RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CHRNDQ07001 517 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 LMBR1LQ6UX01 489 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 AGBL3Q8NEM8 1001 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 CDCA7LQ96GN5 454 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 ZNF594Q96JF6 807 aaPredicted RBP20.65■□□□□ 0.9
SCLT1-204ENST00000503215 LEMD3Q9Y2U8 911 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 CHMP3Q9Y3E7 222 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 ZNF804BA4D1E1 1349 aa20.65■□□□□ 0.9
SCLT1-204ENST00000503215 TAF5LO75529 589 aa20.64■□□□□ 0.89
SCLT1-204ENST00000503215 MRPL50Q8N5N7 158 aaKnown RBP20.64■□□□□ 0.89
SCLT1-204ENST00000503215 GGA3Q9NZ52 723 aa20.64■□□□□ 0.89
SCLT1-204ENST00000503215 USP17L8P0C7I0 530 aa20.63■□□□□ 0.89
SCLT1-204ENST00000503215 SLFN5Q08AF3 891 aa20.63■□□□□ 0.89
SCLT1-204ENST00000503215 SCARF1Q14162 830 aa20.63■□□□□ 0.89
SCLT1-204ENST00000503215 DACT2Q5SW24 774 aa20.63■□□□□ 0.89
SCLT1-204ENST00000503215 DCPSQ96C86 337 aaKnown RBP20.63■□□□□ 0.89
SCLT1-204ENST00000503215 ANKRD2Q9GZV1 360 aa20.63■□□□□ 0.89
SCLT1-204ENST00000503215 SCAF8Q9UPN6 1271 aaKnown RBP20.63■□□□□ 0.89
SCLT1-204ENST00000503215 LBX1P52954 281 aa20.62■□□□□ 0.89
SCLT1-204ENST00000503215 IFIT5Q13325 482 aaKnown RBP20.62■□□□□ 0.89
SCLT1-204ENST00000503215 FBXW7Q969H0 707 aa20.62■□□□□ 0.89
SCLT1-204ENST00000503215 AIDAQ96BJ3 306 aa20.62■□□□□ 0.89
SCLT1-204ENST00000503215 KAZALD1Q96I82 304 aa20.62■□□□□ 0.89
SCLT1-204ENST00000503215 COA1Q9GZY4 146 aa20.62■□□□□ 0.89
SCLT1-204ENST00000503215 C9orf78Q9NZ63 289 aaPredicted RBP20.62■□□□□ 0.89
SCLT1-204ENST00000503215 ZNF609O15014 1411 aa20.62■□□□□ 0.89
SCLT1-204ENST00000503215 ALDH1L1O75891 902 aa20.61■□□□□ 0.89
SCLT1-204ENST00000503215 ECE1P42892 770 aa20.61■□□□□ 0.89
SCLT1-204ENST00000503215 CTCFP49711 727 aaPredicted RBP20.61■□□□□ 0.89
SCLT1-204ENST00000503215 SSH1Q8WYL5 1049 aa20.61■□□□□ 0.89
SCLT1-204ENST00000503215 SUCLG2Q96I99 432 aa20.61■□□□□ 0.89
SCLT1-204ENST00000503215 SRCIN1Q9C0H9 1055 aa20.61■□□□□ 0.89
SCLT1-204ENST00000503215 MYOZ2Q9NPC6 264 aa20.61■□□□□ 0.89
SCLT1-204ENST00000503215 IRS2Q9Y4H2 1338 aa20.61■□□□□ 0.89
SCLT1-204ENST00000503215 E9PSI1 815 aa20.6■□□□□ 0.89
SCLT1-204ENST00000503215 CAPN15O75808 1086 aa20.6■□□□□ 0.89
SCLT1-204ENST00000503215 NBPF7P0C2Y1 421 aaPredicted RBP20.6■□□□□ 0.89
SCLT1-204ENST00000503215 ANGEL2Q5VTE6 544 aaKnown RBP20.6■□□□□ 0.89
SCLT1-204ENST00000503215 ZIC5Q96T25 663 aa20.6■□□□□ 0.89
SCLT1-204ENST00000503215 PSME4Q14997 1843 aa20.6■□□□□ 0.89
SCLT1-204ENST00000503215 HSPA8P11142 646 aaKnown RBP20.59■□□□□ 0.89
SCLT1-204ENST00000503215 KCNJ4P48050 445 aa20.59■□□□□ 0.89
SCLT1-204ENST00000503215 MAP2K1Q02750 393 aaPredicted RBP20.59■□□□□ 0.89
SCLT1-204ENST00000503215 HUNKP57058 714 aa20.59■□□□□ 0.89
SCLT1-204ENST00000503215 NBPF9Q3BBW0 867 aa20.59■□□□□ 0.89
SCLT1-204ENST00000503215 STRIP1Q5VSL9 837 aa20.59■□□□□ 0.89
SCLT1-204ENST00000503215 TTLL5Q6EMB2 1281 aa20.59■□□□□ 0.89
SCLT1-204ENST00000503215 SULF1Q8IWU6 871 aa20.59■□□□□ 0.89
SCLT1-204ENST00000503215 PLIN1O60240 522 aa20.58■□□□□ 0.88
SCLT1-204ENST00000503215 GTF2IP78347 998 aa20.58■□□□□ 0.88
SCLT1-204ENST00000503215 CDCA5Q96FF9 252 aa20.58■□□□□ 0.88
SCLT1-204ENST00000503215 HHIPL1Q96JK4 782 aa20.58■□□□□ 0.88
SCLT1-204ENST00000503215 GBA2Q9HCG7 927 aaPredicted RBP20.58■□□□□ 0.88
SCLT1-204ENST00000503215 CD209Q9NNX6 404 aa20.58■□□□□ 0.88
SCLT1-204ENST00000503215 PRDM10Q9NQV6 1147 aa20.58■□□□□ 0.88
SCLT1-204ENST00000503215 ZNF646O15015 1829 aaPredicted RBP20.57■□□□□ 0.88
SCLT1-204ENST00000503215 CCDC57Q2TAC2 916 aa20.57■□□□□ 0.88
SCLT1-204ENST00000503215 LDHAL6AQ6ZMR3 332 aa20.57■□□□□ 0.88
SCLT1-204ENST00000503215 PUS3Q9BZE2 481 aaKnown RBP20.57■□□□□ 0.88
SCLT1-204ENST00000503215 TSKSQ9UJT2 592 aa20.57■□□□□ 0.88
SCLT1-204ENST00000503215 THSD7BQ9C0I4 1608 aa20.56■□□□□ 0.88
SCLT1-204ENST00000503215 MAP2K2P36507 400 aa20.56■□□□□ 0.88
SCLT1-204ENST00000503215 TAF7LQ5H9L4 462 aa20.56■□□□□ 0.88
SCLT1-204ENST00000503215 PRAMEF18Q5VWM3 479 aa20.56■□□□□ 0.88
SCLT1-204ENST00000503215 TRMT2AQ8IZ69 625 aaKnown RBP20.56■□□□□ 0.88
SCLT1-204ENST00000503215 UTYO14607 1347 aa20.55■□□□□ 0.88
SCLT1-204ENST00000503215 KIAA0825Q8IV33 1275 aa20.55■□□□□ 0.88
SCLT1-204ENST00000503215 CERS5Q8N5B7 392 aa20.55■□□□□ 0.88
SCLT1-204ENST00000503215 CNNM1Q9NRU3 951 aa20.55■□□□□ 0.88
SCLT1-204ENST00000503215 WNT10BO00744 389 aa20.54■□□□□ 0.88
SCLT1-204ENST00000503215 SASH1O94885 1247 aa20.54■□□□□ 0.88
SCLT1-204ENST00000503215 C15orf52Q6ZUT6 534 aaKnown RBP20.54■□□□□ 0.88
SCLT1-204ENST00000503215 ANKRD44Q8N8A2 993 aa20.54■□□□□ 0.88
SCLT1-204ENST00000503215 C2orf69Q8N8R5 385 aa20.54■□□□□ 0.88
SCLT1-204ENST00000503215 BICC1Q9H694 974 aaKnown RBP20.54■□□□□ 0.88
SCLT1-204ENST00000503215 JAG2Q9Y219 1238 aa20.54■□□□□ 0.88
SCLT1-204ENST00000503215 FAM155AB1AL88 458 aaPredicted RBP20.53■□□□□ 0.88
SCLT1-204ENST00000503215 MOB2Q70IA6 237 aa20.53■□□□□ 0.88
SCLT1-204ENST00000503215 PTPRCP08575 1304 aa20.52■□□□□ 0.88
SCLT1-204ENST00000503215 CCER2I3L3R5 266 aa20.52■□□□□ 0.88
SCLT1-204ENST00000503215 RGMBQ6NW40 437 aa20.52■□□□□ 0.88
SCLT1-204ENST00000503215 OGFOD1Q8N543 542 aa20.52■□□□□ 0.88
SCLT1-204ENST00000503215 USP44Q9H0E7 712 aa20.52■□□□□ 0.88
SCLT1-204ENST00000503215 PCDHAC2Q9Y5I4 1007 aa20.52■□□□□ 0.88
SCLT1-204ENST00000503215 A0A1B0GUL6 1792 aa20.51■□□□□ 0.87
SCLT1-204ENST00000503215 MYO3BQ8WXR4 1341 aa20.51■□□□□ 0.87
SCLT1-204ENST00000503215 RABL6Q3YEC7 729 aaPredicted RBP20.51■□□□□ 0.87
SCLT1-204ENST00000503215 RIPOR2Q9Y4F9 1068 aa20.51■□□□□ 0.87
SCLT1-204ENST00000503215 PITPNM2Q9BZ72 1349 aa20.5■□□□□ 0.87
SCLT1-204ENST00000503215 IL1R1P14778 569 aa20.5■□□□□ 0.87
SCLT1-204ENST00000503215 LRRC24Q50LG9 513 aa20.5■□□□□ 0.87
SCLT1-204ENST00000503215 KLHDC4Q8TBB5 520 aa20.5■□□□□ 0.87
SCLT1-204ENST00000503215 ZBED3Q96IU2 234 aaPredicted RBP20.5■□□□□ 0.87
SCLT1-204ENST00000503215 BEGAINQ9BUH8 593 aa20.5■□□□□ 0.87
SCLT1-204ENST00000503215 F8W031 263 aaPredicted RBP20.49■□□□□ 0.87
SCLT1-204ENST00000503215 ZNF157P51786 506 aaPredicted RBP20.49■□□□□ 0.87
SCLT1-204ENST00000503215 BRPF1P55201 1214 aaPredicted RBP20.49■□□□□ 0.87
SCLT1-204ENST00000503215 SMC4Q9NTJ3 1288 aa20.49■□□□□ 0.87
SCLT1-204ENST00000503215 GYG1P46976 350 aa20.48■□□□□ 0.87
SCLT1-204ENST00000503215 NOGQ13253 232 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms