RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 WDR33Q9C0J8 1336 aaKnown RBP28.83■■■□□ 2.21
TNFRSF25-216ENST00000502588 CYP4F22Q6NT55 531 aa28.82■■■□□ 2.2
TNFRSF25-216ENST00000502588 PODNQ7Z5L7 613 aa28.82■■■□□ 2.2
TNFRSF25-216ENST00000502588 KAZALD1Q96I82 304 aa28.82■■■□□ 2.2
TNFRSF25-216ENST00000502588 SUCLG2Q96I99 432 aa28.82■■■□□ 2.2
TNFRSF25-216ENST00000502588 C9orf78Q9NZ63 289 aaPredicted RBP28.82■■■□□ 2.2
TNFRSF25-216ENST00000502588 LEMD3Q9Y2U8 911 aa28.82■■■□□ 2.2
TNFRSF25-216ENST00000502588 USP17L3A6NCW0 530 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 USP17L4A6NCW7 530 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 ADM5C9JUS6 153 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 CCER2I3L3R5 266 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 FOXN1O15353 648 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 TAF5LO75529 589 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 IFIT5Q13325 482 aaKnown RBP28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 USP17L1Q7RTZ2 530 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 ANKRD2Q9GZV1 360 aa28.81■■■□□ 2.2
TNFRSF25-216ENST00000502588 IRS2Q9Y4H2 1338 aa28.8■■■□□ 2.2
TNFRSF25-216ENST00000502588 NBPF7P0C2Y1 421 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF25-216ENST00000502588 ZNF280AP59817 542 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF25-216ENST00000502588 GRM1Q13255 1194 aa28.8■■■□□ 2.2
TNFRSF25-216ENST00000502588 PAXIP1Q6ZW49 1069 aaPredicted RBP28.8■■■□□ 2.2
TNFRSF25-216ENST00000502588 AGBL3Q8NEM8 1001 aa28.8■■■□□ 2.2
TNFRSF25-216ENST00000502588 DACT2Q5SW24 774 aa28.79■■■□□ 2.2
TNFRSF25-216ENST00000502588 CAPNS2Q96L46 248 aa28.79■■■□□ 2.2
TNFRSF25-216ENST00000502588 GGA3Q9NZ52 723 aa28.79■■■□□ 2.2
TNFRSF25-216ENST00000502588 KRT26Q7Z3Y9 468 aa28.78■■■□□ 2.2
TNFRSF25-216ENST00000502588 SAPCD2Q86UD0 394 aa28.78■■■□□ 2.2
TNFRSF25-216ENST00000502588 TRMT2AQ8IZ69 625 aaKnown RBP28.78■■■□□ 2.2
TNFRSF25-216ENST00000502588 FBXW7Q969H0 707 aa28.78■■■□□ 2.2
TNFRSF25-216ENST00000502588 COA1Q9GZY4 146 aa28.78■■■□□ 2.2
TNFRSF25-216ENST00000502588 USP17L8P0C7I0 530 aa28.76■■■□□ 2.19
TNFRSF25-216ENST00000502588 KCNJ4P48050 445 aa28.76■■■□□ 2.19
TNFRSF25-216ENST00000502588 WBP1LQ9NX94 342 aa28.76■■■□□ 2.19
TNFRSF25-216ENST00000502588 UTYO14607 1347 aa28.75■■■□□ 2.19
TNFRSF25-216ENST00000502588 PTPRCP08575 1304 aa28.75■■■□□ 2.19
TNFRSF25-216ENST00000502588 CCDC57Q2TAC2 916 aa28.75■■■□□ 2.19
TNFRSF25-216ENST00000502588 DCPSQ96C86 337 aaKnown RBP28.75■■■□□ 2.19
TNFRSF25-216ENST00000502588 MYOZ2Q9NPC6 264 aa28.75■■■□□ 2.19
TNFRSF25-216ENST00000502588 SCARF1Q14162 830 aa28.74■■■□□ 2.19
TNFRSF25-216ENST00000502588 SCAF8Q9UPN6 1271 aaKnown RBP28.74■■■□□ 2.19
TNFRSF25-216ENST00000502588 AOC2O75106 756 aa28.73■■■□□ 2.19
TNFRSF25-216ENST00000502588 ANGEL2Q5VTE6 544 aaKnown RBP28.73■■■□□ 2.19
TNFRSF25-216ENST00000502588 PUS3Q9BZE2 481 aaKnown RBP28.73■■■□□ 2.19
TNFRSF25-216ENST00000502588 PLIN1O60240 522 aa28.72■■■□□ 2.19
TNFRSF25-216ENST00000502588 TAF7LQ5H9L4 462 aa28.72■■■□□ 2.19
TNFRSF25-216ENST00000502588 STRIP1Q5VSL9 837 aa28.72■■■□□ 2.19
TNFRSF25-216ENST00000502588 LDHAL6AQ6ZMR3 332 aa28.72■■■□□ 2.19
TNFRSF25-216ENST00000502588 BICC1Q9H694 974 aaKnown RBP28.72■■■□□ 2.19
TNFRSF25-216ENST00000502588 GTF2IP78347 998 aa28.71■■■□□ 2.19
TNFRSF25-216ENST00000502588 ANKRD44Q8N8A2 993 aa28.71■■■□□ 2.19
TNFRSF25-216ENST00000502588 CD209Q9NNX6 404 aa28.71■■■□□ 2.19
TNFRSF25-216ENST00000502588 CNNM1Q9NRU3 951 aa28.71■■■□□ 2.19
TNFRSF25-216ENST00000502588 SMC4Q9NTJ3 1288 aa28.71■■■□□ 2.19
TNFRSF25-216ENST00000502588 ECE1P42892 770 aa28.7■■■□□ 2.18
TNFRSF25-216ENST00000502588 TTLL5Q6EMB2 1281 aa28.7■■■□□ 2.18
TNFRSF25-216ENST00000502588 NBPF9Q3BBW0 867 aa28.69■■■□□ 2.18
TNFRSF25-216ENST00000502588 ALDH1L2Q3SY69 923 aa28.69■■■□□ 2.18
TNFRSF25-216ENST00000502588 C15orf52Q6ZUT6 534 aaKnown RBP28.69■■■□□ 2.18
TNFRSF25-216ENST00000502588 ECM29Q5VYK3 1845 aa28.69■■■□□ 2.18
TNFRSF25-216ENST00000502588 RABL6Q3YEC7 729 aaPredicted RBP28.68■■■□□ 2.18
TNFRSF25-216ENST00000502588 SULF1Q8IWU6 871 aa28.68■■■□□ 2.18
TNFRSF25-216ENST00000502588 AIDAQ96BJ3 306 aa28.68■■■□□ 2.18
TNFRSF25-216ENST00000502588 CDCA5Q96FF9 252 aa28.68■■■□□ 2.18
TNFRSF25-216ENST00000502588 USP44Q9H0E7 712 aa28.68■■■□□ 2.18
TNFRSF25-216ENST00000502588 HUNKP57058 714 aa28.67■■■□□ 2.18
TNFRSF25-216ENST00000502588 KIAA0825Q8IV33 1275 aa28.67■■■□□ 2.18
TNFRSF25-216ENST00000502588 TNS4Q8IZW8 715 aa28.67■■■□□ 2.18
TNFRSF25-216ENST00000502588 CERS5Q8N5B7 392 aa28.67■■■□□ 2.18
TNFRSF25-216ENST00000502588 MYO3BQ8WXR4 1341 aa28.67■■■□□ 2.18
TNFRSF25-216ENST00000502588 ARAP2Q8WZ64 1704 aa28.66■■■□□ 2.18
TNFRSF25-216ENST00000502588 SASH1O94885 1247 aa28.66■■■□□ 2.18
TNFRSF25-216ENST00000502588 HHIPL1Q96JK4 782 aa28.66■■■□□ 2.18
TNFRSF25-216ENST00000502588 GBA2Q9HCG7 927 aaPredicted RBP28.66■■■□□ 2.18
TNFRSF25-216ENST00000502588 JAG2Q9Y219 1238 aa28.66■■■□□ 2.18
TNFRSF25-216ENST00000502588 HSPA8P11142 646 aaKnown RBP28.65■■■□□ 2.18
TNFRSF25-216ENST00000502588 CTCFP49711 727 aaPredicted RBP28.65■■■□□ 2.18
TNFRSF25-216ENST00000502588 LBX1P52954 281 aa28.65■■■□□ 2.18
TNFRSF25-216ENST00000502588 ZIC5Q96T25 663 aa28.65■■■□□ 2.18
TNFRSF25-216ENST00000502588 WNT10BO00744 389 aa28.64■■■□□ 2.18
TNFRSF25-216ENST00000502588 MAP2K1Q02750 393 aaPredicted RBP28.64■■■□□ 2.18
TNFRSF25-216ENST00000502588 KLHDC4Q8TBB5 520 aa28.64■■■□□ 2.18
TNFRSF25-216ENST00000502588 IL1R1P14778 569 aa28.63■■■□□ 2.17
TNFRSF25-216ENST00000502588 LRRC24Q50LG9 513 aa28.63■■■□□ 2.17
TNFRSF25-216ENST00000502588 PRAMEF18Q5VWM3 479 aa28.63■■■□□ 2.17
TNFRSF25-216ENST00000502588 NOB1Q9ULX3 412 aaKnown RBP28.63■■■□□ 2.17
TNFRSF25-216ENST00000502588 RIPOR2Q9Y4F9 1068 aa28.63■■■□□ 2.17
TNFRSF25-216ENST00000502588 PITPNM2Q9BZ72 1349 aa28.63■■■□□ 2.17
TNFRSF25-216ENST00000502588 PAPPA2Q9BXP8 1791 aa28.62■■■□□ 2.17
TNFRSF25-216ENST00000502588 ZNF804AQ7Z570 1209 aa28.62■■■□□ 2.17
TNFRSF25-216ENST00000502588 MIER1Q8N108 512 aa28.62■■■□□ 2.17
TNFRSF25-216ENST00000502588 OGFOD1Q8N543 542 aa28.62■■■□□ 2.17
TNFRSF25-216ENST00000502588 TSKSQ9UJT2 592 aa28.61■■■□□ 2.17
TNFRSF25-216ENST00000502588 PCDHAC2Q9Y5I4 1007 aa28.61■■■□□ 2.17
TNFRSF25-216ENST00000502588 MAP2K2P36507 400 aa28.6■■■□□ 2.17
TNFRSF25-216ENST00000502588 GYG1P46976 350 aa28.6■■■□□ 2.17
TNFRSF25-216ENST00000502588 C2orf69Q8N8R5 385 aa28.6■■■□□ 2.17
TNFRSF25-216ENST00000502588 PRDM10Q9NQV6 1147 aa28.6■■■□□ 2.17
TNFRSF25-216ENST00000502588 FAM155AB1AL88 458 aaPredicted RBP28.59■■■□□ 2.17
TNFRSF25-216ENST00000502588 ZBED3Q96IU2 234 aaPredicted RBP28.59■■■□□ 2.17
TNFRSF25-216ENST00000502588 F8W031 263 aaPredicted RBP28.58■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms