RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 DDX58O95786 925 aaKnown RBP18.96■□□□□ 0.63
TRAF4-212ENST00000498540 IGKV5-2P06315 115 aa18.96■□□□□ 0.63
TRAF4-212ENST00000498540 DACT2Q5SW24 774 aa18.96■□□□□ 0.63
TRAF4-212ENST00000498540 TTLL11Q8NHH1 800 aa18.96■□□□□ 0.63
TRAF4-212ENST00000498540 GREM2Q9H772 168 aa18.96■□□□□ 0.63
TRAF4-212ENST00000498540 MINPP1Q9UNW1 487 aa18.96■□□□□ 0.63
TRAF4-212ENST00000498540 HPS5Q9UPZ3 1129 aa18.96■□□□□ 0.63
TRAF4-212ENST00000498540 CCDC30Q5VVM6 783 aa18.95■□□□□ 0.62
TRAF4-212ENST00000498540 TSPYL6Q8N831 410 aa18.95■□□□□ 0.62
TRAF4-212ENST00000498540 ZNF296Q8WUU4 475 aaPredicted RBP18.95■□□□□ 0.62
TRAF4-212ENST00000498540 FBXW7Q969H0 707 aa18.95■□□□□ 0.62
TRAF4-212ENST00000498540 BSDC1Q9NW68 430 aaPredicted RBP18.95■□□□□ 0.62
TRAF4-212ENST00000498540 WNT10BO00744 389 aa18.94■□□□□ 0.62
TRAF4-212ENST00000498540 CCT4P50991 539 aaKnown RBP18.94■□□□□ 0.62
TRAF4-212ENST00000498540 CALD1Q05682 793 aaKnown RBP18.94■□□□□ 0.62
TRAF4-212ENST00000498540 TTLL12Q14166 644 aaPredicted RBP18.94■□□□□ 0.62
TRAF4-212ENST00000498540 TXNRD3Q86VQ6 643 aa18.94■□□□□ 0.62
TRAF4-212ENST00000498540 PI4KAP2A4QPH2 592 aa18.93■□□□□ 0.62
TRAF4-212ENST00000498540 SASH1O94885 1247 aa18.93■□□□□ 0.62
TRAF4-212ENST00000498540 MKRN3Q13064 507 aaKnown RBP18.93■□□□□ 0.62
TRAF4-212ENST00000498540 CWF19L2Q2TBE0 894 aaKnown RBP18.93■□□□□ 0.62
TRAF4-212ENST00000498540 KSR2Q6VAB6 950 aa18.93■□□□□ 0.62
TRAF4-212ENST00000498540 PI4KAP1Q8N8J0 262 aa18.93■□□□□ 0.62
TRAF4-212ENST00000498540 HDAC9Q9UKV0 1011 aa18.93■□□□□ 0.62
TRAF4-212ENST00000498540 STRIP1Q5VSL9 837 aa18.92■□□□□ 0.62
TRAF4-212ENST00000498540 OGFOD1Q8N543 542 aa18.92■□□□□ 0.62
TRAF4-212ENST00000498540 COA1Q9GZY4 146 aa18.92■□□□□ 0.62
TRAF4-212ENST00000498540 MYO3BQ8WXR4 1341 aa18.92■□□□□ 0.62
TRAF4-212ENST00000498540 KLRK1P26718 216 aa18.91■□□□□ 0.62
TRAF4-212ENST00000498540 TM4SF4P48230 202 aa18.91■□□□□ 0.62
TRAF4-212ENST00000498540 PKN2Q16513 984 aaKnown RBP18.91■□□□□ 0.62
TRAF4-212ENST00000498540 PRKRIP1Q9H875 184 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-212ENST00000498540 PCDH10Q9P2E7 1040 aa18.91■□□□□ 0.62
TRAF4-212ENST00000498540 NEURL1BA8MQ27 555 aa18.9■□□□□ 0.62
TRAF4-212ENST00000498540 GPR25O00155 361 aa18.9■□□□□ 0.62
TRAF4-212ENST00000498540 NF2P35240 595 aa18.9■□□□□ 0.62
TRAF4-212ENST00000498540 UBE3BQ7Z3V4 1068 aa18.9■□□□□ 0.62
TRAF4-212ENST00000498540 PTPN12Q05209 780 aaKnown RBP18.89■□□□□ 0.61
TRAF4-212ENST00000498540 NEXNQ0ZGT2 675 aa18.89■□□□□ 0.61
TRAF4-212ENST00000498540 PRKG1Q13976 671 aa18.89■□□□□ 0.61
TRAF4-212ENST00000498540 PRPF38BQ5VTL8 546 aaKnown RBP18.89■□□□□ 0.61
TRAF4-212ENST00000498540 KIAA0825Q8IV33 1275 aa18.89■□□□□ 0.61
TRAF4-212ENST00000498540 TSR2Q969E8 191 aaKnown RBP18.89■□□□□ 0.61
TRAF4-212ENST00000498540 LEMD3Q9Y2U8 911 aa18.89■□□□□ 0.61
TRAF4-212ENST00000498540 A0A1B0GUL6 1792 aa18.88■□□□□ 0.61
TRAF4-212ENST00000498540 H7C1W4 665 aa18.88■□□□□ 0.61
TRAF4-212ENST00000498540 IGHMBP2P38935 993 aaKnown RBP18.88■□□□□ 0.61
TRAF4-212ENST00000498540 NOM1Q5C9Z4 860 aaKnown RBP18.88■□□□□ 0.61
TRAF4-212ENST00000498540 TTLL5Q6EMB2 1281 aa18.88■□□□□ 0.61
TRAF4-212ENST00000498540 G2E3Q7L622 706 aa18.88■□□□□ 0.61
TRAF4-212ENST00000498540 CHMP4AQ9BY43 222 aa18.88■□□□□ 0.61
TRAF4-212ENST00000498540 R3HDMLQ9H3Y0 253 aa18.88■□□□□ 0.61
TRAF4-212ENST00000498540 ZNF804BA4D1E1 1349 aa18.88■□□□□ 0.61
TRAF4-212ENST00000498540 SREBF2Q12772 1141 aa18.87■□□□□ 0.61
TRAF4-212ENST00000498540 ECM29Q5VYK3 1845 aa18.87■□□□□ 0.61
TRAF4-212ENST00000498540 APOBEC3FQ8IUX4 373 aaKnown RBP18.87■□□□□ 0.61
TRAF4-212ENST00000498540 ZBED3Q96IU2 234 aaPredicted RBP18.87■□□□□ 0.61
TRAF4-212ENST00000498540 STK31Q9BXU1 1019 aa18.87■□□□□ 0.61
TRAF4-212ENST00000498540 FZD1Q9UP38 647 aa18.87■□□□□ 0.61
TRAF4-212ENST00000498540 LAMB1P07942 1786 aa18.86■□□□□ 0.61
TRAF4-212ENST00000498540 ITGA6P23229 1130 aa18.86■□□□□ 0.61
TRAF4-212ENST00000498540 GTF2IP78347 998 aa18.86■□□□□ 0.61
TRAF4-212ENST00000498540 FBXO46Q6PJ61 603 aaPredicted RBP18.86■□□□□ 0.61
TRAF4-212ENST00000498540 ARMC9Q7Z3E5 817 aa18.86■□□□□ 0.61
TRAF4-212ENST00000498540 MMP14P50281 582 aa18.85■□□□□ 0.61
TRAF4-212ENST00000498540 LDLRAD1Q5T700 205 aa18.85■□□□□ 0.61
TRAF4-212ENST00000498540 SPRYD7Q5W111 196 aa18.85■□□□□ 0.61
TRAF4-212ENST00000498540 PLA2G12BQ9BX93 195 aa18.85■□□□□ 0.61
TRAF4-212ENST00000498540 CFHR5Q9BXR6 569 aa18.85■□□□□ 0.61
TRAF4-212ENST00000498540 ANKRD2Q9GZV1 360 aa18.85■□□□□ 0.61
TRAF4-212ENST00000498540 ANGEL1Q9UNK9 670 aaKnown RBP18.85■□□□□ 0.61
TRAF4-212ENST00000498540 SSC5DA1L4H1 1573 aa18.85■□□□□ 0.61
TRAF4-212ENST00000498540 COL1A1P02452 1464 aaPredicted RBP18.84■□□□□ 0.61
TRAF4-212ENST00000498540 FKTNO75072 461 aa18.84■□□□□ 0.61
TRAF4-212ENST00000498540 CASP7P55210 303 aa18.84■□□□□ 0.61
TRAF4-212ENST00000498540 GCKRQ14397 625 aa18.84■□□□□ 0.61
TRAF4-212ENST00000498540 MPHOSPH8Q99549 860 aa18.84■□□□□ 0.61
TRAF4-212ENST00000498540 SNAP23O00161 211 aa18.83■□□□□ 0.6
TRAF4-212ENST00000498540 CHRNDQ07001 517 aa18.83■□□□□ 0.6
TRAF4-212ENST00000498540 TWISTNBQ3B726 338 aaPredicted RBP18.83■□□□□ 0.6
TRAF4-212ENST00000498540 CERS5Q8N5B7 392 aa18.83■□□□□ 0.6
TRAF4-212ENST00000498540 PCDHAC2Q9Y5I4 1007 aa18.83■□□□□ 0.6
TRAF4-212ENST00000498540 IRS2Q9Y4H2 1338 aa18.82■□□□□ 0.6
TRAF4-212ENST00000498540 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
TRAF4-212ENST00000498540 CSF1RP07333 972 aa18.82■□□□□ 0.6
TRAF4-212ENST00000498540 KCNJ4P48050 445 aa18.82■□□□□ 0.6
TRAF4-212ENST00000498540 DEFB129Q9H1M3 183 aa18.82■□□□□ 0.6
TRAF4-212ENST00000498540 CD209Q9NNX6 404 aa18.82■□□□□ 0.6
TRAF4-212ENST00000498540 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.82■□□□□ 0.6
TRAF4-212ENST00000498540 HTTP42858 3142 aa18.82■□□□□ 0.6
TRAF4-212ENST00000498540 DLGAP5Q15398 846 aa18.81■□□□□ 0.6
TRAF4-212ENST00000498540 CLMNQ96JQ2 1002 aa18.81■□□□□ 0.6
TRAF4-212ENST00000498540 TAF5LO75529 589 aa18.8■□□□□ 0.6
TRAF4-212ENST00000498540 FLIIQ13045 1269 aa18.8■□□□□ 0.6
TRAF4-212ENST00000498540 AOX1Q06278 1338 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 MANSC4A6NHS7 340 aaPredicted RBP18.79■□□□□ 0.6
TRAF4-212ENST00000498540 ALDH1A1P00352 501 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 MAP3K11Q16584 847 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 IFNL1Q8IU54 200 aa18.79■□□□□ 0.6
TRAF4-212ENST00000498540 MTMR14Q8NCE2 650 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 89.6 ms