RNA–Protein interactions for RNA: ENST00000496840.1

TARDBP-210, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 692 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-210ENST00000496840 PPME1Q9Y570 386 aa11.48□□□□□ -0.57
TARDBP-210ENST00000496840 EREGO14944 169 aa11.47□□□□□ -0.57
TARDBP-210ENST00000496840 CDC27P30260 824 aa11.47□□□□□ -0.57
TARDBP-210ENST00000496840 ADAM19Q9H013 955 aa11.47□□□□□ -0.57
TARDBP-210ENST00000496840 NFKBIEO00221 500 aa11.46□□□□□ -0.57
TARDBP-210ENST00000496840 EDN3P14138 238 aa11.46□□□□□ -0.57
TARDBP-210ENST00000496840 PTPRAP18433 802 aa11.46□□□□□ -0.57
TARDBP-210ENST00000496840 SETDB1Q15047 1291 aa11.46□□□□□ -0.57
TARDBP-210ENST00000496840 TXNRD3Q86VQ6 643 aa11.46□□□□□ -0.57
TARDBP-210ENST00000496840 POP1Q99575 1024 aaKnown RBP11.46□□□□□ -0.57
TARDBP-210ENST00000496840 LACRTQ9GZZ8 138 aa11.46□□□□□ -0.57
TARDBP-210ENST00000496840 SOWAHDA6NJG2 315 aa11.45□□□□□ -0.58
TARDBP-210ENST00000496840 PDE3BQ13370 1112 aa11.45□□□□□ -0.58
TARDBP-210ENST00000496840 ADAMTSL4Q6UY14 1074 aa11.45□□□□□ -0.58
TARDBP-210ENST00000496840 FAM129BQ96TA1 746 aa11.45□□□□□ -0.58
TARDBP-210ENST00000496840 ZFYVE28Q9HCC9 887 aa11.45□□□□□ -0.58
TARDBP-210ENST00000496840 USP21Q9UK80 565 aa11.45□□□□□ -0.58
TARDBP-210ENST00000496840 AMOTL2Q9Y2J4 779 aa11.45□□□□□ -0.58
TARDBP-210ENST00000496840 ACPPP15309 386 aa11.44□□□□□ -0.58
TARDBP-210ENST00000496840 TMEM102Q8N9M5 508 aaPredicted RBP11.44□□□□□ -0.58
TARDBP-210ENST00000496840 ADAM23O75077 832 aa11.43□□□□□ -0.58
TARDBP-210ENST00000496840 FAM177BA6PVY3 158 aa11.42□□□□□ -0.58
TARDBP-210ENST00000496840 PDE2AO00408 941 aaPredicted RBP11.42□□□□□ -0.58
TARDBP-210ENST00000496840 NEFLP07196 543 aa11.42□□□□□ -0.58
TARDBP-210ENST00000496840 DOC2BQ14184 412 aa11.42□□□□□ -0.58
TARDBP-210ENST00000496840 LINC01387J3KSC0 135 aa11.41□□□□□ -0.58
TARDBP-210ENST00000496840 K7ELQ4 463 aaPredicted RBP11.41□□□□□ -0.58
TARDBP-210ENST00000496840 FURINP09958 794 aa11.41□□□□□ -0.58
TARDBP-210ENST00000496840 EPHA1P21709 976 aa11.41□□□□□ -0.58
TARDBP-210ENST00000496840 OSMRQ99650 979 aa11.41□□□□□ -0.58
TARDBP-210ENST00000496840 ZKSCAN3Q9BRR0 538 aa11.41□□□□□ -0.58
TARDBP-210ENST00000496840 MRPL18Q9H0U6 180 aaKnown RBP11.41□□□□□ -0.58
TARDBP-210ENST00000496840 TPSG1Q9NRR2 321 aa11.41□□□□□ -0.58
TARDBP-210ENST00000496840 XP32Q5T750 250 aa11.4□□□□□ -0.58
TARDBP-210ENST00000496840 TM4SF5O14894 197 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 IGHA2P01877 340 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 PEAR1Q5VY43 1037 aaPredicted RBP11.39□□□□□ -0.59
TARDBP-210ENST00000496840 FAM117BQ6P1L5 589 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 TMEM130Q8N3G9 435 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 WFDC12Q8WWY7 111 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 WNT8BQ93098 351 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 NXPE3Q969Y0 559 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 HHIPQ96QV1 700 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 TRAIPQ9BWF2 469 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 RBCK1Q9BYM8 510 aa11.39□□□□□ -0.59
TARDBP-210ENST00000496840 SH2B1Q9NRF2 756 aaPredicted RBP11.39□□□□□ -0.59
TARDBP-210ENST00000496840 H3BRJ5 948 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 TRPA1O75762 1119 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 CABP4P57796 275 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 KCNA1Q09470 495 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 GALNT12Q8IXK2 581 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 KLHL23Q8NBE8 558 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 GALNT11Q8NCW6 608 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 SSBP4Q9BWG4 385 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-210ENST00000496840 BHLHE41Q9C0J9 482 aaPredicted RBP11.38□□□□□ -0.59
TARDBP-210ENST00000496840 SOX13Q9UN79 622 aa11.38□□□□□ -0.59
TARDBP-210ENST00000496840 FSCN2O14926 492 aa11.37□□□□□ -0.59
TARDBP-210ENST00000496840 NOS3P29474 1203 aa11.37□□□□□ -0.59
TARDBP-210ENST00000496840 RSPO4Q2I0M5 234 aaPredicted RBP11.37□□□□□ -0.59
TARDBP-210ENST00000496840 NKAPLQ5M9Q1 402 aa11.37□□□□□ -0.59
TARDBP-210ENST00000496840 TXNDC11Q6PKC3 985 aa11.37□□□□□ -0.59
TARDBP-210ENST00000496840 DMRTB1Q96MA1 342 aa11.37□□□□□ -0.59
TARDBP-210ENST00000496840 CD68P34810 354 aaPredicted RBP11.36□□□□□ -0.59
TARDBP-210ENST00000496840 PIP4K2BP78356 416 aa11.36□□□□□ -0.59
TARDBP-210ENST00000496840 BSNDQ8WZ55 320 aa11.36□□□□□ -0.59
TARDBP-210ENST00000496840 IREB2P48200 963 aaKnown RBP11.35□□□□□ -0.59
TARDBP-210ENST00000496840 ALKBH8Q96BT7 664 aaKnown RBP11.35□□□□□ -0.59
TARDBP-210ENST00000496840 AKTIPQ9H8T0 292 aa11.35□□□□□ -0.59
TARDBP-210ENST00000496840 OSGEPQ9NPF4 335 aa11.35□□□□□ -0.59
TARDBP-210ENST00000496840 SEC31BQ9NQW1 1179 aa11.35□□□□□ -0.59
TARDBP-210ENST00000496840 LATS2Q9NRM7 1088 aa11.35□□□□□ -0.59
TARDBP-210ENST00000496840 F8W735 103 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-210ENST00000496840 GPR182O15218 404 aa11.34□□□□□ -0.59
TARDBP-210ENST00000496840 CPNE3O75131 537 aaKnown RBP11.34□□□□□ -0.59
TARDBP-210ENST00000496840 POLR3DP05423 398 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-210ENST00000496840 FOXD4L6Q3SYB3 417 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-210ENST00000496840 FOXD4L3Q6VB84 417 aaPredicted RBP11.34□□□□□ -0.59
TARDBP-210ENST00000496840 DNAJC25Q9H1X3 360 aa11.34□□□□□ -0.59
TARDBP-210ENST00000496840 H2AFB1P0C5Y9 115 aa11.33□□□□□ -0.6
TARDBP-210ENST00000496840 H2AFB2P0C5Z0 115 aa11.33□□□□□ -0.6
TARDBP-210ENST00000496840 CDC25BP30305 580 aa11.33□□□□□ -0.6
TARDBP-210ENST00000496840 Q6ZS46 218 aa11.33□□□□□ -0.6
TARDBP-210ENST00000496840 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.33□□□□□ -0.6
TARDBP-210ENST00000496840 CARD10Q9BWT7 1032 aa11.33□□□□□ -0.6
TARDBP-210ENST00000496840 BIN2Q9UBW5 565 aaPredicted RBP11.33□□□□□ -0.6
TARDBP-210ENST00000496840 DCTN4Q9UJW0 460 aa11.33□□□□□ -0.6
TARDBP-210ENST00000496840 ORC1Q13415 861 aa11.32□□□□□ -0.6
TARDBP-210ENST00000496840 TMC1Q8TDI8 760 aa11.32□□□□□ -0.6
TARDBP-210ENST00000496840 KRTAP4-8Q9BYQ9 185 aa11.32□□□□□ -0.6
TARDBP-210ENST00000496840 A0A1W2PP55 124 aa11.31□□□□□ -0.6
TARDBP-210ENST00000496840 PATL2C9JE40 543 aaKnown RBP11.31□□□□□ -0.6
TARDBP-210ENST00000496840 KIAA0319Q5VV43 1072 aa11.31□□□□□ -0.6
TARDBP-210ENST00000496840 USPL1Q5W0Q7 1092 aa11.31□□□□□ -0.6
TARDBP-210ENST00000496840 VN1R5Q7Z5H4 357 aa11.31□□□□□ -0.6
TARDBP-210ENST00000496840 KLHDC7BQ96G42 594 aa11.31□□□□□ -0.6
TARDBP-210ENST00000496840 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
TARDBP-210ENST00000496840 DYRK3O43781 588 aa11.3□□□□□ -0.6
TARDBP-210ENST00000496840 CCNJLQ8IV13 435 aa11.3□□□□□ -0.6
TARDBP-210ENST00000496840 DZIP1LQ8IYY4 767 aaKnown RBP11.3□□□□□ -0.6
TARDBP-210ENST00000496840 TP53INP1Q96A56 240 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms