RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 SALL4Q9UJQ4 1053 aa6.4□□□□□ -1.38
PSPC1-205ENST00000497722 NFKBIEO00221 500 aa6.39□□□□□ -1.39
PSPC1-205ENST00000497722 RPLP1P05386 114 aaKnown RBP6.39□□□□□ -1.39
PSPC1-205ENST00000497722 TAL1P17542 331 aaPredicted RBP6.39□□□□□ -1.39
PSPC1-205ENST00000497722 MZF1P28698 734 aaPredicted RBP6.39□□□□□ -1.39
PSPC1-205ENST00000497722 MTMR3Q13615 1198 aa6.39□□□□□ -1.39
PSPC1-205ENST00000497722 Q6ZS46 218 aa6.39□□□□□ -1.39
PSPC1-205ENST00000497722 SLC51AQ86UW1 340 aa6.39□□□□□ -1.39
PSPC1-205ENST00000497722 MAP4K3Q8IVH8 894 aa6.39□□□□□ -1.39
PSPC1-205ENST00000497722 RASSF4Q9H2L5 321 aa6.39□□□□□ -1.39
PSPC1-205ENST00000497722 CHRDQ9H2X0 955 aa6.39□□□□□ -1.39
PSPC1-205ENST00000497722 IREB2P48200 963 aaKnown RBP6.38□□□□□ -1.39
PSPC1-205ENST00000497722 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
PSPC1-205ENST00000497722 DZIP1LQ8IYY4 767 aaKnown RBP6.38□□□□□ -1.39
PSPC1-205ENST00000497722 C1orf127Q8N9H9 656 aa6.38□□□□□ -1.39
PSPC1-205ENST00000497722 GALNT11Q8NCW6 608 aa6.38□□□□□ -1.39
PSPC1-205ENST00000497722 MEGF10Q96KG7 1140 aa6.38□□□□□ -1.39
PSPC1-205ENST00000497722 PBX4Q9BYU1 374 aa6.38□□□□□ -1.39
PSPC1-205ENST00000497722 ADAM19Q9H013 955 aa6.38□□□□□ -1.39
PSPC1-205ENST00000497722 MUC3BQ9H195 1237 aa6.38□□□□□ -1.39
PSPC1-205ENST00000497722 A6NHS1 94 aa6.37□□□□□ -1.39
PSPC1-205ENST00000497722 F8W735 103 aaPredicted RBP6.37□□□□□ -1.39
PSPC1-205ENST00000497722 SUPT5HO00267 1087 aaKnown RBP6.37□□□□□ -1.39
PSPC1-205ENST00000497722 FZD6O60353 706 aa6.37□□□□□ -1.39
PSPC1-205ENST00000497722 DNM1Q05193 864 aaKnown RBP6.37□□□□□ -1.39
PSPC1-205ENST00000497722 ECM1Q16610 540 aa6.37□□□□□ -1.39
PSPC1-205ENST00000497722 CEP135Q66GS9 1140 aa6.37□□□□□ -1.39
PSPC1-205ENST00000497722 POP1Q99575 1024 aaKnown RBP6.37□□□□□ -1.39
PSPC1-205ENST00000497722 PPME1Q9Y570 386 aa6.37□□□□□ -1.39
PSPC1-205ENST00000497722 SMNDC1O75940 238 aaKnown RBP eCLIP6.36□□□□□ -1.39
PSPC1-205ENST00000497722 SSTR4P31391 388 aa6.36□□□□□ -1.39
PSPC1-205ENST00000497722 CD97P48960 835 aa6.36□□□□□ -1.39
PSPC1-205ENST00000497722 ALKBH2Q6NS38 261 aa6.36□□□□□ -1.39
PSPC1-205ENST00000497722 SPACA7Q96KW9 195 aa6.36□□□□□ -1.39
PSPC1-205ENST00000497722 MRPL18Q9H0U6 180 aaKnown RBP6.36□□□□□ -1.39
PSPC1-205ENST00000497722 KANSL3Q9P2N6 904 aa6.36□□□□□ -1.39
PSPC1-205ENST00000497722 POLIQ9UNA4 740 aa6.36□□□□□ -1.39
PSPC1-205ENST00000497722 USTQ9Y2C2 406 aa6.36□□□□□ -1.39
PSPC1-205ENST00000497722 LINC01387J3KSC0 135 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 ALX3O95076 343 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 ACPPP15309 386 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 EPHA1P21709 976 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 CDC27P30260 824 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 FKBP4Q02790 459 aaKnown RBP eCLIP6.35□□□□□ -1.39
PSPC1-205ENST00000497722 SF3B2Q13435 895 aaKnown RBP6.35□□□□□ -1.39
PSPC1-205ENST00000497722 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.35□□□□□ -1.39
PSPC1-205ENST00000497722 LACRTQ9GZZ8 138 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 AKTIPQ9H8T0 292 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 DZANK1Q9NVP4 752 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 KCNK4Q9NYG8 393 aa6.35□□□□□ -1.39
PSPC1-205ENST00000497722 FAM13AO94988 1023 aa6.34□□□□□ -1.39
PSPC1-205ENST00000497722 PRR23CQ6ZRP0 262 aa6.34□□□□□ -1.39
PSPC1-205ENST00000497722 NCAPG2Q86XI2 1143 aa6.34□□□□□ -1.39
PSPC1-205ENST00000497722 GJD3Q8N144 294 aa6.34□□□□□ -1.39
PSPC1-205ENST00000497722 SH2B1Q9NRF2 756 aaPredicted RBP6.34□□□□□ -1.39
PSPC1-205ENST00000497722 TNFRSF21O75509 655 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 WISP1O95388 367 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 PCSK2P16519 638 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 CES1P23141 567 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 GP2P55259 537 aaKnown RBP6.33□□□□□ -1.4
PSPC1-205ENST00000497722 C8orf34Q49A92 452 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 TXNDC11Q6PKC3 985 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 DCAF11Q8TEB1 546 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 HHIPQ96QV1 700 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 CCDC87Q9NVE4 849 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 EGFL7Q9UHF1 273 aa6.33□□□□□ -1.4
PSPC1-205ENST00000497722 OAS3Q9Y6K5 1087 aaKnown RBP6.33□□□□□ -1.4
PSPC1-205ENST00000497722 FSCN2O14926 492 aa6.32□□□□□ -1.4
PSPC1-205ENST00000497722 EREGO14944 169 aa6.32□□□□□ -1.4
PSPC1-205ENST00000497722 ADAM11O75078 769 aa6.32□□□□□ -1.4
PSPC1-205ENST00000497722 PTPRAP18433 802 aa6.32□□□□□ -1.4
PSPC1-205ENST00000497722 FSTP19883 344 aa6.32□□□□□ -1.4
PSPC1-205ENST00000497722 CD68P34810 354 aaPredicted RBP6.32□□□□□ -1.4
PSPC1-205ENST00000497722 TMEM102Q8N9M5 508 aaPredicted RBP6.32□□□□□ -1.4
PSPC1-205ENST00000497722 PMEPA1Q969W9 287 aa6.32□□□□□ -1.4
PSPC1-205ENST00000497722 SOX13Q9UN79 622 aa6.32□□□□□ -1.4
PSPC1-205ENST00000497722 ICMTO60725 284 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 TRPA1O75762 1119 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 USP5P45974 858 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 JAG1P78504 1218 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 ZNF211Q13398 564 aaPredicted RBP6.31□□□□□ -1.4
PSPC1-205ENST00000497722 KIAA1211Q6ZU35 1233 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 AGGF1Q8N302 714 aaeCLIP6.31□□□□□ -1.4
PSPC1-205ENST00000497722 KLHL23Q8NBE8 558 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 FOXD4L4Q8WXT5 416 aaPredicted RBP6.31□□□□□ -1.4
PSPC1-205ENST00000497722 NXPE3Q969Y0 559 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 UBL7Q96S82 380 aaPredicted RBP6.31□□□□□ -1.4
PSPC1-205ENST00000497722 ARID3AQ99856 593 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 ANO2Q9NQ90 1003 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 FOXD3Q9UJU5 478 aaPredicted RBP6.31□□□□□ -1.4
PSPC1-205ENST00000497722 MTMR7Q9Y216 660 aa6.31□□□□□ -1.4
PSPC1-205ENST00000497722 KIAA1324LA8MWY0 1029 aaPredicted RBP6.3□□□□□ -1.4
PSPC1-205ENST00000497722 H3BRJ5 948 aa6.3□□□□□ -1.4
PSPC1-205ENST00000497722 PDE2AO00408 941 aaPredicted RBP6.3□□□□□ -1.4
PSPC1-205ENST00000497722 EHHADHQ08426 723 aa6.3□□□□□ -1.4
PSPC1-205ENST00000497722 PEAR1Q5VY43 1037 aaPredicted RBP6.3□□□□□ -1.4
PSPC1-205ENST00000497722 SNX29Q8TEQ0 813 aa6.3□□□□□ -1.4
PSPC1-205ENST00000497722 WNT8BQ93098 351 aa6.3□□□□□ -1.4
PSPC1-205ENST00000497722 KLHDC7BQ96G42 594 aa6.3□□□□□ -1.4
PSPC1-205ENST00000497722 ZKSCAN3Q9BRR0 538 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms