RNA–Protein interactions for RNA: ENST00000497055.1

SGIP1-214, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

TSL 2

Gene SGIP1, Length 402 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-214ENST00000497055 SBF1O95248 1867 aa6.73□□□□□ -1.33
SGIP1-214ENST00000497055 EIF3AQ14152 1382 aaKnown RBP6.72□□□□□ -1.33
SGIP1-214ENST00000497055 USP54Q70EL1 1684 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 ARFGEF1Q9Y6D6 1849 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 LCE2BO14633 110 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 CA12O43570 354 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 LILRA1O75019 489 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 LMNB1P20700 586 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 ECE1P42892 770 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 MAP7D1Q3KQU3 841 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 TSGA10IPQ3SY00 556 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 CYP4F22Q6NT55 531 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 AMIGO3Q86WK7 504 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 NFATC2IPQ8NCF5 419 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 CCDC85AQ96PX6 553 aaPredicted RBP6.72□□□□□ -1.33
SGIP1-214ENST00000497055 PPLO60437 1756 aa6.72□□□□□ -1.33
SGIP1-214ENST00000497055 CCDC7Q96M83 1385 aa6.71□□□□□ -1.33
SGIP1-214ENST00000497055 LY75O60449 1722 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 AOC2O75106 756 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 KCNA3P22001 575 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 CBLBQ13191 982 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 Q6ZVU0 165 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 LDHDQ86WU2 507 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 DDX54Q8TDD1 881 aaKnown RBP6.71□□□□□ -1.34
SGIP1-214ENST00000497055 COL25A1Q9BXS0 654 aaPredicted RBP6.71□□□□□ -1.34
SGIP1-214ENST00000497055 CYLDQ9NQC7 956 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 DOLKQ9UPQ8 538 aa6.71□□□□□ -1.34
SGIP1-214ENST00000497055 THSD7BQ9C0I4 1608 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 PIK3CDO00329 1044 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 ADD1P35611 737 aaKnown RBP6.7□□□□□ -1.34
SGIP1-214ENST00000497055 ERVK-9P63128 1117 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 USP4Q13107 963 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 CC2D2BQ6DHV5 1058 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 PLPP7Q8NBV4 271 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 DACH1Q9UI36 760 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 KIF13BQ9NQT8 1826 aa6.7□□□□□ -1.34
SGIP1-214ENST00000497055 USP47Q96K76 1375 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 KDM6AO15550 1401 aaPredicted RBP6.69□□□□□ -1.34
SGIP1-214ENST00000497055 VPS8Q8N3P4 1428 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 BRCA1P38398 1863 aaKnown RBP6.69□□□□□ -1.34
SGIP1-214ENST00000497055 WASLO00401 505 aaPredicted RBP6.69□□□□□ -1.34
SGIP1-214ENST00000497055 LZTS3O60299 673 aaPredicted RBP6.69□□□□□ -1.34
SGIP1-214ENST00000497055 SKIP12755 728 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 IL2RBP14784 551 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 EAPPQ56P03 285 aaPredicted RBP6.69□□□□□ -1.34
SGIP1-214ENST00000497055 MEIOBQ8N635 442 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 UCN2Q96RP3 112 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 ATP13A2Q9NQ11 1180 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 CCDC87Q9NVE4 849 aa6.69□□□□□ -1.34
SGIP1-214ENST00000497055 C5P01031 1676 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 SZT2Q5T011 3432 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 TIAM2Q8IVF5 1701 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 CEP290O15078 2479 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 UPP2O95045 317 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 MYCP01106 439 aaPredicted RBP6.68□□□□□ -1.34
SGIP1-214ENST00000497055 MAP2K2P36507 400 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 SCTRP47872 440 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 MRPL14Q6P1L8 145 aaKnown RBP6.68□□□□□ -1.34
SGIP1-214ENST00000497055 TBC1D9Q6ZT07 1266 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 TSEN34Q9BSV6 310 aaKnown RBP6.68□□□□□ -1.34
SGIP1-214ENST00000497055 PRDM6Q9NQX0 595 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 NLRP2Q9NX02 1062 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 ACEP12821 1306 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 NSD2O96028 1365 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 ANKRD36BQ8N2N9 1353 aa6.68□□□□□ -1.34
SGIP1-214ENST00000497055 ATP9BO43861 1147 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 DDNO94850 711 aaPredicted RBP6.67□□□□□ -1.34
SGIP1-214ENST00000497055 ADH1AP07327 375 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 BMP1P13497 986 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 CHRNA5P30532 468 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 SCARF1Q14162 830 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 OXLD1Q5BKU9 147 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 TRIM46Q7Z4K8 759 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 LINC00528Q8N1L1 170 aa6.67□□□□□ -1.34
SGIP1-214ENST00000497055 NUDT16Q96DE0 195 aaKnown RBP6.67□□□□□ -1.34
SGIP1-214ENST00000497055 TFIP11Q9UBB9 837 aaKnown RBP6.67□□□□□ -1.34
SGIP1-214ENST00000497055 FAM50AQ14320 339 aaKnown RBP6.66□□□□□ -1.34
SGIP1-214ENST00000497055 MAP1SQ66K74 1059 aaPredicted RBP6.66□□□□□ -1.34
SGIP1-214ENST00000497055 CIAPIN1Q6FI81 312 aa6.66□□□□□ -1.34
SGIP1-214ENST00000497055 AGBL1Q96MI9 1066 aa6.66□□□□□ -1.34
SGIP1-214ENST00000497055 PPP1R12CQ9BZL4 782 aa6.66□□□□□ -1.34
SGIP1-214ENST00000497055 OSBPL3Q9H4L5 887 aa6.66□□□□□ -1.34
SGIP1-214ENST00000497055 SENP2Q9HC62 589 aa6.66□□□□□ -1.34
SGIP1-214ENST00000497055 TOGARAM1Q9Y4F4 1720 aa6.66□□□□□ -1.34
SGIP1-214ENST00000497055 CPSF1Q10570 1443 aaKnown RBP6.66□□□□□ -1.34
SGIP1-214ENST00000497055 NSD3Q9BZ95 1437 aa6.66□□□□□ -1.34
SGIP1-214ENST00000497055 IQCA1LA6NCM1 817 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 PALM3A6NDB9 673 aaPredicted RBP6.65□□□□□ -1.34
SGIP1-214ENST00000497055 USP17L5A8MUK1 530 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 ATP5J2-PTCD1G3V325 749 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 BMP2P12643 396 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 HMGB2P26583 209 aaKnown RBP6.65□□□□□ -1.34
SGIP1-214ENST00000497055 SSFA2P28290 1259 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 PTGIRP43119 386 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 EML3Q32P44 896 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 RGL3Q3MIN7 710 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 CYP2U1Q7Z449 544 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 PLEKHM2Q8IWE5 1019 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 CNTROBQ8N137 903 aa6.65□□□□□ -1.34
SGIP1-214ENST00000497055 KDF1Q8NAX2 398 aaPredicted RBP6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms