RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 COA1Q9GZY4 146 aa31.18■■■□□ 2.58
LSM6-202ENST00000502781 GPBP1L1Q9HC44 474 aaPredicted RBP31.18■■■□□ 2.58
LSM6-202ENST00000502781 CEP126Q9P2H0 1117 aa31.17■■■□□ 2.58
LSM6-202ENST00000502781 NOP58Q9Y2X3 529 aaKnown RBP31.17■■■□□ 2.58
LSM6-202ENST00000502781 PUM3Q15397 648 aaKnown RBP31.17■■■□□ 2.58
LSM6-202ENST00000502781 CRBNQ96SW2 442 aa31.17■■■□□ 2.58
LSM6-202ENST00000502781 CIAPIN1Q6FI81 312 aa31.16■■■□□ 2.58
LSM6-202ENST00000502781 KCNQ5Q9NR82 932 aa31.16■■■□□ 2.58
LSM6-202ENST00000502781 G3V3G9 751 aa31.15■■■□□ 2.58
LSM6-202ENST00000502781 DCAF8Q5TAQ9 597 aa31.15■■■□□ 2.58
LSM6-202ENST00000502781 NMRK2Q9NPI5 230 aa31.15■■■□□ 2.58
LSM6-202ENST00000502781 WDR90Q96KV7 1748 aa31.14■■■□□ 2.58
LSM6-202ENST00000502781 POTECB2RU33 542 aa31.14■■■□□ 2.58
LSM6-202ENST00000502781 RAD17O75943 681 aa31.14■■■□□ 2.58
LSM6-202ENST00000502781 G3BP1Q13283 466 aaKnown RBP eCLIP31.14■■■□□ 2.58
LSM6-202ENST00000502781 TNIP1Q15025 636 aa31.13■■■□□ 2.57
LSM6-202ENST00000502781 LPIN2Q92539 896 aa31.13■■■□□ 2.57
LSM6-202ENST00000502781 FAM84BQ96KN1 310 aaPredicted RBP31.13■■■□□ 2.57
LSM6-202ENST00000502781 CD209Q9NNX6 404 aa31.13■■■□□ 2.57
LSM6-202ENST00000502781 SCN9AQ15858 1988 aa31.12■■■□□ 2.57
LSM6-202ENST00000502781 SURF6O75683 361 aaKnown RBP31.12■■■□□ 2.57
LSM6-202ENST00000502781 SASH1O94885 1247 aa31.12■■■□□ 2.57
LSM6-202ENST00000502781 PSMD14O00487 310 aa31.11■■■□□ 2.57
LSM6-202ENST00000502781 HMMRO75330 724 aa31.11■■■□□ 2.57
LSM6-202ENST00000502781 TFCP2Q12800 502 aa31.11■■■□□ 2.57
LSM6-202ENST00000502781 ZNF804AQ7Z570 1209 aa31.11■■■□□ 2.57
LSM6-202ENST00000502781 GJA3Q9Y6H8 435 aa31.11■■■□□ 2.57
LSM6-202ENST00000502781 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP31.11■■■□□ 2.57
LSM6-202ENST00000502781 VIL1P09327 827 aaKnown RBP31.1■■■□□ 2.57
LSM6-202ENST00000502781 IFIT1P09914 478 aaKnown RBP31.1■■■□□ 2.57
LSM6-202ENST00000502781 IL1R1P14778 569 aa31.1■■■□□ 2.57
LSM6-202ENST00000502781 FBXO33Q7Z6M2 555 aa31.1■■■□□ 2.57
LSM6-202ENST00000502781 RRAGCQ9HB90 399 aa31.1■■■□□ 2.57
LSM6-202ENST00000502781 GYG1P46976 350 aa31.09■■■□□ 2.57
LSM6-202ENST00000502781 ATP2B3Q16720 1220 aa31.09■■■□□ 2.57
LSM6-202ENST00000502781 KIF3CO14782 793 aa31.08■■■□□ 2.57
LSM6-202ENST00000502781 SLC5A1P13866 664 aa31.08■■■□□ 2.57
LSM6-202ENST00000502781 VEGFAP15692 232 aaPredicted RBP31.08■■■□□ 2.57
LSM6-202ENST00000502781 HIBADHP31937 336 aaKnown RBP31.08■■■□□ 2.57
LSM6-202ENST00000502781 SCNN1DP51172 638 aa31.08■■■□□ 2.57
LSM6-202ENST00000502781 AKAP2Q9Y2D5 859 aa31.07■■■□□ 2.56
LSM6-202ENST00000502781 ZNF609O15014 1411 aa31.07■■■□□ 2.56
LSM6-202ENST00000502781 USP17L3A6NCW0 530 aa31.06■■■□□ 2.56
LSM6-202ENST00000502781 USP17L4A6NCW7 530 aa31.06■■■□□ 2.56
LSM6-202ENST00000502781 AAMPQ13685 434 aa31.06■■■□□ 2.56
LSM6-202ENST00000502781 STRIP1Q5VSL9 837 aa31.06■■■□□ 2.56
LSM6-202ENST00000502781 USP17L1Q7RTZ2 530 aa31.06■■■□□ 2.56
LSM6-202ENST00000502781 TDRD7Q8NHU6 1098 aaKnown RBP31.06■■■□□ 2.56
LSM6-202ENST00000502781 PCDHB15Q9Y5E8 787 aa31.06■■■□□ 2.56
LSM6-202ENST00000502781 CAVIN4Q5BKX8 364 aa31.05■■■□□ 2.56
LSM6-202ENST00000502781 GPR108Q9NPR9 543 aa31.05■■■□□ 2.56
LSM6-202ENST00000502781 IQCA1LA6NCM1 817 aa31.05■■■□□ 2.56
LSM6-202ENST00000502781 GMPSP49915 693 aaPredicted RBP31.05■■■□□ 2.56
LSM6-202ENST00000502781 DACT2Q5SW24 774 aa31.05■■■□□ 2.56
LSM6-202ENST00000502781 DPF2Q92785 391 aa31.05■■■□□ 2.56
LSM6-202ENST00000502781 EXOC6BQ9Y2D4 811 aa31.05■■■□□ 2.56
LSM6-202ENST00000502781 PSME4Q14997 1843 aa31.04■■■□□ 2.56
LSM6-202ENST00000502781 A0A1B0GUL7 405 aa31.04■■■□□ 2.56
LSM6-202ENST00000502781 RPS12P25398 132 aaKnown RBP31.04■■■□□ 2.56
LSM6-202ENST00000502781 BCAMP50895 628 aa31.04■■■□□ 2.56
LSM6-202ENST00000502781 OS9Q13438 667 aaPredicted RBP31.04■■■□□ 2.56
LSM6-202ENST00000502781 HSP90AB4PQ58FF6 505 aa31.04■■■□□ 2.56
LSM6-202ENST00000502781 ZBTB12Q9Y330 459 aaPredicted RBP31.04■■■□□ 2.56
LSM6-202ENST00000502781 TIMM10P62072 90 aa31.03■■■□□ 2.56
LSM6-202ENST00000502781 RSBN1LQ6PCB5 846 aaPredicted RBP31.03■■■□□ 2.56
LSM6-202ENST00000502781 GMLQ99445 158 aa31.03■■■□□ 2.56
LSM6-202ENST00000502781 GPRC5DQ9NZD1 345 aa31.03■■■□□ 2.56
LSM6-202ENST00000502781 HACL1Q9UJ83 578 aa31.03■■■□□ 2.56
LSM6-202ENST00000502781 SCN4AP35499 1836 aa31.02■■■□□ 2.56
LSM6-202ENST00000502781 TTLL5Q6EMB2 1281 aa31.02■■■□□ 2.56
LSM6-202ENST00000502781 ERC1Q8IUD2 1116 aa31.02■■■□□ 2.56
LSM6-202ENST00000502781 AGBL3Q8NEM8 1001 aa31.02■■■□□ 2.56
LSM6-202ENST00000502781 ZNF646O15015 1829 aaPredicted RBP31.01■■■□□ 2.55
LSM6-202ENST00000502781 ZBTB22O15209 634 aa31.01■■■□□ 2.55
LSM6-202ENST00000502781 GTF2IP78347 998 aa31.01■■■□□ 2.55
LSM6-202ENST00000502781 VPS37DQ86XT2 251 aa31.01■■■□□ 2.55
LSM6-202ENST00000502781 EXOC6Q8TAG9 804 aa31.01■■■□□ 2.55
LSM6-202ENST00000502781 TAF1DQ9H5J8 278 aaPredicted RBP31.01■■■□□ 2.55
LSM6-202ENST00000502781 ADORA1P30542 326 aa31■■■□□ 2.55
LSM6-202ENST00000502781 EPS15P42566 896 aa31■■■□□ 2.55
LSM6-202ENST00000502781 FAM205AQ6ZU69 1335 aa31■■■□□ 2.55
LSM6-202ENST00000502781 LMOD1P29536 600 aaPredicted RBP30.99■■■□□ 2.55
LSM6-202ENST00000502781 TNNI3KQ59H18 835 aa30.99■■■□□ 2.55
LSM6-202ENST00000502781 FPGT-TNNI3KV9GXZ4 949 aa30.99■■■□□ 2.55
LSM6-202ENST00000502781 ARAP2Q8WZ64 1704 aa30.99■■■□□ 2.55
LSM6-202ENST00000502781 EPHX2P34913 555 aa30.98■■■□□ 2.55
LSM6-202ENST00000502781 XAGE2Q96GT9 111 aa30.98■■■□□ 2.55
LSM6-202ENST00000502781 MYO3BQ8WXR4 1341 aa30.97■■■□□ 2.55
LSM6-202ENST00000502781 RAB11FIP3O75154 756 aa30.97■■■□□ 2.55
LSM6-202ENST00000502781 FKBP1AP62942 108 aaKnown RBP30.97■■■□□ 2.55
LSM6-202ENST00000502781 RHPN1Q8TCX5 695 aa30.97■■■□□ 2.55
LSM6-202ENST00000502781 CCDC102BQ68D86 513 aa30.96■■■□□ 2.55
LSM6-202ENST00000502781 MXD3Q9BW11 206 aa30.96■■■□□ 2.55
LSM6-202ENST00000502781 DCTPP1Q9H773 170 aa30.96■■■□□ 2.55
LSM6-202ENST00000502781 CNOT7Q9UIV1 285 aaKnown RBP30.96■■■□□ 2.55
LSM6-202ENST00000502781 PHKA1P46020 1223 aa30.95■■■□□ 2.55
LSM6-202ENST00000502781 MICALL2Q8IY33 904 aa30.95■■■□□ 2.55
LSM6-202ENST00000502781 CERS5Q8N5B7 392 aa30.95■■■□□ 2.55
LSM6-202ENST00000502781 NEUROD6Q96NK8 337 aa30.95■■■□□ 2.55
LSM6-202ENST00000502781 IQSEC3Q9UPP2 1182 aaPredicted RBP30.95■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms