RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 USP16Q9Y5T5 823 aa28.67■■■□□ 2.18
DDX41-202ENST00000503078 A0A087WZG4 1122 aa28.66■■■□□ 2.18
DDX41-202ENST00000503078 RAPGEF4Q8WZA2 1011 aa28.66■■■□□ 2.18
DDX41-202ENST00000503078 CTNNA3Q9UI47 895 aa28.66■■■□□ 2.18
DDX41-202ENST00000503078 ERBB3P21860 1342 aa28.66■■■□□ 2.18
DDX41-202ENST00000503078 FSIP1Q8NA03 581 aa28.66■■■□□ 2.18
DDX41-202ENST00000503078 ZNF592Q92610 1267 aa28.66■■■□□ 2.18
DDX41-202ENST00000503078 USP27XA6NNY8 438 aa28.65■■■□□ 2.18
DDX41-202ENST00000503078 SNRPA1P09661 255 aaKnown RBP28.65■■■□□ 2.18
DDX41-202ENST00000503078 NYAP1Q6ZVC0 841 aa28.65■■■□□ 2.18
DDX41-202ENST00000503078 CEP57L1Q8IYX8 460 aa28.65■■■□□ 2.18
DDX41-202ENST00000503078 RGPD5Q99666 1765 aa28.65■■■□□ 2.18
DDX41-202ENST00000503078 CCDC69A6NI79 296 aa28.65■■■□□ 2.18
DDX41-202ENST00000503078 ME1P48163 572 aa28.65■■■□□ 2.18
DDX41-202ENST00000503078 PAG1Q9NWQ8 432 aa28.65■■■□□ 2.18
DDX41-202ENST00000503078 KIF1AQ12756 1690 aa28.64■■■□□ 2.18
DDX41-202ENST00000503078 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP28.64■■■□□ 2.18
DDX41-202ENST00000503078 ATP5J2-PTCD1G3V325 749 aa28.64■■■□□ 2.18
DDX41-202ENST00000503078 GOLIM4O00461 696 aa28.64■■■□□ 2.18
DDX41-202ENST00000503078 PTCD1O75127 700 aaKnown RBP28.64■■■□□ 2.18
DDX41-202ENST00000503078 PHKG2P15735 406 aa28.64■■■□□ 2.18
DDX41-202ENST00000503078 PIP4K2AP48426 406 aaPredicted RBP28.64■■■□□ 2.18
DDX41-202ENST00000503078 NAA30Q147X3 362 aaPredicted RBP28.64■■■□□ 2.18
DDX41-202ENST00000503078 PTPN14Q15678 1187 aa28.64■■■□□ 2.18
DDX41-202ENST00000503078 NCOA5Q9HCD5 579 aaKnown RBP28.64■■■□□ 2.18
DDX41-202ENST00000503078 E7EWF7 191 aa28.64■■■□□ 2.17
DDX41-202ENST00000503078 CASP7P55210 303 aa28.64■■■□□ 2.17
DDX41-202ENST00000503078 CCZ1BP86790 482 aa28.64■■■□□ 2.17
DDX41-202ENST00000503078 CCZ1P86791 482 aaPredicted RBP28.64■■■□□ 2.17
DDX41-202ENST00000503078 KRT28Q7Z3Y7 464 aa28.64■■■□□ 2.17
DDX41-202ENST00000503078 FILIP1Q7Z7B0 1213 aa28.64■■■□□ 2.17
DDX41-202ENST00000503078 ILDR1Q86SU0 546 aaPredicted RBP28.64■■■□□ 2.17
DDX41-202ENST00000503078 TICAM2Q86XR7 235 aa28.64■■■□□ 2.17
DDX41-202ENST00000503078 ZNF274Q96GC6 653 aaPredicted RBP28.64■■■□□ 2.17
DDX41-202ENST00000503078 CCDC9Q9Y3X0 531 aaKnown RBP28.64■■■□□ 2.17
DDX41-202ENST00000503078 NAT10Q9H0A0 1025 aaKnown RBP28.63■■■□□ 2.17
DDX41-202ENST00000503078 DNAJC5Q9H3Z4 198 aa28.63■■■□□ 2.17
DDX41-202ENST00000503078 ARFGEF2Q9Y6D5 1785 aa28.63■■■□□ 2.17
DDX41-202ENST00000503078 A0A087WWV3 80 aa28.62■■■□□ 2.17
DDX41-202ENST00000503078 PDIA3P30101 505 aaKnown RBP28.62■■■□□ 2.17
DDX41-202ENST00000503078 ZMYM1Q5SVZ6 1142 aa28.62■■■□□ 2.17
DDX41-202ENST00000503078 CHMP4CQ96CF2 233 aa28.62■■■□□ 2.17
DDX41-202ENST00000503078 SLFNL1Q499Z3 407 aa28.62■■■□□ 2.17
DDX41-202ENST00000503078 LMBR1LQ6UX01 489 aa28.62■■■□□ 2.17
DDX41-202ENST00000503078 NAP1L2Q9ULW6 460 aaPredicted RBP28.62■■■□□ 2.17
DDX41-202ENST00000503078 GUCY1B3Q02153 619 aa28.61■■■□□ 2.17
DDX41-202ENST00000503078 TTC5Q8N0Z6 440 aa28.61■■■□□ 2.17
DDX41-202ENST00000503078 AOPEPQ8N6M6 819 aa28.61■■■□□ 2.17
DDX41-202ENST00000503078 NEUROD6Q96NK8 337 aa28.61■■■□□ 2.17
DDX41-202ENST00000503078 HSPD1P10809 573 aaKnown RBP28.61■■■□□ 2.17
DDX41-202ENST00000503078 FMR1NBQ8N0W7 255 aaPredicted RBP28.61■■■□□ 2.17
DDX41-202ENST00000503078 MRPS27Q92552 414 aaKnown RBP28.61■■■□□ 2.17
DDX41-202ENST00000503078 CARMIL3Q8ND23 1372 aa28.6■■■□□ 2.17
DDX41-202ENST00000503078 KIF20AO95235 890 aa28.6■■■□□ 2.17
DDX41-202ENST00000503078 KCND1Q9NSA2 647 aa28.6■■■□□ 2.17
DDX41-202ENST00000503078 PCDHA7Q9UN72 937 aa28.6■■■□□ 2.17
DDX41-202ENST00000503078 MST1RQ04912 1400 aa28.59■■■□□ 2.17
DDX41-202ENST00000503078 A0A0G2JLW4 131 aa28.59■■■□□ 2.17
DDX41-202ENST00000503078 TATP17735 454 aaPredicted RBP28.59■■■□□ 2.17
DDX41-202ENST00000503078 RTEL1Q9NZ71 1219 aa28.59■■■□□ 2.17
DDX41-202ENST00000503078 GSDMDP57764 484 aa28.59■■■□□ 2.17
DDX41-202ENST00000503078 ADALQ6DHV7 355 aa28.59■■■□□ 2.17
DDX41-202ENST00000503078 CCAR2Q8N163 923 aaKnown RBP28.59■■■□□ 2.17
DDX41-202ENST00000503078 GPR108Q9NPR9 543 aa28.59■■■□□ 2.17
DDX41-202ENST00000503078 DDX41Q9UJV9 622 aaKnown RBP28.59■■■□□ 2.17
DDX41-202ENST00000503078 PPFIA3O75145 1194 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 ATG9AQ7Z3C6 839 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 PLBD2Q8NHP8 589 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 FMNL2Q96PY5 1086 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 ABCC6O95255 1503 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 A0A1W2PQ27 194 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 A0A1W2PQ64 194 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 A0A1W2PQD8 194 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 FOXO4P98177 505 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 IFNL2Q8IZJ0 200 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 ERCC4Q92889 916 aaPredicted RBP28.58■■■□□ 2.17
DDX41-202ENST00000503078 SDF4Q9BRK5 362 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 NLRP2Q9NX02 1062 aa28.58■■■□□ 2.17
DDX41-202ENST00000503078 MAST3O60307 1309 aa28.57■■■□□ 2.16
DDX41-202ENST00000503078 FDPSP14324 419 aaKnown RBP28.57■■■□□ 2.16
DDX41-202ENST00000503078 CHST3Q7LGC8 479 aa28.57■■■□□ 2.16
DDX41-202ENST00000503078 OSBPL5Q9H0X9 879 aaPredicted RBP28.57■■■□□ 2.16
DDX41-202ENST00000503078 TIMM10P62072 90 aa28.56■■■□□ 2.16
DDX41-202ENST00000503078 TRMT1Q9NXH9 659 aaKnown RBP28.56■■■□□ 2.16
DDX41-202ENST00000503078 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.56■■■□□ 2.163e-6■■■■□ 26.5
DDX41-202ENST00000503078 IMPACTQ9P2X3 320 aa28.56■■■□□ 2.16
DDX41-202ENST00000503078 ZNF215Q9UL58 517 aaPredicted RBP28.56■■■□□ 2.16
DDX41-202ENST00000503078 FBXL16Q8N461 479 aa28.55■■■□□ 2.16
DDX41-202ENST00000503078 RNF113AO15541 343 aaKnown RBP28.55■■■□□ 2.16
DDX41-202ENST00000503078 ZC3H6P61129 1189 aaKnown RBP28.55■■■□□ 2.16
DDX41-202ENST00000503078 NBPF11Q86T75 865 aa28.55■■■□□ 2.16
DDX41-202ENST00000503078 A0A1B0GVL5 298 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 H7C1W4 665 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 EVCP57679 992 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 KIF18AQ8NI77 898 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 FBXW7Q969H0 707 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 ALS2Q96Q42 1657 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 TMEM94Q12767 1356 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 NDUFA8P51970 172 aa28.54■■■□□ 2.16
DDX41-202ENST00000503078 LINC00301Q8NCQ3 95 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms