RNA–Protein interactions for RNA: ENST00000497147.1

SCNM1-206, Transcript of sodium channel modifier 1, humanhuman

TSL 2

Gene SCNM1, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNM1-206ENST00000497147 SREBF2Q12772 1141 aa12.52□□□□□ -0.41
SCNM1-206ENST00000497147 RSBN1LQ6PCB5 846 aaPredicted RBP12.52□□□□□ -0.41
SCNM1-206ENST00000497147 TSPYL6Q8N831 410 aa12.52□□□□□ -0.41
SCNM1-206ENST00000497147 AGBL3Q8NEM8 1001 aa12.52□□□□□ -0.41
SCNM1-206ENST00000497147 EYA3Q99504 573 aa12.52□□□□□ -0.41
SCNM1-206ENST00000497147 MYOZ2Q9NPC6 264 aa12.52□□□□□ -0.41
SCNM1-206ENST00000497147 ZNF609O15014 1411 aa12.52□□□□□ -0.41
SCNM1-206ENST00000497147 TRIOBPQ9H2D6 2365 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 TCIRG1Q13488 830 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 TTLL12Q14166 644 aaPredicted RBP12.51□□□□□ -0.41
SCNM1-206ENST00000497147 NBPF9Q3BBW0 867 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 CCDC30Q5VVM6 783 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 TRMT2AQ8IZ69 625 aaKnown RBP12.51□□□□□ -0.41
SCNM1-206ENST00000497147 ARMC5Q96C12 935 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 OTUD5Q96G74 571 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 STK31Q9BXU1 1019 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 PTPN22Q9Y2R2 807 aa12.51□□□□□ -0.41
SCNM1-206ENST00000497147 H0YGN5 161 aa12.5□□□□□ -0.41
SCNM1-206ENST00000497147 USP17L8P0C7I0 530 aa12.5□□□□□ -0.41
SCNM1-206ENST00000497147 CAP1Q01518 475 aa12.5□□□□□ -0.41
SCNM1-206ENST00000497147 SF3B3Q15393 1217 aaKnown RBP12.5□□□□□ -0.41
SCNM1-206ENST00000497147 SPRYD7Q5W111 196 aa12.5□□□□□ -0.41
SCNM1-206ENST00000497147 COPS6Q7L5N1 327 aa12.5□□□□□ -0.41
SCNM1-206ENST00000497147 XAGE3Q8WTP9 111 aa12.5□□□□□ -0.41
SCNM1-206ENST00000497147 ZC3H12CQ9C0D7 883 aaKnown RBP12.5□□□□□ -0.41
SCNM1-206ENST00000497147 CHPF2Q9P2E5 772 aa12.5□□□□□ -0.41
SCNM1-206ENST00000497147 DBF4Q9UBU7 674 aaPredicted RBP12.5□□□□□ -0.41
SCNM1-206ENST00000497147 DDX60Q8IY21 1712 aaKnown RBP12.5□□□□□ -0.41
SCNM1-206ENST00000497147 RBBP6Q7Z6E9 1792 aaKnown RBP12.5□□□□□ -0.41
SCNM1-206ENST00000497147 CEP290O15078 2479 aa12.49□□□□□ -0.41
SCNM1-206ENST00000497147 KIAA0100Q14667 2235 aaKnown RBP12.49□□□□□ -0.41
SCNM1-206ENST00000497147 AIMP1Q12904 312 aaKnown RBP12.49□□□□□ -0.41
SCNM1-206ENST00000497147 HSP90AB3PQ58FF7 597 aa12.49□□□□□ -0.41
SCNM1-206ENST00000497147 FAM89AQ96GI7 184 aa12.49□□□□□ -0.41
SCNM1-206ENST00000497147 PODXL2Q9NZ53 605 aa12.49□□□□□ -0.41
SCNM1-206ENST00000497147 VAMP4O75379 141 aa12.48□□□□□ -0.41
SCNM1-206ENST00000497147 CT47B1P0C2W7 299 aaPredicted RBP12.48□□□□□ -0.41
SCNM1-206ENST00000497147 RPS8P62241 208 aaKnown RBP12.48□□□□□ -0.41
SCNM1-206ENST00000497147 PRKG1Q13976 671 aa12.48□□□□□ -0.41
SCNM1-206ENST00000497147 LDLRAD1Q5T700 205 aa12.48□□□□□ -0.41
SCNM1-206ENST00000497147 IFNL1Q8IU54 200 aa12.48□□□□□ -0.41
SCNM1-206ENST00000497147 CD99L2Q8TCZ2 262 aa12.48□□□□□ -0.41
SCNM1-206ENST00000497147 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
SCNM1-206ENST00000497147 IGF2BP3O00425 579 aaKnown RBP eCLIP12.47□□□□□ -0.41
SCNM1-206ENST00000497147 UFL1O94874 794 aa12.47□□□□□ -0.41
SCNM1-206ENST00000497147 ALDH1A1P00352 501 aa12.47□□□□□ -0.41
SCNM1-206ENST00000497147 SLC17A8Q8NDX2 589 aa12.47□□□□□ -0.41
SCNM1-206ENST00000497147 HYPKQ9NX55 129 aa12.47□□□□□ -0.41
SCNM1-206ENST00000497147 LAMA3Q16787 3333 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 CUL9Q8IWT3 2517 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 WTIPA6NIX2 430 aaPredicted RBP12.46□□□□□ -0.41
SCNM1-206ENST00000497147 G3V3G9 751 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 WNT10BO00744 389 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 RTL5Q5HYW3 569 aaPredicted RBP12.46□□□□□ -0.41
SCNM1-206ENST00000497147 DCAF8Q5TAQ9 597 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 ZNF333Q96JL9 665 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 MXD3Q9BW11 206 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 SEC31BQ9NQW1 1179 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 ANKIB1Q9P2G1 1089 aa12.46□□□□□ -0.41
SCNM1-206ENST00000497147 USP17L3A6NCW0 530 aa12.45□□□□□ -0.42
SCNM1-206ENST00000497147 USP17L4A6NCW7 530 aa12.45□□□□□ -0.42
SCNM1-206ENST00000497147 CHRDL2Q6WN34 429 aa12.45□□□□□ -0.42
SCNM1-206ENST00000497147 USP17L1Q7RTZ2 530 aa12.45□□□□□ -0.42
SCNM1-206ENST00000497147 RBM27Q9P2N5 1060 aaKnown RBP12.45□□□□□ -0.42
SCNM1-206ENST00000497147 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
SCNM1-206ENST00000497147 CACNA1FO60840 1977 aa12.45□□□□□ -0.42
SCNM1-206ENST00000497147 MANSC4A6NHS7 340 aaPredicted RBP12.44□□□□□ -0.42
SCNM1-206ENST00000497147 ATP5J2-PTCD1G3V325 749 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 DDX58O95786 925 aaKnown RBP12.44□□□□□ -0.42
SCNM1-206ENST00000497147 NF2P35240 595 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 INHBEP58166 350 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 CRHR2Q13324 411 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 ARMC9Q7Z3E5 817 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 ERO1AQ96HE7 468 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 CLMNQ96JQ2 1002 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 ISCA1Q9BUE6 129 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 TMEM106CQ9BVX2 250 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 EFCC1Q9HA90 598 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 SMC4Q9NTJ3 1288 aa12.44□□□□□ -0.42
SCNM1-206ENST00000497147 ANGEL1Q9UNK9 670 aaKnown RBP12.44□□□□□ -0.42
SCNM1-206ENST00000497147 SASH1O94885 1247 aa12.43□□□□□ -0.42
SCNM1-206ENST00000497147 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
SCNM1-206ENST00000497147 DACT2Q5SW24 774 aa12.43□□□□□ -0.42
SCNM1-206ENST00000497147 SLC10A4Q96EP9 437 aa12.43□□□□□ -0.42
SCNM1-206ENST00000497147 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.43□□□□□ -0.42
SCNM1-206ENST00000497147 PSME4Q14997 1843 aa12.43□□□□□ -0.42
SCNM1-206ENST00000497147 IRS4O14654 1257 aaPredicted RBP12.42□□□□□ -0.42
SCNM1-206ENST00000497147 PODNQ7Z5L7 613 aa12.42□□□□□ -0.42
SCNM1-206ENST00000497147 SSH1Q8WYL5 1049 aa12.42□□□□□ -0.42
SCNM1-206ENST00000497147 WNK4Q96J92 1243 aa12.42□□□□□ -0.42
SCNM1-206ENST00000497147 PTPN18Q99952 460 aa12.42□□□□□ -0.42
SCNM1-206ENST00000497147 PHAXQ9H814 394 aaKnown RBP12.42□□□□□ -0.42
SCNM1-206ENST00000497147 ZBTB48P10074 688 aaPredicted RBP12.41□□□□□ -0.42
SCNM1-206ENST00000497147 GJA5P36382 358 aa12.41□□□□□ -0.42
SCNM1-206ENST00000497147 SP3Q02447 781 aa12.41□□□□□ -0.42
SCNM1-206ENST00000497147 FLIIQ13045 1269 aa12.41□□□□□ -0.42
SCNM1-206ENST00000497147 FKBP5Q13451 457 aaPredicted RBP12.41□□□□□ -0.42
SCNM1-206ENST00000497147 ANKRD13DQ6ZTN6 518 aa12.41□□□□□ -0.42
SCNM1-206ENST00000497147 RIC3Q7Z5B4 369 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms