aaKnown RBP21.96■■□□□ 1.11
SMAD1-204ENST00000503324 BCAMP50895 628 aa21.96■■□□□ 1.11
SMAD1-204ENST00000503324 STRIP1Q5VSL9 837 aa21.96■■□□□ 1.11
SMAD1-204ENST00000503324 DPF2Q92785 391 aa21.96■■□□□ 1.11
SMAD1-204ENST00000503324 GMLQ99445 158 aa21.96■■□□□ 1.11
SMAD1-204ENST00000503324 ARAP2Q8WZ64 1704 aa21.95■■□□□ 1.1
SMAD1-204ENST00000503324 SHTN1A0MZ66 631 aa21.95■■□□□ 1.1
SMAD1-204ENST00000503324 LMOD1P29536 600 aaPredicted RBP21.95■■□□□ 1.1
SMAD1-204ENST00000503324 EPHX2P34913 555 aa21.95■■□□□ 1.1
SMAD1-204ENST00000503324 GTF2IP78347 998 aa21.95■■□□□ 1.1
SMAD1-204ENST00000503324 CAVIN4Q5BKX8 364 aa21.95■■□□□ 1.1
SMAD1-204ENST00000503324 TTLL5Q6EMB2 1281 aa21.95■■□□□ 1.1
SMAD1-204ENST00000503324 MXD3Q9BW11 206 aa21.95■■□□□ 1.1
SMAD1-204ENST00000503324 A0A1B0GUL7 405 aa21.94■■□□□ 1.1
SMAD1-204ENST00000503324 HMMRO75330 724 aa21.94■■□□□ 1.1
SMAD1-204ENST00000503324 ADORA1P30542 326 aa21.94■■□□□ 1.1
SMAD1-204ENST00000503324 TIMM10P62072 90 aa21.94■■□□□ 1.1
SMAD1-204ENST00000503324 AGBL3Q8NEM8 1001 aa21.94■■□□□ 1.1
SMAD1-204ENST00000503324 CNOT7Q9UIV1 285 aaKnown RBP21.94■■□□□ 1.1
SMAD1-204ENST00000503324 EXOC6BQ9Y2D4 811 aa21.94■■□□□ 1.1
SMAD1-204ENST00000503324 AKAP2Q9Y2D5 859 aa21.94■■□□□ 1.1
SMAD1-204ENST00000503324 TOMM70O94826 608 aa21.93■■□□□ 1.1
SMAD1-204ENST00000503324 POTEIP0CG38 1075 aa21.93■■□□□ 1.1
SMAD1-204ENST00000503324 POTEJP0CG39 1038 aa21.93■■□□□ 1.1
SMAD1-204ENST00000503324 OS9Q13438 667 aaPredicted RBP21.93■■□□□ 1.1
SMAD1-204ENST00000503324 MICALL2Q8IY33 904 aa21.93■■□□□ 1.1
SMAD1-204ENST00000503324 FBXW7Q969H0 707 aa21.93■■□□□ 1.1
SMAD1-204ENST00000503324 PCDHB15Q9Y5E8 787 aa21.93■■□□□ 1.1
SMAD1-204ENST00000503324 ADAMTSL1Q8N6G6 1762 aa21.92■■□□□ 1.1
SMAD1-204ENST00000503324 FAM205AQ6ZU69 1335 aa21.92■■□□□ 1.1
SMAD1-204ENST00000503324 VPS37DQ86XT2 251 aa21.92■■□□□ 1.1
SMAD1-204ENST00000503324 CERS5Q8N5B7 392 aa21.92■■□□□ 1.1
SMAD1-204ENST00000503324 GPR108Q9NPR9 543 aa21.92■■□□□ 1.1
SMAD1-204ENST00000503324 C16orf71Q8IYS4 520 aaPredicted RBP21.91■■□□□ 1.1
SMAD1-204ENST00000503324 RBM46Q8TBY0 533 aaKnown RBP21.91■■□□□ 1.1
SMAD1-204ENST00000503324 XAGE2Q96GT9 111 aa21.91■■□□□ 1.1
SMAD1-204ENST00000503324 ADARB2Q9NS39 739 aaKnown RBP21.91■■□□□ 1.1
SMAD1-204ENST00000503324 IQSEC3Q9UPP2 1182 aaPredicted RBP21.91■■□□□ 1.1
SMAD1-204ENST00000503324 JAG2Q9Y219 1238 aa21.91■■□□□ 1.1
SMAD1-204ENST00000503324 MYO3BQ8WXR4 1341 aa21.9■■□□□ 1.1
SMAD1-204ENST00000503324 PHKA1P46020 1223 aa21.9■■□□□ 1.1
SMAD1-204ENST00000503324 FKBP1AP62942 108 aaKnown RBP21.9■■□□□ 1.1
SMAD1-204ENST00000503324 TNNI3KQ59H18 835 aa21.9■■□□□ 1.1
SMAD1-204ENST00000503324 FPGT-TNNI3KV9GXZ4 949 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms