RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 ANKRD2Q9GZV1 360 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 ZNF408Q9H9D4 720 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 GGA3Q9NZ52 723 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 MINPP1Q9UNW1 487 aa7.84□□□□□ -1.15
LSM3P4-201ENST00000502948 ADM5C9JUS6 153 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 CASP7P55210 303 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 KIF23Q02241 960 aaPredicted RBP7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 GRM1Q13255 1194 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 GCKRQ14397 625 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 PKN2Q16513 984 aaKnown RBP7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 TWISTNBQ3B726 338 aaPredicted RBP7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 RTL5Q5HYW3 569 aaPredicted RBP7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 DACT2Q5SW24 774 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 ANGEL2Q5VTE6 544 aaKnown RBP7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 OGFOD1Q8N543 542 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 MTMR14Q8NCE2 650 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 ZBED3Q96IU2 234 aaPredicted RBP7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 CSRNP1Q96S65 589 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 ZIC5Q96T25 663 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 MYH16Q9H6N6 1097 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 RNF186Q9NXI6 227 aa7.83□□□□□ -1.16
LSM3P4-201ENST00000502948 ELL2O00472 640 aaPredicted RBP7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 WNT10BO00744 389 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 SLC34A2O95436 690 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 IGHMBP2P38935 993 aaKnown RBP7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 TM4SF4P48230 202 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 FKBP1AP62942 108 aaKnown RBP7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 DGKZQ13574 1117 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 RBM26Q5T8P6 1007 aaKnown RBP7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 RASAL3Q86YV0 1011 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 WDR63Q8IWG1 891 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 PIAS4Q8N2W9 510 aaPredicted RBP7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 TSPYL6Q8N831 410 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 LINS1Q8NG48 757 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 GREM2Q9H772 168 aa7.82□□□□□ -1.16
LSM3P4-201ENST00000502948 ZNF804BA4D1E1 1349 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 IRS2Q9Y4H2 1338 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 CCDC85CA6NKD9 419 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 SLC4A2P04920 1241 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 INHBEP58166 350 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 FLIIQ13045 1269 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 MAP3K11Q16584 847 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 FAM161AQ3B820 660 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 APOBEC3FQ8IUX4 373 aaKnown RBP7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 TSKSQ9UJT2 592 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 HDAC9Q9UKV0 1011 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 PPP2R3BQ9Y5P8 575 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 ARAP2Q8WZ64 1704 aa7.81□□□□□ -1.16
LSM3P4-201ENST00000502948 ASTN2O75129 1339 aaPredicted RBP7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 ITGA6P23229 1130 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 NF2P35240 595 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 CWF19L2Q2TBE0 894 aaKnown RBP7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 NBPF9Q3BBW0 867 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 LDLRAD1Q5T700 205 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 TTLL5Q6EMB2 1281 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 DLK2Q6UY11 383 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 UBE3BQ7Z3V4 1068 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 CTU1Q7Z7A3 348 aaKnown RBP7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 DNAAF4Q8WXU2 420 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 MPHOSPH8Q99549 860 aa7.8□□□□□ -1.16
LSM3P4-201ENST00000502948 RBBP6Q7Z6E9 1792 aaKnown RBP7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 VAMP4O75379 141 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 TRPA1O75762 1119 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 ALDH1A1P00352 501 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 IL1R1P14778 569 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 SREBF2Q12772 1141 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 TXNRD3Q86VQ6 643 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 ZNF428Q96B54 188 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 CD209Q9NNX6 404 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 PCDH10Q9P2E7 1040 aa7.79□□□□□ -1.16
LSM3P4-201ENST00000502948 FANCIQ9NVI1 1328 aa7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 ANKRD18BA2A2Z9 1011 aa7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 ZBTB48P10074 688 aaPredicted RBP7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 CHRNDQ07001 517 aa7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 FKBP5Q13451 457 aaPredicted RBP7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 BEND3Q5T5X7 828 aa7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 G2E3Q7L622 706 aa7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 ARMC9Q7Z3E5 817 aa7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 TSR2Q969E8 191 aaKnown RBP7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 CCDC85AQ96PX6 553 aaPredicted RBP7.78□□□□□ -1.16
LSM3P4-201ENST00000502948 WTIPA6NIX2 430 aaPredicted RBP7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 ALDH1L1O75891 902 aa7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 SASH1O94885 1247 aa7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 FOXO4P98177 505 aa7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 IFIT5Q13325 482 aaKnown RBP7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 ZNF804AQ7Z570 1209 aa7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 JARID2Q92833 1246 aaPredicted RBP7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 UTYO14607 1347 aa7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 FAM205AQ6ZU69 1335 aa7.77□□□□□ -1.17
LSM3P4-201ENST00000502948 TNRC18O15417 2968 aaPredicted RBP7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 TESPA1A2RU30 521 aaPredicted RBP7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 MANSC4A6NHS7 340 aaPredicted RBP7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 UBE2Q2LH0YL09 131 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 GPR25O00155 361 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 GRM8O00222 908 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 MYO1BO43795 1136 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 PPP1R12BO60237 982 aaPredicted RBP7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 KCNJ4P48050 445 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 GTF2IP78347 998 aa7.76□□□□□ -1.17
LSM3P4-201ENST00000502948 UBE4AQ14139 1066 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms