RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 SH2B1Q9NRF2 756 aaPredicted RBP8.67□□□□□ -1.02
RAB3GAP1-206ENST00000497080 TNFRSF21O75509 655 aa8.66□□□□□ -1.02
RAB3GAP1-206ENST00000497080 ALX3O95076 343 aa8.66□□□□□ -1.02
RAB3GAP1-206ENST00000497080 USP5P45974 858 aa8.66□□□□□ -1.02
RAB3GAP1-206ENST00000497080 TP53INP1Q96A56 240 aa8.66□□□□□ -1.02
RAB3GAP1-206ENST00000497080 EREGO14944 169 aa8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 PHACTR2O75167 634 aa8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 MAP4K3Q8IVH8 894 aa8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 GALNT11Q8NCW6 608 aa8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 SRA1Q9HD15 236 aaKnown RBP8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 DZANK1Q9NVP4 752 aa8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 EGFL7Q9UHF1 273 aa8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 FOXD3Q9UJU5 478 aaPredicted RBP8.65□□□□□ -1.02
RAB3GAP1-206ENST00000497080 NFKBIEO00221 500 aa8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 DYRK3O43781 588 aa8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 PTPRAP18433 802 aa8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 EHHADHQ08426 723 aa8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 ECM1Q16610 540 aa8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 HHIPQ96QV1 700 aa8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 SSBP4Q9BWG4 385 aaPredicted RBP8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 CARD10Q9BWT7 1032 aa8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 MRPL18Q9H0U6 180 aaKnown RBP8.64□□□□□ -1.03
RAB3GAP1-206ENST00000497080 H3BRB1 525 aa8.63□□□□□ -1.03
RAB3GAP1-206ENST00000497080 EPHA1P21709 976 aa8.63□□□□□ -1.03
RAB3GAP1-206ENST00000497080 TMEM130Q8N3G9 435 aa8.63□□□□□ -1.03
RAB3GAP1-206ENST00000497080 ADAM19Q9H013 955 aa8.63□□□□□ -1.03
RAB3GAP1-206ENST00000497080 TUT1Q9H6E5 874 aaKnown RBP8.63□□□□□ -1.03
RAB3GAP1-206ENST00000497080 AKTIPQ9H8T0 292 aa8.63□□□□□ -1.03
RAB3GAP1-206ENST00000497080 FAM177BA6PVY3 158 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 PDE2AO00408 941 aaPredicted RBP8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 FSCN2O14926 492 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 GLYCTKQ8IVS8 523 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 GJD3Q8N144 294 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 SNX29Q8TEQ0 813 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 MEGF10Q96KG7 1140 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 OSMRQ99650 979 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 KCNK4Q9NYG8 393 aa8.62□□□□□ -1.03
RAB3GAP1-206ENST00000497080 F8W735 103 aaPredicted RBP8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 H2AFB1P0C5Y9 115 aa8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 H2AFB2P0C5Z0 115 aa8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 CD68P34810 354 aaPredicted RBP8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 FAM117BQ6P1L5 589 aa8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 TXNDC2Q86VQ3 553 aa8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 DCAF11Q8TEB1 546 aa8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 BRPF3Q9ULD4 1205 aa8.61□□□□□ -1.03
RAB3GAP1-206ENST00000497080 DDX3YO15523 660 aaKnown RBP8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 EDN3P14138 238 aa8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 PDE4CQ08493 712 aa8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 PRSS36Q5K4E3 855 aa8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 AGGF1Q8N302 714 aaeCLIP8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 KLHDC7BQ96G42 594 aa8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 ZKSCAN3Q9BRR0 538 aa8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 ZFYVE28Q9HCC9 887 aa8.6□□□□□ -1.03
RAB3GAP1-206ENST00000497080 TM4SF5O14894 197 aa8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 POLR3DP05423 398 aaPredicted RBP8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 ARHGAP4P98171 946 aa8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 FOXD4L6Q3SYB3 417 aaPredicted RBP8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 FOXD4L3Q6VB84 417 aaPredicted RBP8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 TMEM102Q8N9M5 508 aaPredicted RBP8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 NXPE3Q969Y0 559 aa8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 SEC31BQ9NQW1 1179 aa8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 LATS2Q9NRM7 1088 aa8.59□□□□□ -1.03
RAB3GAP1-206ENST00000497080 WISP1O95388 367 aa8.58□□□□□ -1.04
RAB3GAP1-206ENST00000497080 CABP4P57796 275 aa8.58□□□□□ -1.04
RAB3GAP1-206ENST00000497080 DZIP1LQ8IYY4 767 aaKnown RBP8.58□□□□□ -1.04
RAB3GAP1-206ENST00000497080 KLHL23Q8NBE8 558 aa8.58□□□□□ -1.04
RAB3GAP1-206ENST00000497080 AMOTL2Q9Y2J4 779 aa8.58□□□□□ -1.04
RAB3GAP1-206ENST00000497080 H3BRJ5 948 aa8.57□□□□□ -1.04
RAB3GAP1-206ENST00000497080 PEAR1Q5VY43 1037 aaPredicted RBP8.57□□□□□ -1.04
RAB3GAP1-206ENST00000497080 SLC7A3Q8WY07 619 aa8.57□□□□□ -1.04
RAB3GAP1-206ENST00000497080 GLB1P16278 677 aa8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 PIP4K2BP78356 416 aa8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 DUOXA2Q1HG44 320 aa8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 ZMYM1Q5SVZ6 1142 aa8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 ACAD11Q709F0 780 aa8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 CCER1Q8TC90 406 aaPredicted RBP8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 SOX13Q9UN79 622 aa8.56□□□□□ -1.04
RAB3GAP1-206ENST00000497080 NDUFB5O43674 189 aa8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 ADAM11O75078 769 aa8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 HGSNATQ68CP4 663 aa8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 KIAA1211Q6ZU35 1233 aa8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 ASAP3Q8TDY4 903 aa8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 FOXD4L4Q8WXT5 416 aaPredicted RBP8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 BSNDQ8WZ55 320 aa8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 UBL7Q96S82 380 aaPredicted RBP8.55□□□□□ -1.04
RAB3GAP1-206ENST00000497080 SOX1O00570 391 aaPredicted RBP8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 USPL1Q5W0Q7 1092 aa8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 Q6ZS46 218 aa8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 VN1R5Q7Z5H4 357 aa8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 Q8N3U1 123 aa8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 UBASH3BQ8TF42 649 aa8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 WNT8BQ93098 351 aa8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 OSGEPQ9NPF4 335 aa8.54□□□□□ -1.04
RAB3GAP1-206ENST00000497080 NLRP12P59046 1061 aa8.53□□□□□ -1.04
RAB3GAP1-206ENST00000497080 PRR23CQ6ZRP0 262 aa8.53□□□□□ -1.04
RAB3GAP1-206ENST00000497080 TMC1Q8TDI8 760 aa8.53□□□□□ -1.04
RAB3GAP1-206ENST00000497080 METTL12A8MUP2 240 aa8.52□□□□□ -1.05
RAB3GAP1-206ENST00000497080 ARL4DP49703 201 aa8.52□□□□□ -1.05
RAB3GAP1-206ENST00000497080 C19orf57Q0VDD7 668 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms