RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 NBPF9Q3BBW0 867 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 PUS10Q3MIT2 529 aaKnown RBP4.59□□□□□ -1.68
SUB1-202ENST00000502453 KRT26Q7Z3Y9 468 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 ANKRD23Q86SG2 305 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 MPNDQ8N594 471 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 RASGRP4Q8TDF6 673 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 CSRNP1Q96S65 589 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 PRKAG3Q9UGI9 489 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 CHMP3Q9Y3E7 222 aa4.59□□□□□ -1.68
SUB1-202ENST00000502453 PIP5K1CO60331 668 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 USP17L7P0C7H9 530 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 IRS1P35568 1242 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 PTK2Q05397 1052 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 ALFQ53S48 1182 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 TBCELQ5QJ74 424 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 RNF20Q5VTR2 975 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 USPL1Q5W0Q7 1092 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 RETREG3Q86VR2 466 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 MSL3Q8N5Y2 521 aaKnown RBP4.58□□□□□ -1.68
SUB1-202ENST00000502453 ALKBH8Q96BT7 664 aaKnown RBP4.58□□□□□ -1.68
SUB1-202ENST00000502453 OSBPL7Q9BZF2 842 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 MUC3BQ9H195 1237 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 ADAMTS1Q9UHI8 967 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 KDM2BQ8NHM5 1336 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 RNF40O75150 1001 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 ST13P50502 369 aaKnown RBP4.58□□□□□ -1.68
SUB1-202ENST00000502453 NEK2P51955 445 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 MAATS1Q7Z4T9 603 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 DZIP3Q86Y13 1208 aaKnown RBP4.58□□□□□ -1.68
SUB1-202ENST00000502453 HSCBQ8IWL3 235 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 TNS4Q8IZW8 715 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 PARD3BQ8TEW8 1205 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 ZNF180Q9UJW8 692 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 MAGEB6P1A0A0J9YX57 407 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 GOLIM4O00461 696 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 FIBPO43427 364 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 DIAPH1O60610 1272 aaKnown RBP4.58□□□□□ -1.68
SUB1-202ENST00000502453 GBP2P32456 591 aaPredicted RBP4.58□□□□□ -1.68
SUB1-202ENST00000502453 MORC1Q86VD1 984 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 HOOK2Q96ED9 719 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 SELENOOQ9BVL4 669 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 PPT2Q9UMR5 302 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 RGS20O76081 388 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 STAT3P40763 770 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 MAP3K11Q16584 847 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 LYPD8Q6UX82 237 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 SPATC1Q76KD6 591 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 ZBTB33Q86T24 672 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 NIM1KQ8IY84 436 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 YIPF4Q9BSR8 244 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 DNAJC25Q9H1X3 360 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 CNNM2Q9H8M5 875 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 C9orf78Q9NZ63 289 aaPredicted RBP4.58□□□□□ -1.68
SUB1-202ENST00000502453 USP25Q9UHP3 1055 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 GTF2A1LQ9UNN4 478 aa4.58□□□□□ -1.68
SUB1-202ENST00000502453 USP31Q70CQ4 1352 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 ERCC6L2Q5T890 1561 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 STAU1O95793 577 aaKnown RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 F2P00734 622 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 HALP42357 657 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 ALDH1L2Q3SY69 923 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 C1QTNF12Q5T7M4 302 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 EDEM1Q92611 657 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 ERP27Q96DN0 273 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 EIF2AK1Q9BQI3 630 aaKnown RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 ASPSCR1Q9BZE9 553 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 SEPT9Q9UHD8 586 aaPredicted RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 hCG_1984214I3L0E3 225 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 MTA1Q13330 715 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 C1orf228Q6PIY5 440 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 ANKRD13DQ6ZTN6 518 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 THNSL2Q86YJ6 484 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 ENAHQ8N8S7 591 aaPredicted RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 EPS8L3Q8TE67 593 aaKnown RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 CAAP1Q9H8G2 361 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 UBP1Q9NZI7 540 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 POLG2Q9UHN1 485 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 FBXO2Q9UK22 296 aaPredicted RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 ASAP1Q9ULH1 1129 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 SRGNP10124 158 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 COL6A1P12109 1028 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 COX20Q5RI15 118 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 FAM169BQ8N8A8 192 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 JPH3Q8WXH2 748 aaPredicted RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 IFT122Q9HBG6 1241 aa4.57□□□□□ -1.68
SUB1-202ENST00000502453 FEZ2Q9UHY8 353 aaPredicted RBP4.57□□□□□ -1.68
SUB1-202ENST00000502453 AGR2O95994 175 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 SOX5P35711 763 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 STRN3Q13033 797 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 PIN1Q13526 163 aaPredicted RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 PPP2R5EQ16537 467 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 DDR2Q16832 855 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 C2orf27AQ580R0 203 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 ZBTB46Q86UZ6 589 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 TTC16Q8NEE8 873 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 PPHLN1Q8NEY8 458 aaKnown RBP4.56□□□□□ -1.68
SUB1-202ENST00000502453 SKA1Q96BD8 255 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 MFSD3Q96ES6 412 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 OCSTAMPQ9BR26 566 aa4.56□□□□□ -1.68
SUB1-202ENST00000502453 TSPAN10Q9H1Z9 355 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms